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Elisabeth Margaretha Harbers-Bik (born 1966) is a Dutch microbiologist and
scientific integrity Scientific integrity deals with "best practices" or rules of professional practice of researchers. It stems from an OECD report of 2007, and is set in the context of the replication crisis and the fight against scientific misconduct. Initiatives ...
consultant. Bik is known for her work detecting
photo manipulation Photograph manipulation involves the transformation or alteration of a photograph using various methods and techniques to achieve desired results. Some photograph manipulations are considered to be skillful artwork, while others are consider ...
in scientific publications, and identifying over 4,000 potential cases of improper research conduct, including 400 research papers published by authors in China from a
research paper mill In research, a paper mill is a "profit oriented, unofficial and potentially illegal organisation that produces and sells authorship on research manuscripts. In some cases, paper mills are sophisticated operations that sell authorship positions on ...
company. Bik is the founder of Microbiome Digest, a blog with daily updates on
microbiome A microbiome () is the community of microorganisms that can usually be found living together in any given habitat. It was defined more precisely in 1988 by Whipps ''et al.'' as "a characteristic microbial community occupying a reasonably well ...
research, and the Science Integrity Digest blog. Bik was awarded the 2021
John Maddox Prize The John Maddox Prize is an international prize administered by Sense about Science in partnership with ''Nature''. One or two individuals are recognised annually by the Prize for their work promoting sound science and evidence despite hostility. ...
for "outstanding work exposing widespread threats to research integrity in scientific papers".


Early life and education

Bik was born in the
Netherlands ) , anthem = ( en, "William of Nassau") , image_map = , map_caption = , subdivision_type = Sovereign state , subdivision_name = Kingdom of the Netherlands , established_title = Before independence , established_date = Spanish Netherl ...
. Since childhood, she had a good ability to spot repeating patterns. She studied at the
Utrecht University Utrecht University (UU; nl, Universiteit Utrecht, formerly ''Rijksuniversiteit Utrecht'') is a public research university in Utrecht, Netherlands. Established , it is one of the oldest universities in the Netherlands. In 2018, it had an enrollme ...
, where she obtained her MSc degree and subsequently a PhD in 1996, both in
microbiology Microbiology () is the scientific study of microorganisms, those being unicellular (single cell), multicellular (cell colony), or acellular (lacking cells). Microbiology encompasses numerous sub-disciplines including virology, bacteriology, prot ...
. Her dissertation was about developing vaccines for new strains of ''
Vibrio cholerae ''Vibrio cholerae'' is a species of Gram-negative, facultative anaerobe and comma-shaped bacteria. The bacteria naturally live in brackish or saltwater where they attach themselves easily to the chitin-containing shells of crabs, shrimps, and oth ...
'' involved in
cholera Cholera is an infection of the small intestine by some strains of the bacterium ''Vibrio cholerae''. Symptoms may range from none, to mild, to severe. The classic symptom is large amounts of watery diarrhea that lasts a few days. Vomiting and ...
epidemics across India and Bangladesh. She conducted her doctorate and her postdoctoral studies at the molecular microbiology department in the National Institute of Health and the Environment in
Bilthoven Bilthoven is a village in the Dutch province of Utrecht. It is a part of the municipality of De Bilt. It has a railway station with connections to Utrecht, Amersfoort and Baarn. It is home to the Netherlands National Institute for Public Health an ...
.


Career


Public sector

After receiving her doctorate, Bik worked for the
Netherlands National Institute for Public Health and the Environment The National Institute for Public Health and the Environment ( nl, Rijksinstituut voor Volksgezondheid en Milieu or simply RIVM) is a Dutch research institute that is an independent agency of the Ministry of Health, Welfare and Sport. RIVM perfo ...
and St. Antonius Hospital in
Nieuwegein Nieuwegein () is a municipality and city in the Netherlands, Dutch province of Utrecht (province), Utrecht. It is bordered on the north by the city of Utrecht (city), Utrecht, the provincial capital. It is separated from Vianen to the south by the ...
, where she organized the development of new molecular techniques for identifying infectious agents.


Academia

In 2001, Bik moved to
California California is a U.S. state, state in the Western United States, located along the West Coast of the United States, Pacific Coast. With nearly 39.2million residents across a total area of approximately , it is the List of states and territori ...
to work at
Stanford University Stanford University, officially Leland Stanford Junior University, is a private research university in Stanford, California. The campus occupies , among the largest in the United States, and enrolls over 17,000 students. Stanford is consider ...
in the laboratory of
David Relman David Arnold Relman is an American microbiologist and the Thomas C. and Joan M. Merigan Professor in Medicine, and in Microbiology & Immunology at the Stanford University School of Medicine. His research focuses on the human microbiome and mic ...
, where her work focused on
human microbiome The human microbiome is the aggregate of all microbiota that reside on or within human tissues and biofluids along with the corresponding anatomical sites in which they reside, including the skin, mammary glands, seminal fluid, uterus, ovarian ...
s, previously unidentified microbial species in them, and their diversity across individuals. Her work explored other
mucosal A mucous membrane or mucosa is a membrane that lines various cavities in the body of an organism and covers the surface of internal organs. It consists of one or more layers of epithelial cells overlying a layer of loose connective tissue. It is ...
microbiome A microbiome () is the community of microorganisms that can usually be found living together in any given habitat. It was defined more precisely in 1988 by Whipps ''et al.'' as "a characteristic microbial community occupying a reasonably well ...
s, confirming that the human
oral microbiota Oral microbiology is the study of the microorganisms (microbiota) of the oral cavity and their interactions between oral microorganisms or with the host. The environment present in the human mouth is suited to the growth of characteristic microo ...
contains distinct genera from the
gut microbiota Gut microbiota, gut microbiome, or gut flora, are the microorganisms, including bacteria, archaea, fungi, and viruses that live in the digestive tracts of animals. The gastrointestinal metagenome is the aggregate of all the genomes of the gut m ...
. While at Stanford, Bik worked on an
Office of Naval Research The Office of Naval Research (ONR) is an organization within the United States Department of the Navy responsible for the science and technology programs of the U.S. Navy and Marine Corps. Established by Congress in 1946, its mission is to plan ...
project to study the microbiome of dolphins and
sea lion Sea lions are pinnipeds characterized by external ear flaps, long foreflippers, the ability to walk on all fours, short and thick hair, and a big chest and belly. Together with the fur seals, they make up the family Otariidae, eared seals. ...
s in
San Diego San Diego ( , ; ) is a city on the Pacific Ocean coast of Southern California located immediately adjacent to the Mexico–United States border. With a 2020 population of 1,386,932, it is the List of United States cities by population, eigh ...
. She found that their microbiome was distinct from other mammals, and influenced by the sea they lived in.


Private sector

In 2016, Bik left Stanford to work for
uBiome uBiome, Inc. was a biotechnology company based in San Francisco that developed technology to sequence the human microbiome. Its main product analyzed gut microbes in patients with long-term intestinal disorders. Founded in 2012, the company ...
, a biotech company involved in the sequencing of human microbiomes, before leaving the company in 2018 to work full-time on analyzing scientific papers for image duplication and other malpractices.


Science integrity

Bik started to focus on science integrity in 2013, when she discovered that one of her publications had been plagiarised. One evening in January 2014, she found duplicated images with manipulations in papers from
Case Western Reserve University School of Medicine Case Western Reserve School of Medicine (CWRU SOM, CaseMed) is the medical school of Case Western Reserve University, a private research university in Cleveland, Ohio. It is the largest biomedical research center in Ohio. History On November 1 ...
. She decided to dedicate her free time to looking for questionable practices in scientific publications, and specialized in tracking down image manipulation in studies. In 2014, she started the blog ''Microbiome Digest'', where she provided easy-to-understand commentaries on recent scientific papers. The blog soon became a success, and Bik enlisted help from her colleagues on Twitter to manage the content. She is also an active contributor to
Retraction Watch Retraction Watch is a blog that reports on retractions of scientific papers and on related topics. The blog was launched in August 2010 and is produced by science writers Ivan Oransky (Former Vice President, Editorial ''Medscape'') and Adam Mar ...
and
PubPeer PubPeer is a website that allows users to discuss and review scientific research after publication, i.e. post-publication peer review. The site has served as a whistleblowing platform, in that it highlighted shortcomings in several high-profile ...
, highlighting scientific papers that present falsified, duplicated, and questionable data, such as in
western blot The western blot (sometimes called the protein immunoblot), or western blotting, is a widely used analytical technique in molecular biology and immunogenetics to detect specific proteins in a sample of tissue homogenate or extract. Besides detect ...
images. Together with Arturo Casadevall and
Ferric Fang Ferric C. Fang is an American microbiologist. He is a Professor of Laboratory Medicine, Pathology, and Microbiology at the University of Washington School of Medicine, as well as the director of the Harborview Medical Center's Clinical Microbiolo ...
, Bik published an
mBio ''mBio'' is a bimonthly peer-reviewed open access scientific journal published by the American Society for Microbiology in association with the American Academy of Microbiology. It covers all aspects of the microbiological sciences, including vir ...
paper investigating the prevalence of these questionable practices within published scientific papers, where they found nearly 400 papers with intentional figure manipulation (i.e. about 800 duplicate images). She estimates half of these were created with the intention to mislead. Bik is active on
Twitter Twitter is an online social media and social networking service owned and operated by American company Twitter, Inc., on which users post and interact with 280-character-long messages known as "tweets". Registered users can post, like, and ...
, where she posts potentially duplicated figures for her more than 114,000 followers () to investigate. Her investigations have exposed significant levels of scientific misconduct in several journals. In 2018, Bik was featured on the pop science
podcast A podcast is a program made available in digital format for download over the Internet. For example, an episodic series of digital audio or video files that a user can download to a personal device to listen to at a time of their choosing ...
"Everything Hertz." In 2019, Bik announced via Twitter that she was taking a year off paid work to investigate scientific misconduct, the subject on which she co-authored a preregistered test suggesting that "academic culture, peer control, cash-based publication incentives and national misconduct policies", but not pressure to publish, may affect scientific integrity, with nationality being a stronger predictor than individual attributes. Her analysis of 960 recent papers published in ''
Molecular and Cellular Biology ''Molecular and Cellular Biology'' is a biweekly peer-reviewed scientific journal covering all aspects of molecular and cellular biology. It is published by the American Society for Microbiology and the editor-in-chief is Peter Tontonoz (University ...
'' found that 59 (6.1%) contained inappropriately duplicated images, from which 5 papers were subsequently retracted and 41 papers had corrections published, and led to a pilot image screening program at the journal identifying problems with 14.5% of subsequent submissions. In February 2020, ''
Science Science is a systematic endeavor that builds and organizes knowledge in the form of testable explanations and predictions about the universe. Science may be as old as the human species, and some of the earliest archeological evidence for ...
'' reported that Bik had identified over 400 research papers published in China over the previous three years, apparently all originating from the same research paper mill company providing full service production of articles describing fake research for medical students on demand. Bik said, "students in China need to have a paper published to get their MD, but they do not have time to do research, so that is an unrealistic goal." In March 2020, commenting on the publication of the results of a clinical trial by
Didier Raoult Didier Raoult (; born 13 March 1952) is a retired French physician and microbiologist specialising in infectious diseases. He taught about infectious diseases at the Faculty of Medicine of Aix-Marseille University (AMU), and in 1984, created the ...
on the effect of
hydroxychloroquine Hydroxychloroquine, sold under the brand name Plaquenil among others, is a medication used to prevent and treat malaria in areas where malaria remains sensitive to chloroquine. Other uses include treatment of rheumatoid arthritis, lupus, an ...
against
COVID-19 Coronavirus disease 2019 (COVID-19) is a contagious disease caused by a virus, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The first known case was COVID-19 pandemic in Hubei, identified in Wuhan, China, in December ...
, she identified a
conflict of interest A conflict of interest (COI) is a situation in which a person or organization is involved in multiple interests, financial or otherwise, and serving one interest could involve working against another. Typically, this relates to situations i ...
and strongly criticized the methodology of the study. The owners of the journal that published the results admitted that the publication was not at the level expected by the society, in particular due to a lack of justification of the criteria for patient selection and triage. They then rebutted allegations of a conflict of interest, stating that the peer review process prior to publication was respected because Jean-Marc Rolain, one of the co-authors of the article and editor of the journal, did not participate in the evaluation. The publisher
Elsevier Elsevier () is a Dutch academic publishing company specializing in scientific, technical, and medical content. Its products include journals such as ''The Lancet'', ''Cell'', the ScienceDirect collection of electronic journals, '' Trends'', th ...
then announced an additional independent evaluation to determine whether the concerns about the article were well founded. On May 5, 2021, the French non profit association Citizen4Science, made up of scientists and citizens, published a press release in response to an announcement by Didier Raoult's lawyer that IHU Marseille was suing Bik. Citizen4Science linked a petition denouncing the harassment of scientists and defenders of science integrity, specifically mentioning Bik and calling on French authorities to intervene and journalists to look into the matter. On May 8, 2021, Lonni Besançon, a French postdoctoral research fellow at
Monash University Monash University () is a public research university based in Melbourne, Victoria, Australia. Named for prominent World War I general Sir John Monash, it was founded in 1958 and is the second oldest university in the state. The university has a ...
, also wrote an open letter signed by scientists to support Bik. The letter, also mentioned in ''The Guardian'', ''Science'', and ''
Nature Nature, in the broadest sense, is the physics, physical world or universe. "Nature" can refer to the phenomenon, phenomena of the physical world, and also to life in general. The study of nature is a large, if not the only, part of science. ...
'', gathered signatures from more than 2,200 scientists and 30
scholarly societies A learned society (; also learned academy, scholarly society, or academic association) is an organization that exists to promote an academic discipline, profession, or a group of related disciplines such as the arts and science. Membership may ...
. On May 22, 2021, ''
The Guardian ''The Guardian'' is a British daily newspaper. It was founded in 1821 as ''The Manchester Guardian'', and changed its name in 1959. Along with its sister papers ''The Observer'' and ''The Guardian Weekly'', ''The Guardian'' is part of the Gu ...
'' reported that Raoult had begun legal proceedings against Bik. A ''Science'' article updated on June 4, 2021, in print issue 6546, stated that more than 3,000 signatories supported the Citizen4Science petition. In September 2021, Bik discovered repetitive elements in published images that indicated digital tampering by authors of a paper by the controversial
Comet Research Group The Comet Research Group, Inc. (also known as the CRG) is non-profit organization whose members promote their research focused on cosmic impact events or meteor air bursts on Earth in the distant past, including events of biblical significance. ...
claiming the discovery of the Biblical Sodom, and evidence that it had been destroyed by a cosmic airburst. The authors initially denied tampering with the photos but eventually published a correction in which they admitted to inappropriate image manipulation. On February 15, 2023, the following editor’s note was posted on this paper, "Readers are alerted that concerns raised about the data presented and the conclusions of this article are being considered by the Editors. A further editorial response will follow the resolution of these issues". During a session of the 2022 European Hematology Association Congress, Bik presented information about
artificial intelligence Artificial intelligence (AI) is intelligence—perceiving, synthesizing, and inferring information—demonstrated by machines, as opposed to intelligence displayed by animals and humans. Example tasks in which this is done include speech re ...
being used to fraudulently generate
Western blot The western blot (sometimes called the protein immunoblot), or western blotting, is a widely used analytical technique in molecular biology and immunogenetics to detect specific proteins in a sample of tissue homogenate or extract. Besides detect ...
images.


Awards

*In July 2023, Bik received the Association for Interdisciplinary Meta-Research and Open Science commendation award. *In November 2020, Bik was awarded the
Peter Wildy Norman Peter Leete Wildy (31 March 1920 – 10 March 1987) was a 20th-century British virologist who was an expert on the herpes simplex virus. Education and personal life He was born in Tunbridge Wells in Kent on 31 March 1920 the son of Eric ...
Prize by the
Microbiology Society The Microbiology Society (previously the Society for General Microbiology) is a learned society based in the United Kingdom with a worldwide membership based in universities, industry, hospitals, research institutes and schools. It is the large ...
for communication of microbiology in education and to the public. *Bik was awarded the 2021
John Maddox Prize The John Maddox Prize is an international prize administered by Sense about Science in partnership with ''Nature''. One or two individuals are recognised annually by the Prize for their work promoting sound science and evidence despite hostility. ...
for "outstanding work exposing widespread threats to research integrity in scientific papers". *Bik was awarded the 2021 Ockham Award for Skeptical Activism by '' The Skeptic'' magazine.


References


External links


Microbiome Digest
blog
Science Integrity Digest
blog * * {{DEFAULTSORT:Bik, Elisabeth 1966 births Living people Dutch whistleblowers Dutch microbiologists Scientific misconduct Utrecht University alumni