Diagnostic Odds Ratio
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In
medical test A medical test is a medical procedure performed to detect, diagnose, or monitor diseases, disease processes, susceptibility, or to determine a course of treatment. Medical tests such as, physical and visual exams, diagnostic imaging, genetic te ...
ing with
binary classification Binary classification is the task of classifying the elements of a set into two groups (each called ''class'') on the basis of a classification rule. Typical binary classification problems include: * Medical testing to determine if a patient has c ...
, the diagnostic odds ratio (DOR) is a measure of the effectiveness of a
diagnostic test A medical test is a medical procedure performed to detect, diagnose, or monitor diseases, disease processes, susceptibility, or to determine a course of treatment. Medical tests such as, physical and visual exams, diagnostic imaging, genetic ...
. It is defined as the ratio of the odds of the test being positive if the subject has a disease relative to the odds of the test being positive if the subject does not have the disease. The rationale for the diagnostic odds ratio is that it is a single indicator of test performance (like
accuracy Accuracy and precision are two measures of ''observational error''. ''Accuracy'' is how close a given set of measurements (observations or readings) are to their ''true value'', while ''precision'' is how close the measurements are to each other ...
and
Youden's J statistic Youden's J statistic (also called Youden's index) is a single statistic that captures the performance of a dichotomous diagnostic test. Informedness is its generalization to the multiclass case and estimates the probability of an informed decision ...
) but which is independent of
prevalence In epidemiology, prevalence is the proportion of a particular population found to be affected by a medical condition (typically a disease or a risk factor such as smoking or seatbelt use) at a specific time. It is derived by comparing the number o ...
(unlike accuracy) and is presented as an
odds ratio An odds ratio (OR) is a statistic that quantifies the strength of the association between two events, A and B. The odds ratio is defined as the ratio of the odds of A in the presence of B and the odds of A in the absence of B, or equivalently (due ...
, which is familiar to medical practitioners.


Definition

The diagnostic odds ratio is defined mathematically as: :\text = \frac = \frac = \frac where TP, FN, FP and TN are the number of true positives, false negatives, false positives and true negatives respectively.


Confidence interval

As with the
odds ratio An odds ratio (OR) is a statistic that quantifies the strength of the association between two events, A and B. The odds ratio is defined as the ratio of the odds of A in the presence of B and the odds of A in the absence of B, or equivalently (due ...
, the
logarithm In mathematics, the logarithm is the inverse function to exponentiation. That means the logarithm of a number  to the base  is the exponent to which must be raised, to produce . For example, since , the ''logarithm base'' 10 o ...
of the diagnostic odds ratio is approximately normally distributed. The
standard error The standard error (SE) of a statistic (usually an estimate of a parameter) is the standard deviation of its sampling distribution or an estimate of that standard deviation. If the statistic is the sample mean, it is called the standard error ...
of the log diagnostic odds ratio is approximately: :\mathrm\left(\ln\right) = \sqrt From this an approximate 95%
confidence interval In frequentist statistics, a confidence interval (CI) is a range of estimates for an unknown parameter. A confidence interval is computed at a designated ''confidence level''; the 95% confidence level is most common, but other levels, such as 9 ...
can be calculated for the log diagnostic odds ratio: :\ln \pm 1.96 \times \mathrm\left(\ln\right)
Exponentiation Exponentiation is a mathematical operation, written as , involving two numbers, the '' base'' and the ''exponent'' or ''power'' , and pronounced as " (raised) to the (power of) ". When is a positive integer, exponentiation corresponds to re ...
of the approximate confidence interval for the log diagnostic odds ratio gives the approximate confidence interval for the diagnostic odds ratio.


Interpretation

The diagnostic odds ratio ranges from zero to infinity, although for useful tests it is greater than one, and higher diagnostic odds ratios are indicative of better test performance. Diagnostic odds ratios less than one indicate that the test can be improved by simply inverting the outcome of the test – the test is in the wrong direction, while a diagnostic odds ratio of exactly one means that the test is equally likely to predict a positive outcome whatever the true condition – the test gives no information.


Relation to other measures of diagnostic test accuracy

The diagnostic odds ratio may be expressed in terms of the
sensitivity and specificity ''Sensitivity'' and ''specificity'' mathematically describe the accuracy of a test which reports the presence or absence of a condition. Individuals for which the condition is satisfied are considered "positive" and those for which it is not are ...
of the test: :\text = \frac It may also be expressed in terms of the
Positive predictive value The positive and negative predictive values (PPV and NPV respectively) are the proportions of positive and negative results in statistics and diagnostic tests that are true positive and true negative results, respectively. The PPV and NPV descr ...
(PPV) and
Negative predictive value The positive and negative predictive values (PPV and NPV respectively) are the proportions of positive and negative results in statistics and diagnostic tests that are true positive and true negative results, respectively. The PPV and NPV descr ...
(NPV): :\text = \frac It is also related to the likelihood ratios, LR+ and LR-: :\text = \frac


Uses

The log diagnostic odds ratio is sometimes used in meta-analyses of diagnostic test accuracy studies due to its simplicity (being approximately normally distributed). Traditional
meta-analytic A meta-analysis is a statistical analysis that combines the results of multiple Randomized controlled trial, scientific studies. Meta-analyses can be performed when there are multiple scientific studies addressing the same question, with each ...
techniques such as
inverse-variance weighting In statistics, inverse-variance weighting is a method of aggregating two or more random variables to minimize the variance of the weighted average. Each random variable is weighted in inverse proportion to its variance, i.e. proportional to its prec ...
can be used to combine log diagnostic odds ratios computed from a number of data sources to produce an overall diagnostic odds ratio for the test in question. The log diagnostic odds ratio can also be used to study the trade-off between sensitivity and specificity by expressing the log diagnostic odds ratio in terms of the
logit In statistics, the logit ( ) function is the quantile function associated with the standard logistic distribution. It has many uses in data analysis and machine learning, especially in data transformations. Mathematically, the logit is the ...
of the true positive rate (sensitivity) and false positive rate (1 − specificity), and by additionally constructing a measure, S: :D = \log = \log = \operatorname(TPR) - \operatorname(FPR) :S = \operatorname(TPR) + \operatorname(FPR) It is then possible to fit a straight line, D = a + bS. If b ≠ 0 then there is a trend in diagnostic performance with threshold beyond the simple trade-off of sensitivity and specificity. The value a can be used to plot a summary ROC (SROC) curve.


Example

Consider a test with the following 2×2
confusion matrix In the field of machine learning and specifically the problem of statistical classification, a confusion matrix, also known as an error matrix, is a specific table layout that allows visualization of the performance of an algorithm, typically a su ...
: We calculate the diagnostic odds ratio as: :\text = \frac = \frac = 34.666\ldots \approx 35 This diagnostic odds ratio is greater than one, so we know that the test is discriminating correctly. We compute the confidence interval for the diagnostic odds ratio of this test as , 134


Criticisms

The diagnostic odds ratio is undefined when the number of false negatives ''or'' false positives is zero – if both false negatives ''and'' false positives are zero, then the test is perfect, but if only one is, this ratio does not give a usable measure. The typical response to such a scenario is to add 0.5 to all cells in the contingency table, although this should not be seen as a correction as it introduces a bias to results. It is suggested that the adjustment is made to all contingency tables, even if there are no cells with zero entries.


See also

*
Sensitivity and specificity ''Sensitivity'' and ''specificity'' mathematically describe the accuracy of a test which reports the presence or absence of a condition. Individuals for which the condition is satisfied are considered "positive" and those for which it is not are ...
*
Binary classification Binary classification is the task of classifying the elements of a set into two groups (each called ''class'') on the basis of a classification rule. Typical binary classification problems include: * Medical testing to determine if a patient has c ...
*
Positive predictive value The positive and negative predictive values (PPV and NPV respectively) are the proportions of positive and negative results in statistics and diagnostic tests that are true positive and true negative results, respectively. The PPV and NPV descr ...
and
negative predictive value The positive and negative predictive values (PPV and NPV respectively) are the proportions of positive and negative results in statistics and diagnostic tests that are true positive and true negative results, respectively. The PPV and NPV descr ...
*
Odds ratio An odds ratio (OR) is a statistic that quantifies the strength of the association between two events, A and B. The odds ratio is defined as the ratio of the odds of A in the presence of B and the odds of A in the absence of B, or equivalently (due ...


References


Further reading

* * *


External links

* {{YouTube, lG4VkPoG3ko, Why Bayes rule is nicer with odds Epidemiology Biostatistics Medical statistics Statistical ratios Summary statistics for contingency tables