The Computational Biology Department (CBD) is a division within the School of Computer Science at Carnegie Mellon University in

Pittsburgh Pittsburgh ( ) is a city in the Commonwealth of Pennsylvania, United States, and the county seat of Allegheny County. It is the most populous city in both Allegheny County and Western Pennsylvania, the second-most populous city in Pennsylva ...

Pennsylvania Pennsylvania (; ( Pennsylvania Dutch: )), officially the Commonwealth of Pennsylvania, is a state spanning the Mid-Atlantic, Northeastern, Appalachian, and Great Lakes regions of the United States. It borders Delaware to its southeast, ...

United States The United States of America (U.S.A. or USA), commonly known as the United States (U.S. or US) or America, is a country primarily located in North America. It consists of 50 states, a federal district, five major unincorporated territori ...

. It is located in the Gates-Hillman Center. Established in 2007 by Robert F. Murphy as the Lane Center for Computational Biology with funding from Raymond J. Lane and Stephanie Lane, CBD became a department within the School of Computer Science in 2016. CBD faculty and students conduct research in genomics, systems biology, and

biological imaging Biological imaging may refer to any imaging technique used in biology. Typical examples include: * Bioluminescence imaging, a technique for studying laboratory animals using luminescent protein * Calcium imaging, determining the calcium status of a ...

. Its faculty have served as president of the

National Science Foundation The National Science Foundation (NSF) is an independent agency of the United States government that supports fundamental research and education in all the non-medical fields of science and engineering. Its medical counterpart is the National ...

, president of the International Society of Advanced Cytometry, and as a member of the

National Institutes of Health The National Institutes of Health, commonly referred to as NIH (with each letter pronounced individually), is the primary agency of the United States government responsible for biomedical and public health research. It was founded in the late ...

Council of Councils; they have won awards such as the

Overton Prize The ISCB Overton Prize is a computational biology prize awarded annually for outstanding accomplishment by a scientist in the early to mid stage of his or her career. Laureates have made significant contribution to the field of computational biolo ...

, a Guggenheim Fellowship, th
Okawa Award
a

United States Air Force The United States Air Force (USAF) is the Aerial warfare, air military branch, service branch of the United States Armed Forces, and is one of the eight uniformed services of the United States. Originally created on 1 August 1907, as a part ...

Young Investigator Award, and a

Presidential Young Investigator Award The Presidential Young Investigator Award (PYI) was awarded by the National Science Foundation of the United States Federal Government. The program operated from 1984 to 1991, and was replaced by the NSF Young Investigator (NYI) Awards and Presiden ...

. As part of the HHMI-NIBIB Interfaces Initiative, CBD received funding from Howard Hughes Medical Institute and the

National Institute of Biomedical Imaging and Bioengineering The National Institute of Biomedical Imaging and Bioengineering (NIBIB), founded at the National Institutes of Health (NIH) in 2000, is located in Bethesda, Maryland. It is one of 27 institutes and centers that are part of NIH, an agency of the U ...

(NIBIB) to develop an interdisciplinary Ph.D. program in computational biology with the

University of Pittsburgh The University of Pittsburgh (Pitt) is a public state-related research university in Pittsburgh, Pennsylvania. The university is composed of 17 undergraduate and graduate schools and colleges at its urban Pittsburgh campus, home to the univers ...

, which was founded as the

Joint CMU-Pitt Ph.D. Program in Computational Biology The Joint CMU-Pitt Ph.D Program in Computational Biology (CPCB) is an interdisciplinary graduate training program in computational biology. It is a joint program between Carnegie Mellon University and the University of Pittsburgh in Pittsburgh ...

in 2005. This program is currently receiving training support through a National Institutes of Health T32 Training Grant. CBD is the home of the B.S. in Computational Biology, one of the four B.S. degree programs within

Carnegie Mellon School of Computer Science The School of Computer Science (SCS) at Carnegie Mellon University in Pittsburgh, Pennsylvania, US is a school for computer science established in 1988. It has been consistently ranked among the top computer science programs over the decades. ...

. The Computational Biology undergraduate program is ranked as one of the top 3 programs by US News. CBD is the home of an NIH Center for the HuBMAP Integration, Visualization & Engaging (HIVE) Initiative led by Ziv Bar-Joseph and an NIH Center for Multiscale Analysis of 4D Nucleome Structure and Function by Comprehensive Multimodal Data Integration led by Jian Ma.

Notable faculty

* Robert F. Murphy (founding chair) * Russell Schwartz (chair) * Ziv Bar-Joseph *

Jaime Carbonell Jaime Guillermo Carbonell (July 29, 1953 – February 28, 2020) was a computer scientist who made seminal contributions to the development of natural language processing tools and technologies. His extensive research in machine translation resul ...

* Jian Ma * Kathryn Roeder *

Roni Rosenfeld Roni Rosenfeld is an Israeli-American computer scientist and Computational epidemiology, computational epidemiologist, currently serving as the head of thMachine Learning Departmentat Carnegie Mellon University. He is an international expert in ma ...

* Eric Xing

Notable meetings hosted

* RECOMB 2014 * Great Lakes Bioinformatics Conference 2013 (joint with University of Pittsburgh) * Automated Personal Genome Analysis (APGA) 2013 * Bioimage Informatics 2010

Degree programs

* Joint CMU-Pitt Ph.D. Program in Computational Biology (with

) * M.S. in Computational Biology (joint with the Department of Biological Sciences) * M.S. in Biotechnology Innovation and Computation (joint with

Language Technologies Institute The Language Technologies Institute (LTI) is a research institute at Carnegie Mellon University in Pittsburgh, Pennsylvania, United States, and focuses on the area of language technologies. The institute is home to 33 faculty with the primary scho ...

) * B.S. in Computational Biology * Minor in Computational Biology

References

{{Carnegie Mellon, state=uncollapsed Schools and departments of Carnegie Mellon University departments in the United States Bioinformatics organizations Organizations established in 2007 2007 establishments in Pennsylvania