CARET (Computerized Anatomical Reconstruction Toolkit) is a software application for the structural and functional analysis of the cerebral and cerebellar cortex. CARET is developed in the Van Essen Laboratory in the Department of Anatomy and Neurobiology at the
Washington University School of Medicine
Washington University School of Medicine (WashU Medicine) is the medical school of Washington University in St. Louis, located in the Central West End neighborhood of St. Louis, Missouri. Founded in 1891, the School of Medicine shares a ca ...
in
St. Louis, Missouri
St. Louis ( , sometimes referred to as St. Louis City, Saint Louis or STL) is an Independent city (United States), independent city in the U.S. state of Missouri. It lies near the confluence of the Mississippi River, Mississippi and the Miss ...
.
CARET is a free, open-source application distributed in both binary and source formats under the
GNU General Public License
The GNU General Public Licenses (GNU GPL or simply GPL) are a series of widely used free software licenses, or ''copyleft'' licenses, that guarantee end users the freedom to run, study, share, or modify the software. The GPL was the first ...
. CARET runs on
FreeBSD
FreeBSD is a free-software Unix-like operating system descended from the Berkeley Software Distribution (BSD). The first version was released in 1993 developed from 386BSD, one of the first fully functional and free Unix clones on affordable ...
,
Linux
Linux ( ) is a family of open source Unix-like operating systems based on the Linux kernel, an kernel (operating system), operating system kernel first released on September 17, 1991, by Linus Torvalds. Linux is typically package manager, pac ...
,
Mac OS X
macOS, previously OS X and originally Mac OS X, is a Unix, Unix-based operating system developed and marketed by Apple Inc., Apple since 2001. It is the current operating system for Apple's Mac (computer), Mac computers. With ...
, and
Microsoft Windows
Windows is a Product lining, product line of Proprietary software, proprietary graphical user interface, graphical operating systems developed and marketed by Microsoft. It is grouped into families and subfamilies that cater to particular sec ...
.
CARET's capabilities
* Analysis of group anatomical differences using sulcal depth morphometry.
* Display of activation foci.
* Generation of flat, inflated, spherical surfaces.
* Mapping of
fMRI
Functional magnetic resonance imaging or functional MRI (fMRI) measures brain activity by detecting changes associated with blood flow. This technique relies on the fact that cerebral blood flow and neuronal activation are coupled. When an area o ...
volumes onto surfaces.
* Surface reconstruction from anatomical
MRI
Magnetic resonance imaging (MRI) is a medical imaging technique used in radiology to generate pictures of the anatomy and the physiological processes inside the body. MRI scanners use strong magnetic fields, magnetic field gradients, and rad ...
volumes using the SureFit algorithm.
* Surface reconstruction from contours.
* Surface-based registration.
* Visualization of contours, surfaces, and volumes.
Related Software
SuMS Database and WebCaretprovided on-line storage of surface and volume-based data along with web-based visualization of the data.
See also
*
AFNI
*
FMRIB Software Library
*
FreeSurfer
*
Computational anatomy toolbox
CAT (computational anatomy toolbox) is a free and open source software package used for the analysis of structural brain imaging data, in particular magnetic resonance imaging (MRI). Developed by Christian Gaser and Robert Dahnke of the Structu ...
*
Neuroimaging
Neuroimaging is the use of quantitative (computational) techniques to study the neuroanatomy, structure and function of the central nervous system, developed as an objective way of scientifically studying the healthy human brain in a non-invasive ...
*
Neuroinformatics
Neuroinformatics is the emergent field that combines informatics and neuroscience. Neuroinformatics is related with neuroscience data and information processing by artificial neural networks. There are three main directions where neuroinformatics ...
References
*
External links
CARET Home Page
Computational neuroscience
Medical imaging
Neuroimaging software
Washington University in St. Louis
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