Actinomyces Slackii
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''Actinomyces'' is a genus of the Actinomycetia class of bacteria. They all are gram-positive. ''Actinomyces'' species are facultatively anaerobic and they grow best under anaerobic conditions. ''Actinomyces'' species may form
endospore An endospore is a dormant, tough, and non-reproductive structure produced by some bacteria in the phylum Bacillota. The name "endospore" is suggestive of a spore or seed-like form (''endo'' means 'within'), but it is not a true spore (i.e., no ...
s, and while individual bacteria are
rod-shaped A bacillus (), also called a bacilliform bacterium or often just a rod (when the context makes the sense clear), is a rod-shaped bacterium or archaeon. Bacilli are found in many different taxonomic groups of bacteria. However, the name ''Bacillu ...
, ''Actinomyces'' colonies form fungus-like branched networks of
hypha A hypha (; ) is a long, branching, filamentous structure of a fungus, oomycete, or actinobacterium. In most fungi, hyphae are the main mode of vegetative growth, and are collectively called a mycelium. Structure A hypha consists of one or ...
e. The aspect of these colonies initially led to the incorrect assumption that the organism was a fungus and to the name ''Actinomyces'', "ray fungus" (from Greek , ray or beam, and , fungus). ''Actinomyces'' species are
ubiquitous Omnipresence or ubiquity is the property of being present anywhere and everywhere. The term omnipresence is most often used in a religious context as an attribute of a deity or supreme being, while the term ubiquity is generally used to describe ...
, occurring in soil and in the
microbiota Microbiota are the range of microorganisms that may be commensal, symbiotic, or pathogenic found in and on all multicellular organisms, including plants. Microbiota include bacteria, archaea, protists, fungi, and viruses, and have been found t ...
of animals, including the human microbiota. They are known for the important role they play in soil ecology; they produce a number of enzymes that help degrade organic plant material,
lignin Lignin is a class of complex organic polymers that form key structural materials in the support tissues of most plants. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity ...
, and
chitin Chitin ( C8 H13 O5 N)n ( ) is a long-chain polymer of ''N''-acetylglucosamine, an amide derivative of glucose. Chitin is probably the second most abundant polysaccharide in nature (behind only cellulose); an estimated 1 billion tons of chit ...
. Thus, their presence is important in the formation of
compost Compost is a mixture of ingredients used as plant fertilizer and to improve soil's physical, chemical and biological properties. It is commonly prepared by decomposing plant, food waste, recycling organic materials and manure. The resulting m ...
. Certain species are commensal in the
skin flora Skin flora, also called skin microbiota, refers to microbiota (communities of microorganisms) that reside on the skin, typically human skin. Many of them are bacteria of which there are around 1,000 species upon human skin from nineteen phyla.P ...
,
oral flora Oral microbiology is the study of the microorganisms (microbiota) of the oral cavity and their interactions between oral microorganisms or with the host. The environment present in the human mouth is suited to the growth of characteristic microo ...
,
gut flora Gut microbiota, gut microbiome, or gut flora, are the microorganisms, including bacteria, archaea, fungi, and viruses that live in the digestive tracts of animals. The gastrointestinal metagenome is the aggregate of all the genomes of the gut mi ...
, and vaginal flora of humans and livestock. They are also known for causing diseases in humans and livestock, usually when they opportunistically gain access to the body's interior through
wound A wound is a rapid onset of injury that involves laceration, lacerated or puncture wound, punctured skin (an ''open'' wound), or a bruise, contusion (a ''closed'' wound) from blunt force physical trauma, trauma or compression. In pathology, a '' ...
s. As with other
opportunistic infection An opportunistic infection is an infection caused by pathogens (bacteria, fungi, parasites or viruses) that take advantage of an opportunity not normally available. These opportunities can stem from a variety of sources, such as a weakened immune ...
s, people with
immunodeficiency Immunodeficiency, also known as immunocompromisation, is a state in which the immune system's ability to fight infectious diseases and cancer is compromised or entirely absent. Most cases are acquired ("secondary") due to extrinsic factors that a ...
are at higher risk. In all of the preceding traits and in their branching filament formation, they bear similarities to ''
Nocardia ''Nocardia'' is a genus of weakly staining Gram-positive, catalase-positive, rod-shaped bacteria. It forms partially acid-fast beaded branching filaments (acting as fungi, but being truly bacteria). It contains a total of 85 species. Some spec ...
''. Like various other anaerobes, ''Actinomyces'' species are fastidious, thus not easy to culture and
isolate Isolate may refer to: Arts, entertainment, and media * ''Isolate'' (film), a 2013 Australian film * ''Isolate'' (Circus Maximus album), 2007 * ''Isolate'' (Gary Numan album), 1992 Language * Isolating language, with near-unity morpheme/word ...
. Clinical laboratories do culture and isolate them, but a negative result does not rule out infection, because it may be due simply to reluctance to grow '' in vitro''.


Genomics

Phylogenetic trees based on
16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The genes coding for it are referred to as 16S rRNA ...
(16SrRNA) sequences have shown that the genus ''Actinomyces'' is quite diverse, exhibiting polyphyletic branching into several clusters. The genera ''Actinomyces'' and ''
Mobiluncus ''Mobiluncus'' is a genus of Gram-positive, anaerobic, rod-shaped bacteria. These bacteria may be stained either Gram-negative or Gram-variable. However, they are classified as Gram-positive rods due to the fact that they possess a Gram-positive ...
'' form a monophyletic clade in a phylogenetic tree constructed using RpoB, RpoC, and DNA gyrase B protein sequences. This clade is also strongly supported by a conserved signature indel consisting of a three-amino-acid insertion in isoleucine tRNA synthetase found only in the species of the genera ''Actinomyces'' and ''Mobiluncus''.


Pathology

Actinomycota are normally present in the gums, and are the most common cause of infection in dental procedures and oral abscesses. Many ''Actinomyces'' species are opportunistic pathogens of humans and other mammals, particularly in the oral cavity. In rare cases, these bacteria can cause actinomycosis, a disease characterized by the formation of
abscess An abscess is a collection of pus that has built up within the tissue of the body. Signs and symptoms of abscesses include redness, pain, warmth, and swelling. The swelling may feel fluid-filled when pressed. The area of redness often extends b ...
es in the mouth, lungs, or the
gastrointestinal tract The gastrointestinal tract (GI tract, digestive tract, alimentary canal) is the tract or passageway of the digestive system that leads from the mouth to the anus. The GI tract contains all the major organ (biology), organs of the digestive syste ...
. Actinomycosis is most frequently caused by ''A. israelii'', which may also cause endocarditis, though the resulting symptoms may be similar to those resulting from infections by other bacterial species. ''
Aggregatibacter actinomycetemcomitans ''Aggregatibacter actinomycetemcomitans'' is a Gram-negative, facultative anaerobe, nonmotile bacterium that is often found in association with localized aggressive periodontitis, a severe infection of the periodontium. It is also suspected to b ...
'' has been identified as being of note in periodontal disease. The genus is typically the cause of oral-cervicofacial disease. It is characterized by a painless "lumpy jaw". Lymphadenopathy is uncommon in this form of the disease. Another form of actinomycosis is thoracic disease, which is often misdiagnosed as a neoplasm, as it forms a mass that extends to the chest wall. It arises from aspiration of organisms from the oropharynx. Symptoms include chest pain, fever, and weight loss. Abdominal disease is another manifestation of actinomycosis. This can lead to a sinus tract that drains to the abdominal wall or the perianal area. Symptoms include fever, abdominal pain, and weight loss.El Sahli, MD, MS. "Anaerobic Pathogens." ''Infectious Disease Module 2007.'' Baylor College of Medicine, 2007. ''Actinomyces'' species have also been shown to infect the central nervous system in a dog "without history or evidence of previous trauma or other organ involvement." Pelvic actinomycosis is a rare but proven complication of use of
intrauterine device An intrauterine device (IUD), also known as intrauterine contraceptive device (IUCD or ICD) or coil, is a small, often T-shaped birth control device that is inserted into the uterus to prevent pregnancy. IUDs are one form of long-acting rever ...
s. In extreme cases, pelvic abscesses might develop. Treatment of pelvic actinomycosis associated with intrauterine devices involves removal of the device and antibiotic treatment.


Diagnosis

Actinomycosis may be considered when a patient has chronic progression of disease across tissue planes that is mass-like at times, sinus tract development that may heal and recur, and refractory infection after a typical course of antibiotics.


Treatment

Treatment for actinomycosis consists of antibiotics such as
penicillin Penicillins (P, PCN or PEN) are a group of β-lactam antibiotics originally obtained from ''Penicillium'' moulds, principally '' P. chrysogenum'' and '' P. rubens''. Most penicillins in clinical use are synthesised by P. chrysogenum using ...
or amoxicillin for 5 to 12 months, as well as surgery if the disease is extensive.


Species

The genus ''Actinomyces'' comprises the following species: * "'' A. actinomycetemcomitans''" Iinuma et al. 1994 * "'' A. bouchesdurhonensis''" Fonkou et al. 2018 * '' A. bovis'' Harz 1877 (Approved Lists 1980) * '' A. bowdenii'' Pascual et al. 1999 * "'' A. capricornis''" Saito et al. 2021 * '' A. catuli'' Hoyles et al. 2001 * "'' A. culturomici''" Fonkou et al. 2018 * '' A. dentalis'' Hall et al. 2005 * '' A. denticolens'' Dent and Williams 1984 * '' A. faecalis'' Zhou et al. 2021 * '' A. gaoshouyii'' Meng et al. 2017 * '' A. gerencseriae'' Johnson et al. 1990 * "'' A. glycerinitolerans''" Palakawong Na Ayudthaya et al. 2016 * '' A. graevenitzii'' Pascual Ramos et al. 1997 * '' A. haliotis'' Hyun et al. 2014 * "'' A. houstonensis''" Clarridge and Zhang 2002 * '' A. howellii'' Dent and Williams 1984 * "'' A. ihuae''" Fonkou et al. 2018 * "'' A. ihumii''" Ndongo et al. 2016 * '' A. israelii'' (Kruse 1896) Lachner-Sandoval 1898 (Approved Lists 1980) * '' A. johnsonii'' Henssge et al. 2009 * '' A. lilanjuaniae'' Li et al. 2019 * "'' A. lingnae''" Clarridge and Zhang 2002 * '' A. marmotae'' Yang et al. 2021 * "'' A. marseillensis''" Fonkou et al. 2018 * '' A. massiliensis'' Renvoise et al. 2009 * "'' A. mediterranea''" Fonkou et al. 2018 * "'' A. minihominis''" Bilen et al. 2018 * '' A. naeslundii'' corrig. Thompson and Lovestedt 1951 (Approved Lists 1980) * "'' A. oralis''" Fonkou et al. 2018 * '' A. oricola'' Hall et al. 2003 * '' A. oris'' Henssge et al. 2009 * "'' A. pacaensis''" Fonkou et al. 2018 * "'' A. polynesiensis''" Cimmino et al. 2016 * '' A. procaprae'' Yang et al. 2021 * "'' A. provencensis''" Ndongo et al. 2017 * '' A. qiguomingii'' Zhu et al. 2020 * '' A. radicidentis'' Collins et al. 2001 * '' A. respiraculi'' Zhou et al. 2021 * '' A. ruminicola'' An et al. 2006 * '' A. slackii'' Dent and Williams 1986 * "'' A. succiniciruminis''" Palakawong Na Ayudthaya et al. 2016 * '' A. timonensis'' Renvoise et al. 2010 * '' A. trachealis'' Zhou et al. 2021 * "'' A. urinae''" Morand et al. 2016 * '' A. urogenitalis'' Nikolaitchouk et al. 2000 * '' A. viscosus'' (Howell et al. 1965) Georg et al. 1969 (Approved Lists 1980) * '' A. vulturis'' Meng et al. 2017 * '' A. weissii'' Hijazin et al. 2012 * '' A. wuliandei'' Zhu et al. 2020


Gallery

Image:Actinomyces - high mag.jpg, Micrograph of actinomycosis, H&E stain Image:Actinomycosis GROCOTT'S.JPG, Micrograph of actinomycosis,
GMS stain In pathology, the Grocott-Gomori's (or Gömöri) methenamine silver stain, abbreviated GMS, is a popular staining method in histology. The stain was originally named after György Gömöri, the Hungarian physician who developed the stain. It is ...
Image:Actinomycosis GRAM'S.JPG, Micrograph of actinomycosis, Gram stain


References


External links


''Actinomyces'' naeslundii MG1 Genome Page''Actinomyces'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q312213 Actinomycetales Gram-positive bacteria Bacteria genera es:Actinomycetes nl:Actinomycetes