Jute Genome
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Jute Genome
A consortium of researchers in Bangladesh successfully completed draft genome sequencing for the jute plant. The consortium consisted of Dhaka University, Bangladesh Jute Research Institute, and software company DataSoft Systems Bangladesh Ltd. It worked in collaboration with Centre for Chemical Biology, University of Science Malaysia, and University of Hawaii at Manoa. On June 16, 2010, Bangladeshi Prime Minister Sheikh Hasina disclosed in the parliament that Bangladeshi researchers had successfully completed the draft genome sequencing, which was anticipated to contribute to improvements in jute fiber production. History It all began in February 2008, when Maqsudul Alam approached Professor Ahmad Shamsul Islam, Coordinator of GNOBB (Global Network of Bangladeshi Biotechnologists) regarding the possibility of sequencing the jute genome. The Bangladeshi science community, which was already looking into the possibility of getting the jute genome sequenced, responded to ...
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Bangladesh
Bangladesh (}, ), officially the People's Republic of Bangladesh, is a country in South Asia. It is the eighth-most populous country in the world, with a population exceeding 165 million people in an area of . Bangladesh is among the most densely populated countries in the world, and shares land borders with India to the west, north, and east, and Myanmar to the southeast; to the south it has a coastline along the Bay of Bengal. It is narrowly separated from Bhutan and Nepal by the Siliguri Corridor; and from China by the Indian state of Sikkim in the north. Dhaka, the capital and largest city, is the nation's political, financial and cultural centre. Chittagong, the second-largest city, is the busiest port on the Bay of Bengal. The official language is Bengali, one of the easternmost branches of the Indo-European language family. Bangladesh forms the sovereign part of the historic and ethnolinguistic region of Bengal, which was divided during the Partition of India in ...
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Structural Genomics
Structural genomics seeks to describe the 3-dimensional structure of every protein encoded by a given genome. This genome-based approach allows for a high-throughput method of structure determination by a combination of experimental and modeling approaches. The principal difference between structural genomics and traditional structural prediction is that structural genomics attempts to determine the structure of every protein encoded by the genome, rather than focusing on one particular protein. With full-genome sequences available, structure prediction can be done more quickly through a combination of experimental and modeling approaches, especially because the availability of large number of sequenced genomes and previously solved protein structures allows scientists to model protein structure on the structures of previously solved homologs. Because protein structure is closely linked with protein function, the structural genomics has the potential to inform knowledge of prote ...
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Genome Project
Genome projects are scientific endeavours that ultimately aim to determine the complete genome sequence of an organism (be it an animal, a plant, a fungus, a bacterium, an archaean, a protist or a virus) and to annotate protein-coding genes and other important genome-encoded features. The genome sequence of an organism includes the collective DNA sequences of each chromosome in the organism. For a bacterium containing a single chromosome, a genome project will aim to map the sequence of that chromosome. For the human species, whose genome includes 22 pairs of autosomes and 2 sex chromosomes, a complete genome sequence will involve 46 separate chromosome sequences. The Human Genome Project is a well known example of a genome project. Genome assembly Genome assembly refers to the process of taking a large number of short DNA sequences and reassembling them to create a representation of the original chromosomes from which the DNA originated. In a shotgun sequencing project, all th ...
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Silicon Graphics
Silicon Graphics, Inc. (stylized as SiliconGraphics before 1999, later rebranded SGI, historically known as Silicon Graphics Computer Systems or SGCS) was an American high-performance computing manufacturer, producing computer hardware and software. Founded in Mountain View, California in November 1981 by Jim Clark, its initial market was 3D graphics computer workstations, but its products, strategies and market positions developed significantly over time. Early systems were based on the Geometry Engine that Clark and Marc Hannah had developed at Stanford University, and were derived from Clark's broader background in computer graphics. The Geometry Engine was the first very-large-scale integration (VLSI) implementation of a geometry pipeline, specialized hardware that accelerated the "inner-loop" geometric computations needed to display three-dimensional images. For much of its history, the company focused on 3D imaging and was a major supplier of both hardware and software ...
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Transcriptome
The transcriptome is the set of all RNA transcripts, including coding and non-coding, in an individual or a population of cells. The term can also sometimes be used to refer to all RNAs, or just mRNA, depending on the particular experiment. The term ''transcriptome'' is a portmanteau of the words ''transcript'' and ''genome''; it is associated with the process of transcript production during the biological process of transcription. The early stages of transcriptome annotations began with cDNA libraries published in the 1980s. Subsequently, the advent of high-throughput technology led to faster and more efficient ways of obtaining data about the transcriptome. Two biological techniques are used to study the transcriptome, namely DNA microarray, a hybridization-based technique and RNA-seq, a sequence-based approach. RNA-seq is the preferred method and has been the dominant transcriptomics technique since the 2010s. Single-cell transcriptomics allows tracking of transcript changes ...
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University Of Dhaka
The University of Dhaka (also known as Dhaka University, or DU) is a public research university located in Dhaka, Bangladesh. It is the oldest university in Bangladesh. The university opened its doors to students on July 1st 1921. Currently it is the largest public research university in Bangladesh, with a student body of 46,150 and a faculty of 1,992. Nawab Bahadur Sir Khwaja Salimullah, who played a pioneering role in establishing the university in Dhaka, donated 600 acres of land from his estate for this purpose. It has made significant contributions to the modern history of Bangladesh. After the Partition of India, it became the focal point of progressive and democratic movements in Pakistan. Its students and teachers played a central role in the rise of Bengali nationalism and the independence of Bangladesh in 1971. Notable alumni include Muhammad Yunus (winner 2006 Nobel Peace Prize, pioneer of microcredit), Natyaguru Nurul Momen (pioneer literature, theatre & cu ...
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Zeba Islam Seraj
Zeba Islam Seraj is a Bangladeshi scientist known for her research in developing salt-tolerant rice varieties suitable for growth in the coastal areas of Bangladesh. She is currently a professor at the Department of Biochemistry and Molecular Biology, University of Dhaka. Academic career Seraj studied at the University of Dhaka, Bangladesh obtaining a B.Sc. in 1980. She completed her M.Sc. from the same university in 1982. She obtained her PhD in biochemistry from University of Glasgow in 1986 and went to University of Liverpool for post-doctoral work in the following year. After completing her post-doc., she joined the Department of Biochemistry and Molecular Biology, University of Dhaka in 1988. She became an associate professor in 1991 and later a professor in 1997 at the same university. She has been supervising plant biotechnology projects funded by foreign and local grants as a principal investigator since 1991. She is a visiting researcher with UT Austin since 2013 Researc ...
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Haseena Khan
Haseena Khan is a Bangladeshi scientist, professor and fellow of Bangladesh Academy of Sciences. She is known for her lead on decoding Genome of ''Tenualosa ilisha'' from the river Padma. She was awarded Independence Day Award, the highest state award given by the government of Bangladesh for her contribution on research and training. Haseena Khan is also known for her contribution to jute genome decoding under Maqsudul Alam's lead. Biography Begum Haseena was born in Gendaria, Old Dhaka to a Bengali Muslim family of Dhakaiya heritage. Her father, Muhammad Abdul Khaleq, was a government employee whilst her mother, Begum Khodeza Khatun, was a housewife. Haseena was eighth among nine siblings. Two years after birth, the family moved to transferred to Kolkata, West Bengal as her father was serving as an Ambassador there. As a result, she spent her childhood in Kolkata. Haseena Khan is married and mother of one daughter. Education Khan started her schooling at a Missionary School ...
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Molecular Biologist
Molecular biology is the branch of biology that seeks to understand the molecular basis of biological activity in and between cells, including biomolecular synthesis, modification, mechanisms, and interactions. The study of chemical and physical structure of biological macromolecules is known as molecular biology. Molecular biology was first described as an approach focused on the underpinnings of biological phenomena - uncovering the structures of biological molecules as well as their interactions, and how these interactions explain observations of classical biology. In 1945 the term molecular biology was used by physicist William Astbury. In 1953 Francis Crick, James Watson, Rosalind Franklin, and colleagues, working at Medical Research Council unit, Cavendish laboratory, Cambridge (now the MRC Laboratory of Molecular Biology), made a double helix model of DNA which changed the entire research scenario. They proposed the DNA structure based on previous research done by Ro ...
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Conference Call
A conference call is a telephone call in which someone talks to several people at the same time. The conference call may be designed to allow the called party to participate during the call or set up so that the called party merely listens into the call and cannot speak. It is sometimes called ATC (audio teleconference). Conference calls can be designed so that the calling party calls the other participants and adds them to the call; however, participants are usually able to call into the conference call themselves by dialing a telephone number that connects to a "conference bridge," which is a specialized type of equipment that links telephone lines. Companies commonly use a specialized service provider who maintains the conference bridge, or who provides the phone numbers and PIN codes that participants dial to access the meeting or conference call. These service providers can often dial-out to participants, connecting them to call and introducing them to the parties who are o ...
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