Isorenieratene
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Isorenieratene
Isorenieratene is a carotenoid light harvesting pigment with the chemical formula C40H48. Isorenieratene and its derivatives are useful to marine chemists studying the carbon cycle as biomarkers that indicate photic zone anoxia. Isorenieratene is produced by green sulfur bacteria (''Chlorobium'') which perform photosynthesis using hydrogen sulfide rather than water: :H2S + CO2 → SO42− + organic compounds Such anoxygenic photosynthesis requires reduced sulfur (and therefore strictly anaerobic conditions) and light (''hν''). This combination of conditions is very unusual nowadays, since it requires very stratified water columns to achieve a sharp density gradient, i.e. a constrained basin with fresh water flowing, or warm water on top of cooler water. Green sulfur bacteria are commonly found in meromictic lakes and ponds, sediments, and some sinkholes. Some marine environments, such as certain fjords and the Black Sea also fulfill these criteria. In the early history o ...
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Green Sulfur Bacteria
The green sulfur bacteria are a phylum of obligately anaerobic photoautotrophic bacteria that metabolize sulfur. Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxygenic photosynthesis. They live in anaerobic aquatic environments. In contrast to plants, green sulfur bacteria mainly use sulfide ions as electron donors. They are autotrophs that utilize the reverse tricarboxylic acid cycle to perform carbon fixation. They are also mixotrophs and reduce nitrogen. Characteristics Green sulfur bacteria are gram-negative rod or spherical shaped bacteria. Some types of green sulfur bacteria have gas vacuoles that allow for movement. They are photolithoautotrophs, and use light energy and reduced sulfur compounds as the electron source. Electron donors include H2, H2S, S. The major photosynthetic pigment in these bacteria is Bacteriochlorophylls ''c'' or ''d'' in green species and ''e'' in brown species, and is located in t ...
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Bulletin Of The Chemical Society Of Japan
is a scientific journal, which was founded in 1926 by the Chemical Society of Japan. It publishes accounts, articles, and short articles in the fields of theoretical and physical chemistry, analytical and inorganic chemistry, organic and biological chemistry, and applied and materials chemistry. Due to World War II World War II or the Second World War, often abbreviated as WWII or WW2, was a world war that lasted from 1939 to 1945. It involved the vast majority of the world's countries—including all of the great powers—forming two opposin ... publication was suspended between 1945 and 1946. It is published in both a print edition and an online edition. External links Homepage of the Chemical Society of Japan References Chemistry journals Publications established in 1926 Academic journals published by learned and professional societies Chemical Society of Japan {{chem-journal-stub ...
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Hydrogen Sulfide
Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is poisonous, corrosive, and flammable, with trace amounts in ambient atmosphere having a characteristic foul odor of rotten eggs. The underground mine gas term for foul-smelling hydrogen sulfide-rich gas mixtures is ''stinkdamp''. Swedish chemist Carl Wilhelm Scheele is credited with having discovered the chemical composition of purified hydrogen sulfide in 1777. The British English spelling of this compound is hydrogen sulphide, a spelling no longer recommended by the Royal Society of Chemistry or the International Union of Pure and Applied Chemistry. Hydrogen sulfide is toxic to humans and most other animals by inhibiting cellular respiration in a manner similar to hydrogen cyanide. When it is inhaled or it or its salts are ingested in high amounts, damage to organs occurs rapidly with symptoms ranging from breathing difficulties to convulsions and death. Despite this, the ...
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Chlorophyll
Chlorophyll (also chlorophyl) is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words , ("pale green") and , ("leaf"). Chlorophyll allow plants to absorb energy from light. Chlorophylls absorb light most strongly in the blue portion of the electromagnetic spectrum as well as the red portion. Conversely, it is a poor absorber of green and near-green portions of the spectrum. Hence chlorophyll-containing tissues appear green because green light, diffusively reflected by structures like cell walls, is less absorbed. Two types of chlorophyll exist in the photosystems of green plants: chlorophyll ''a'' and ''b''. History Chlorophyll was first isolated and named by Joseph Bienaimé Caventou and Pierre Joseph Pelletier in 1817. The presence of magnesium in chlorophyll was discovered in 1906, and was that element's first detection in living tissue. After initial work done by German chemi ...
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Black Sea
The Black Sea is a marginal mediterranean sea of the Atlantic Ocean lying between Europe and Asia, east of the Balkans, south of the East European Plain, west of the Caucasus, and north of Anatolia. It is bounded by Bulgaria, Georgia, Romania, Russia, Turkey, and Ukraine. The Black Sea is supplied by major rivers, principally the Danube, Dnieper, and Don. Consequently, while six countries have a coastline on the sea, its drainage basin includes parts of 24 countries in Europe. The Black Sea covers (not including the Sea of Azov), has a maximum depth of , and a volume of . Most of its coasts ascend rapidly. These rises are the Pontic Mountains to the south, bar the southwest-facing peninsulas, the Caucasus Mountains to the east, and the Crimean Mountains to the mid-north. In the west, the coast is generally small floodplains below foothills such as the Strandzha; Cape Emine, a dwindling of the east end of the Balkan Mountains; and the Dobruja Plateau considerably farth ...
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Fjord
In physical geography, a fjord or fiord () is a long, narrow inlet with steep sides or cliffs, created by a glacier. Fjords exist on the coasts of Alaska, Antarctica, British Columbia, Chile, Denmark, Germany, Greenland, the Faroe Islands, Iceland, Ireland, Kamchatka, the Kerguelen Islands, Labrador, Newfoundland, New Zealand, Norway, Novaya Zemlya, Nunavut, Quebec, the Patagonia region of Argentina and Chile, Russia, South Georgia Island, Tasmania, United Kingdom, and Washington state. Norway's coastline is estimated to be long with its nearly 1,200 fjords, but only long excluding the fjords. Formation A true fjord is formed when a glacier cuts a U-shaped valley by ice segregation and abrasion of the surrounding bedrock. According to the standard model, glaciers formed in pre-glacial valleys with a gently sloping valley floor. The work of the glacier then left an overdeepened U-shaped valley that ends abruptly at a valley or trough end. Such valleys are fjords wh ...
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Meromictic
A meromictic lake is a lake which has layers of water that do not intermix. In ordinary, holomictic lakes, at least once each year, there is a physical mixing of the surface and the deep waters. The term ''meromictic'' was coined by the Austrian Ingo Findenegg in 1935, apparently based on the older word ''holomictic''. The concepts and terminology used in describing meromictic lakes were essentially complete following some additions by G. Evelyn Hutchinson in 1937. Characteristics Most lakes are ''holomictic''; that is, at least once per year, physical mixing occurs between the surface and the deep waters. In so-called monomictic lakes, the mixing occurs once per year; in dimictic lakes, the mixing occurs twice a year (typically spring and autumn), and in polymictic lakes, the mixing occurs several times a year. In meromictic lakes, however, the layers of the lake water can remain unmixed for years, decades, or centuries. Meromictic lakes can usually be divided into th ...
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Anoxygenic Photosynthesis
Bacterial anoxygenic photosynthesis differs from the better known oxygenic photosynthesis in plants by the reductant used (e.g. hydrogen sulfide instead of water) and the byproduct generated (e.g. elemental sulfur instead of molecular oxygen). Bacteria and archaea Several groups of bacteria can conduct anoxygenic photosynthesis: green sulfur bacteria (GSB), red and green filamentous phototrophs (FAPs e.g. Chloroflexia), purple bacteria, acidobacteriota, and heliobacteria. Some archaea (e.g. '' Halobacterium'') capture light energy for metabolic function and are thus phototrophic but none are known to "fix" carbon (i.e. be photosynthetic). Instead of a chlorophyll-type receptor and electron transport chain, proteins such as halorhodopsin capture light energy with the aid of diterpenes to move ions against a gradient and produce ATP via chemiosmosis in the manner of mitochondria. Pigments The pigments used to carry out anaerobic photosynthesis are similar to chlorophyll but differ ...
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Organic Compound
In chemistry, organic compounds are generally any chemical compounds that contain carbon-hydrogen or carbon-carbon bonds. Due to carbon's ability to catenate (form chains with other carbon atoms), millions of organic compounds are known. The study of the properties, reactions, and syntheses of organic compounds comprise the discipline known as organic chemistry. For historical reasons, a few classes of carbon-containing compounds (e.g., carbonate salts and cyanide salts), along with a few other exceptions (e.g., carbon dioxide, hydrogen cyanide), are not classified as organic compounds and are considered inorganic. Other than those just named, little consensus exists among chemists on precisely which carbon-containing compounds are excluded, making any rigorous definition of an organic compound elusive. Although organic compounds make up only a small percentage of Earth's crust, they are of central importance because all known life is based on organic compounds. Living t ...
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Chlorobium
''Chlorobium'' is a genus of green sulfur bacteria. They are photolithotrophic oxidizers of sulfur and most notably utilise a noncyclic electron transport chain to reduce NAD+. Photosynthesis is achieved using a Type 1 Reaction Centre using bacteriochlorophyll (BChl) ''a''. Two photosynthetic antenna complexes aid in light absorption: the Fenna-Matthews-Olson complex ("FMO", also containing BChl ''a''), and the chlorosomes which employ mostly BChl ''c'', ''d'', or ''e''. Hydrogen sulfide is used as an electron source and carbon dioxide its carbon source.Prescott, Harley, Klein. (2005). ''Microbiology'' pp. 195, 493, 597, 618-619, 339. ''Chlorobium'' species exhibit a dark green color; in a Winogradsky column, the green layer often observed is composed of ''Chlorobium''. This genus lives in strictly anaerobic conditions below the surface of a body of water, commonly the anaerobic zone of a eutrophic lake. '' Chlorobium aggregatum'' is a species which exists in a symbiotic rela ...
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Photosynthesis
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored in carbohydrate molecules, such as sugars and starches, which are synthesized from carbon dioxide and water – hence the name ''photosynthesis'', from the Greek ''phōs'' (), "light", and ''synthesis'' (), "putting together". Most plants, algae, and cyanobacteria perform photosynthesis; such organisms are called photoautotrophs. Photosynthesis is largely responsible for producing and maintaining the oxygen content of the Earth's atmosphere, and supplies most of the energy necessary for life on Earth. Although photosynthesis is performed differently by different species, the process always begins when energy from light is absorbed by proteins called reaction centers that contain green chlorophyll (and other colored) pigments/chromoph ...
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Carotenoid
Carotenoids (), also called tetraterpenoids, are yellow, orange, and red organic compound, organic pigments that are produced by plants and algae, as well as several bacteria, and Fungus, fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, maize, corn, tomatoes, Domestic Canary, canaries, flamingos, salmon, lobster, shrimp, and daffodils. Carotenoids can be produced from Lipid, fats and other basic organic metabolic building blocks by all these organisms. It is also produced by Endosymbiont, endosymbiotic bacteria in Whitefly, whiteflies. Carotenoids from the diet are stored in the fatty tissues of animals, and exclusively Carnivore, carnivorous animals obtain the compounds from animal fat. In the human diet, Small intestine#Absorption, absorption of carotenoids is improved when consumed with fat in a meal. Cooking carotenoid-containing vegetables in oil and shredding the vegetable both increase carotenoid bioavailability. There are over 1,100 known c ...
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