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Hypogeous
Hypogeal, hypogean, hypogeic and hypogeous (; ) are biological terms describing an organism's activity below the soil surface. In botany, a seed is described as showing hypogeal germination when the cotyledons of the germinating seed remain non-photosynthetic, inside the seed shell, and below ground.{{cite book, author1=Adrian D. Bell, author2=Alan Bryan, title=Plant Form: An Illustrated Guide to Flowering Plant Morphology, url=https://books.google.com/books?id=SM3khPHXhKEC&pg=PA200, year=2008, publisher=Timber Press, isbn=978-0-88192-850-1, page=200 The converse, where the cotyledons expand, throw off the seed shell and become photosynthetic above the ground, is epigeal germination. In water purification works, the hypogeal (or Schmutzdecke) layer is a biological film just below the surface of slow sand filters. It contains microorganisms that remove bacteria and trap contaminant particles. The terms hypogean and hypogeic are used for fossorial (burrowing) and troglobitic (or ...
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Germinate
Germination is the process by which an organism grows from a seed or spore. The term is applied to the sprouting of a seedling from a seed of an angiosperm or gymnosperm, the growth of a sporeling from a spore, such as the spores of fungi, ferns, bacteria, and the growth of the pollen tube from the pollen grain of a seed plant. Seed plants Germination is usually the growth of a plant contained within a seed; it results in the formation of the seedling. It is also the process of reactivation of metabolic machinery of the seed resulting in the emergence of radicle and plumule. The seed of a vascular plant is a small package produced in a fruit or cone after the union of male and female reproductive cells. All fully developed seeds contain an embryo and, in most plant species some store of food reserves, wrapped in a seed coat. Some plants produce varying numbers of seeds that lack embryos; these are empty seeds which never germinate. Dormant seeds are viable seeds that do ...
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Epigeous
Epigeal, epigean, epigeic and epigeous are biological terms describing an organism's activity above the soil surface. In botany, a seed is described as showing epigeal germination when the cotyledons of the germinating seed expand, throw off the seed shell and become photosynthetic above the ground. The opposite kind, where the cotyledons remain non-photosynthetic, inside the seed shell, and below ground, is hypogeal germination. The terms epigean, epigeic or epigeous are used for organisms that crawl (epigean), creep like a vine (epigeal), or grow (epigeous) on the soil surface: they are also used more generally for animals that neither burrow nor swim nor fly. The opposite terms are hypogean, hypogeic and hypogeous. An epigeal nest is a term used for a termite mound, the above ground nest of a colony of termites. See also * List of plant morphology terms A ''list'' is any set of items in a row. List or lists may also refer to: People * List (surname) Organizations ...
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Epigeic
Epigeal, epigean, epigeic and epigeous are biological terms describing an organism's activity above the soil surface. In botany, a seed is described as showing epigeal germination when the cotyledons of the germinating seed expand, throw off the seed shell and become photosynthetic above the ground. The opposite kind, where the cotyledons remain non-photosynthetic, inside the seed shell, and below ground, is hypogeal germination. The terms epigean, epigeic or epigeous are used for organisms that crawl (epigean), creep like a vine (epigeal), or grow (epigeous) on the soil surface: they are also used more generally for animals that neither burrow nor swim nor fly. The opposite terms are hypogean, hypogeic and hypogeous. An epigeal nest is a term used for a termite mound, the above ground nest of a colony of termite Termites are small insects that live in colonies and have distinct castes (eusocial) and feed on wood or other dead plant matter. Termites comprise the infraord ...
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Epigean
Epigeal, epigean, epigeic and epigeous are biological terms describing an organism's activity above the soil surface. In botany, a seed is described as showing epigeal germination when the cotyledons of the germinating seed expand, throw off the seed shell and become photosynthetic above the ground. The opposite kind, where the cotyledons remain non-photosynthetic, inside the seed shell, and below ground, is hypogeal germination. The terms epigean, epigeic or epigeous are used for organisms that crawl (epigean), creep like a vine (epigeal), or grow (epigeous) on the soil surface: they are also used more generally for animals that neither burrow nor swim nor fly. The opposite terms are hypogean, hypogeic and hypogeous. An epigeal nest is a term used for a termite mound, the above ground nest of a colony of termites. See also * List of plant morphology terms A ''list'' is any set of items in a row. List or lists may also refer to: People * List (surname) Organizations * ...
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Microorganism
A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in older texts. The informal synonym ''microbe'' () comes from μικρός, mikrós, "small" and βίος, bíos, "life". is an organism of microscopic size, which may exist in its single-celled form or as a colony of cells. The possible existence of unseen microbial life was suspected from ancient times, such as in Jain scriptures from sixth century BC India. The scientific study of microorganisms began with their observation under the microscope in the 1670s by Anton van Leeuwenhoek. In the 1850s, Louis Pasteur found that microorganisms caused food spoilage, debunking the theory of spontaneous generation. In the 1880s, Robert Koch discovered that microorganisms caused the diseases tuberculosis, cholera, diphtheria, and anthrax. Because mi ...
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Truffle
A truffle is the fruiting body of a subterranean ascomycete fungus, predominantly one of the many species of the genus ''Tuber''. In addition to ''Tuber'', many other genera of fungi are classified as truffles including ''Geopora'', ''Peziza'', ''Choiromyces'', ''Leucangium'', and over a hundred others. These genera belong to the class Pezizomycetes and the Pezizales order. Several truffle-like basidiomycetes are excluded from Pezizales, including ''Rhizopogon'' and ''Glomus''. Truffles are ectomycorrhizal fungi, so they are usually found in close association with tree roots. Spore dispersal is accomplished through fungivores, animals that eat fungi. These fungi have significant ecological roles in nutrient cycling and drought tolerance. Some truffle species are highly prized as food. French gastronome Jean Anthelme Brillat-Savarin called truffles "the diamond of the kitchen". Edible truffles are used in Italian, French and numerous other national . Truffles are cultivat ...
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Cave
A cave or cavern is a natural void in the ground, specifically a space large enough for a human to enter. Caves often form by the weathering of rock and often extend deep underground. The word ''cave'' can refer to smaller openings such as sea caves, rock shelters, and grottos, that extend a relatively short distance into the rock and they are called ''exogene'' caves. Caves which extend further underground than the opening is wide are called ''endogene'' caves. Speleology is the science of exploration and study of all aspects of caves and the cave environment. Visiting or exploring caves for recreation may be called ''caving'', ''potholing'', or ''spelunking''. Formation types The formation and development of caves is known as ''speleogenesis''; it can occur over the course of millions of years. Caves can range widely in size, and are formed by various geological processes. These may involve a combination of chemical processes, erosion by water, tectonic forces, microorgani ...
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Stygofauna
Stygofauna are any fauna that live in groundwater systems or aquifers, such as caves, fissures and vugs. Stygofauna and troglofauna are the two types of subterranean fauna (based on life-history). Both are associated with subterranean environments – stygofauna are associated with water, and troglofauna with caves and spaces above the water table. Stygofauna can live within freshwater aquifers and within the pore spaces of limestone, calcrete or laterite, whilst larger animals can be found in cave waters and wells. Stygofaunal animals, like troglofauna, are divided into three groups based on their life history - stygophiles, stygoxenes, and stygobites. # Stygophiles inhabit both surface and subterranean aquatic environments, but are not necessarily restricted to either. # Stygoxenes are like stygophiles, except they are defined as accidental or occasional presence in subterranean waters. Stygophiles and stygoxenes may live for part of their lives in caves, but don't complete th ...
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Troglobite
A troglobite (or, formally, troglobiont) is an animal species, or population of a species, strictly bound to underground habitats, such as caves. These are separate from species that mainly live in above-ground habitats but are also able to live underground (eutroglophiles), and species that are only cave visitors ( subtroglophiles and trogloxenes). Land-dwelling troglobites may be referred to as troglofauna, while aquatic species may be called stygofauna, although for these animals the term ''stygobite'' is preferable. Troglobites typically have evolutionary adaptations to cave life. Examples of such adaptations include slow metabolism, reduced energy consumption, better food usage efficiency, decrease or loss of eyesight (anophthalmia), and depigmentation (absence of pigment in the integument). Conversely, as opposed to lost or reduced functions, many species have evolved elongated antenna and locomotory appendages, in order to better move around and respond to environmental s ...
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Burrow
An Eastern chipmunk at the entrance of its burrow A burrow is a hole or tunnel excavated into the ground by an animal to construct a space suitable for habitation or temporary refuge, or as a byproduct of locomotion. Burrows provide a form of shelter against predation and exposure to the elements, and can be found in nearly every biome and among various biological interactions. Many animal species are known to form burrows. These species range from small invertebrates, such as the ''Corophium arenarium'', to very large vertebrate species such as the polar bear. Burrows can be constructed into a wide variety of substrates and can range in complexity from a simple tube a few centimeters long to a complex network of interconnecting tunnels and chambers hundreds or thousands of meters in total length; an example of the latter level of complexity, a well-developed burrow, would be a rabbit warren. Vertebrate burrows A large variety of vertebrates construct or use burrows in many t ...
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Fossorial
A fossorial () animal is one adapted to digging which lives primarily, but not solely, underground. Some examples are badgers, naked mole-rats, clams, meerkats, and mole salamanders, as well as many beetles, wasps, and bees. Prehistoric evidence The physical adaptation of fossoriality is widely accepted as being widespread among many prehistoric phyla and taxa, such as bacteria and early eukaryotes. Furthermore, fossoriality has evolved independently multiple times, even within a single family. Fossorial animals appeared simultaneously with the colonization of land by arthropods in the late Ordovician period (over 440 million years ago). Other notable early burrowers include ''Eocaecilia'' and possibly ''Dinilysia''. The oldest example of burrowing in synapsids, the lineage which includes modern mammals and their ancestors, is a cynodont, ''Thrinaxodon liorhinus'', found in the Karoo of South Africa, estimated to be 251 million years old. Evidence shows that this ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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