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Graph Partition
In mathematics, a graph partition is the reduction of a graph to a smaller graph by partitioning its set of nodes into mutually exclusive groups. Edges of the original graph that cross between the groups will produce edges in the partitioned graph. If the number of resulting edges is small compared to the original graph, then the partitioned graph may be better suited for analysis and problem-solving than the original. Finding a partition that simplifies graph analysis is a hard problem, but one that has applications to scientific computing, VLSI circuit design, and task scheduling in multiprocessor computers, among others. Recently, the graph partition problem has gained importance due to its application for clustering and detection of cliques in social, pathological and biological networks. For a survey on recent trends in computational methods and applications see . Two common examples of graph partitioning are minimum cut and maximum cut problems. Problem complexity Typicall ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Graph (discrete Mathematics)
In discrete mathematics, and more specifically in graph theory, a graph is a structure amounting to a Set (mathematics), set of objects in which some pairs of the objects are in some sense "related". The objects correspond to mathematical abstractions called ''Vertex (graph theory), vertices'' (also called ''nodes'' or ''points'') and each of the related pairs of vertices is called an ''edge'' (also called ''link'' or ''line''). Typically, a graph is depicted in diagrammatic form as a set of dots or circles for the vertices, joined by lines or curves for the edges. Graphs are one of the objects of study in discrete mathematics. The edges may be directed or undirected. For example, if the vertices represent people at a party, and there is an edge between two people if they shake hands, then this graph is undirected because any person ''A'' can shake hands with a person ''B'' only if ''B'' also shakes hands with ''A''. In contrast, if an edge from a person ''A'' to a person ''B'' m ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Graph Laplacian
In the mathematical field of graph theory, the Laplacian matrix, also called the graph Laplacian, admittance matrix, Kirchhoff matrix or discrete Laplacian, is a matrix representation of a graph. Named after Pierre-Simon Laplace, the graph Laplacian matrix can be viewed as a matrix form of the negative discrete Laplace operator on a graph approximating the negative continuous Laplacian obtained by the finite difference method. The Laplacian matrix relates to many useful properties of a graph. Together with Kirchhoff's theorem, it can be used to calculate the number of spanning trees for a given graph. The sparsest cut of a graph can be approximated through the Fiedler vector — the eigenvector corresponding to the second smallest eigenvalue of the graph Laplacian — as established by Cheeger's inequality. The spectral decomposition of the Laplacian matrix allows constructing low dimensional embeddings that appear in many machine learning applications and determines a spec ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Modularity (networks)
Modularity is a measure of the structure of networks or graphs which measures the strength of division of a network into modules (also called groups, clusters or communities). Networks with high modularity have dense connections between the nodes within modules but sparse connections between nodes in different modules. Modularity is often used in optimization methods for detecting community structure in networks. However, it has been shown that modularity suffers a resolution limit and, therefore, it is unable to detect small communities. Biological networks, including animal brains, exhibit a high degree of modularity. Motivation Many scientifically important problems can be represented and empirically studied using networks. For example, biological and social patterns, the World Wide Web, metabolic networks, food webs, neural networks and pathological networks are real world problems that can be mathematically represented and topologically studied to reveal some unexpected str ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Connected Graph
In mathematics and computer science, connectivity is one of the basic concepts of graph theory: it asks for the minimum number of elements (nodes or edges) that need to be removed to separate the remaining nodes into two or more isolated subgraphs. It is closely related to the theory of network flow problems. The connectivity of a graph is an important measure of its resilience as a network. Connected vertices and graphs In an undirected graph , two '' vertices'' and are called connected if contains a path from to . Otherwise, they are called disconnected. If the two vertices are additionally connected by a path of length , i.e. by a single edge, the vertices are called adjacent. A graph is said to be connected if every pair of vertices in the graph is connected. This means that there is a path between every pair of vertices. An undirected graph that is not connected is called disconnected. An undirected graph ''G'' is therefore disconnected if there exist two vertices i ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Algebraic Connectivity
The algebraic connectivity (also known as Fiedler value or Fiedler eigenvalue after Miroslav Fiedler) of a graph ''G'' is the second-smallest eigenvalue (counting multiple eigenvalues separately) of the Laplacian matrix of ''G''. This eigenvalue is greater than 0 if and only if ''G'' is a connected graph. This is a corollary to the fact that the number of times 0 appears as an eigenvalue in the Laplacian is the number of connected components in the graph. The magnitude of this value reflects how well connected the overall graph is. It has been used in analyzing the robustness and synchronizability of networks. Properties The truncated icosahedron or Buckminsterfullerene graph has a traditional connectivity (graph theory)">connectivity of 3, and an algebraic connectivity of 0.243. The algebraic connectivity of undirected graphs with nonnegative weights, a(G)\geq0 with the inequality being strict if and only if G is connected. However, the algebraic connectivity can be negativ ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Laplacian Matrix
In the mathematical field of graph theory, the Laplacian matrix, also called the graph Laplacian, admittance matrix, Kirchhoff matrix or discrete Laplacian, is a matrix representation of a graph. Named after Pierre-Simon Laplace, the graph Laplacian matrix can be viewed as a matrix form of the negative discrete Laplace operator on a graph approximating the negative continuous Laplacian obtained by the finite difference method. The Laplacian matrix relates to many useful properties of a graph. Together with Kirchhoff's theorem, it can be used to calculate the number of spanning trees for a given graph. The sparsest cut of a graph can be approximated through the Fiedler vector — the eigenvector corresponding to the second smallest eigenvalue of the graph Laplacian — as established by Cheeger's inequality. The spectral decomposition of the Laplacian matrix allows constructing low dimensional embeddings that appear in many machine learning applications and determines a spectr ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Degree Matrix
In the mathematical field of algebraic graph theory, the degree matrix of an undirected graph is a diagonal matrix which contains information about the degree of each vertex—that is, the number of edges attached to each vertex.. It is used together with the adjacency matrix to construct the Laplacian matrix of a graph: the Laplacian matrix is the difference of the degree matrix and the adjacency matrix.. Definition Given a graph G=(V,E) with , V, =n, the degree matrix D for G is a n \times n diagonal matrix defined as :D_:=\left\{ \begin{matrix} \deg(v_i) & \mbox{if}\ i = j \\ 0 & \mbox{otherwise} \end{matrix} \right. where the degree \deg(v_i) of a vertex counts the number of times an edge terminates at that vertex. In an undirected graph, this means that each loop increases the degree of a vertex by two. In a directed graph, the term ''degree'' may refer either to indegree (the number of incoming edges at each vertex) or outdegree (the number of outgoing edges at each vertex ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Adjacency Matrix
In graph theory and computer science, an adjacency matrix is a square matrix used to represent a finite graph. The elements of the matrix indicate whether pairs of vertices are adjacent or not in the graph. In the special case of a finite simple graph, the adjacency matrix is a (0,1)-matrix with zeros on its diagonal. If the graph is undirected (i.e. all of its edges are bidirectional), the adjacency matrix is symmetric. The relationship between a graph and the eigenvalues and eigenvectors of its adjacency matrix is studied in spectral graph theory. The adjacency matrix of a graph should be distinguished from its incidence matrix, a different matrix representation whose elements indicate whether vertex–edge pairs are incident or not, and its degree matrix, which contains information about the degree of each vertex. Definition For a simple graph with vertex set , the adjacency matrix is a square matrix such that its element is one when there is an edge from vertex to ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Preconditioning
In mathematics, preconditioning is the application of a transformation, called the preconditioner, that conditions a given problem into a form that is more suitable for numerical solving methods. Preconditioning is typically related to reducing a condition number of the problem. The preconditioned problem is then usually solved by an iterative method. Preconditioning for linear systems In linear algebra and numerical analysis, a preconditioner P of a matrix A is a matrix such that P^A has a smaller condition number than A. It is also common to call T=P^ the preconditioner, rather than P, since P itself is rarely explicitly available. In modern preconditioning, the application of T=P^, i.e., multiplication of a column vector, or a block of column vectors, by T=P^, is commonly performed in a matrix-free fashion, i.e., where neither P, nor T=P^ (and often not even A) are explicitly available in a matrix form. Preconditioners are useful in iterative methods to solve a linear ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Multigrid
In numerical analysis, a multigrid method (MG method) is an algorithm for solving differential equations using a hierarchy of discretizations. They are an example of a class of techniques called multiresolution methods, very useful in problems exhibiting multiple scales of behavior. For example, many basic relaxation methods exhibit different rates of convergence for short- and long-wavelength components, suggesting these different scales be treated differently, as in a Fourier analysis approach to multigrid. MG methods can be used as solvers as well as preconditioners. The main idea of multigrid is to accelerate the convergence of a basic iterative method (known as relaxation, which generally reduces short-wavelength error) by a ''global'' correction of the fine grid solution approximation from time to time, accomplished by solving a coarse problem. The coarse problem, while cheaper to solve, is similar to the fine grid problem in that it also has short- and long-wavelength errors ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
LOBPCG
Locally Optimal Block Preconditioned Conjugate Gradient (LOBPCG) is a matrix-free method for finding the largest (or smallest) eigenvalues and the corresponding eigenvectors of a symmetric generalized eigenvalue problem :A x= \lambda B x, for a given pair (A, B) of complex Hermitian or real symmetric matrices, where the matrix B is also assumed positive-definite. Background Kantorovich in 1948 proposed calculating the smallest eigenvalue \lambda_1 of a symmetric matrix A by steepest descent using a direction r = Ax-\lambda (x) x of a scaled gradient of a Rayleigh quotient \lambda(x) = (x, Ax)/(x, x) in a scalar product (x, y) = x'y, with the step size computed by minimizing the Rayleigh quotient in the linear span of the vectors x and w, i.e. in a locally optimal manner. Samokish proposed applying a preconditioner T to the residual vector r to generate the preconditioned direction w = T r and derived asymptotic, as x approaches the eigenvector, convergence rate bounds. D'yakonov ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
