Giant Barrel Sponge
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Giant Barrel Sponge
The giant barrel sponge (''Xestospongia muta'') is the largest species of sponge found growing on Caribbean coral reefs. It is common at depths greater than down to and can reach a diameter of 1.8 metres (6 feet). It is typically brownish-red to brownish-gray in color, with a hard or stony texture. The giant barrel sponge has been called the "redwood of the reef" because of its size and estimated lifespan of hundreds to a thousand or more years. It is perhaps the best-studied species of sponge in the sea; a population on Conch Reef, in the Florida Keys, has been monitored and studied since 1997. Description The giant barrel sponge is variable in form. It is very large and firm, typically being barrel-shaped, with a cone-shaped cavity at the apex known as the osculum. However, some individuals within the same population may be low and squat or relatively tall and thin. Similarly, the surface can range from smooth to rough, rugged, and irregular, sometimes with buttresses. In shal ...
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Sponge
Sponges, the members of the phylum Porifera (; meaning 'pore bearer'), are a basal animal clade as a sister of the diploblasts. They are multicellular organisms that have bodies full of pores and channels allowing water to circulate through them, consisting of jelly-like mesohyl sandwiched between two thin layers of cells. Sponges have unspecialized cells that can transform into other types and that often migrate between the main cell layers and the mesohyl in the process. Sponges do not have nervous, digestive or circulatory systems. Instead, most rely on maintaining a constant water flow through their bodies to obtain food and oxygen and to remove wastes. Sponges were first to branch off the evolutionary tree from the last common ancestor of all animals, making them the sister group of all other animals. Etymology The term ''sponge'' derives from the Ancient Greek word ( 'sponge'). Overview Sponges are similar to other animals in that they are multicellular, he ...
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Flagellum
A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates. A microorganism may have from one to many flagella. A gram-negative bacterium ''Helicobacter pylori'' for example uses its multiple flagella to propel itself through the mucus lining to reach the stomach epithelium, where it may cause a gastric ulcer to develop. In some bacteria the flagellum can also function as a sensory organelle, being sensitive to wetness outside the cell. Across the three domains of Bacteria, Archaea, and Eukaryota the flagellum has a different structure, protein composition, and mechanism of propulsion but shares the same function of providing motility. The Latin word means " whip" to describe its lash-like swimming motion. The flagellum in archaea is called the archaellum to note its difference from the bacterial flagellum. Eukaryotic ...
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Nitrification
''Nitrification'' is the biological oxidation of ammonia to nitrite followed by the oxidation of the nitrite to nitrate occurring through separate organisms or direct ammonia oxidation to nitrate in comammox bacteria. The transformation of ammonia to nitrite is usually the rate limiting step of nitrification. Nitrification is an important step in the nitrogen cycle in soil. Nitrification is an aerobic process performed by small groups of autotrophic bacteria and archaea. Microbiology Ammonia oxidation The oxidation of ammonia into nitrite (also known as nitritation) is performed by two groups of organisms, ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA). AOB AOB can be found among the Betaproteobacteria and Gammaproteobacteria. Since discovery of AOA in 2005, two isolates have been cultivated: ''Nitrosopumilus maritimus'' and ''Nitrososphaera viennensis''. In soils the most studied AOB belong to the genera ''Nitrosomonas'' and '' Nitrococcus''. AOA ...
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Primary Producers
An autotroph or primary producer is an organism that produces complex organic compounds (such as carbohydrates, fats, and proteins) using carbon from simple substances such as carbon dioxide,Morris, J. et al. (2019). "Biology: How Life Works", 3rd edition, W. H. Freeman. generally using energy from light (photosynthesis) or inorganic chemical reactions (chemosynthesis). They convert an abiotic source of energy (e.g. light) into energy stored in organic compounds, which can be used by other organisms (e.g. heterotrophs). Autotrophs do not need a living source of carbon or energy and are the producers in a food chain, such as plants on land or algae in water (in contrast to heterotrophs as consumers of autotrophs or other heterotrophs). Autotrophs can reduce carbon dioxide to make organic compounds for biosynthesis and as stored chemical fuel. Most autotrophs use water as the reducing agent, but some can use other hydrogen compounds such as hydrogen sulfide. The primary prod ...
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Parrotfish
Parrotfishes are a group of about 90 fish species regarded as a Family (biology), family (Scaridae), or a subfamily (Scarinae) of the wrasses. With about 95 species, this group's largest species richness is in the Indo-Pacific. They are found in coral reefs, rocky coasts, and seagrass beds, and can play a significant role in bioerosion. Description Parrotfish are named for their dentition, which is distinct from other fish, including other labrids. Their numerous teeth are arranged in a tightly packed mosaic on the external surface of their jaw bones, forming a parrot-like beak with which they rasp algae from coral and other rocky substrates (which contributes to the process of bioerosion). Maximum sizes vary within the family, with the majority of species reaching in length. However, a few species reach lengths in excess of , and the green humphead parrotfish can reach up to . The smallest species is the Cryptotomus roseus, bluelip parrotfish (''Cryptotomus roseus''), which ...
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Commensalism
Commensalism is a long-term biological interaction (symbiosis) in which members of one species gain benefits while those of the other species neither benefit nor are harmed. This is in contrast with mutualism, in which both organisms benefit from each other; amensalism, where one is harmed while the other is unaffected; parasitism, where one is harmed and the other benefits, and parasitoidism, which is similar to parasitism but the parasitoid has a free-living state and instead of just harming its host, it eventually ends up killing it. The commensal (the species that benefits from the association) may obtain nutrients, shelter, support, or locomotion from the host species, which is substantially unaffected. The commensal relation is often between a larger host and a smaller commensal; the host organism is unmodified, whereas the commensal species may show great structural adaptation consistent with its habits, as in the remoras that ride attached to sharks and other fishes. Remo ...
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Cyanobacteria
Cyanobacteria (), also known as Cyanophyta, are a phylum of gram-negative bacteria that obtain energy via photosynthesis. The name ''cyanobacteria'' refers to their color (), which similarly forms the basis of cyanobacteria's common name, blue-green algae, although they are not usually scientifically classified as algae. They appear to have originated in a freshwater or terrestrial environment. Sericytochromatia, the proposed name of the paraphyletic and most basal group, is the ancestor of both the non-photosynthetic group Melainabacteria and the photosynthetic cyanobacteria, also called Oxyphotobacteria. Cyanobacteria use photosynthetic pigments, such as carotenoids, phycobilins, and various forms of chlorophyll, which absorb energy from light. Unlike heterotrophic prokaryotes, cyanobacteria have internal membranes. These are flattened sacs called thylakoids where photosynthesis is performed. Phototrophic eukaryotes such as green plants perform photosynthesis in plast ...
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Symbiosis
Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or parasitic. The organisms, each termed a symbiont, must be of different species. In 1879, Heinrich Anton de Bary defined it as "the living together of unlike organisms". The term was subject to a century-long debate about whether it should specifically denote mutualism, as in lichens. Biologists have now abandoned that restriction. Symbiosis can be obligatory, which means that one or more of the symbionts depend on each other for survival, or facultative (optional), when they can generally live independently. Symbiosis is also classified by physical attachment. When symbionts form a single body it is called conjunctive symbiosis, while all other arrangements are called disjunctive symbiosis."symbiosis." Dorland's Illustrated Medical Dictionary. ...
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Dioecious
Dioecy (; ; adj. dioecious , ) is a characteristic of a species, meaning that it has distinct individual organisms (unisexual) that produce male or female gametes, either directly (in animals) or indirectly (in seed plants). Dioecious reproduction is biparental reproduction. Dioecy has costs, since only about half the population directly produces offspring. It is one method for excluding self-fertilization and promoting allogamy (outcrossing), and thus tends to reduce the expression of recessive deleterious mutations present in a population. Plants have several other methods of preventing self-fertilization including, for example, dichogamy, herkogamy, and self-incompatibility. Dioecy is a dimorphic sexual system, alongside gynodioecy and androdioecy. In zoology In zoology, dioecious species may be opposed to hermaphroditic species, meaning that an individual is either male or female, in which case the synonym gonochory is more often used. Most animal species are dioecious (gon ...
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Phagocytosis
Phagocytosis () is the process by which a cell uses its plasma membrane to engulf a large particle (≥ 0.5 μm), giving rise to an internal compartment called the phagosome. It is one type of endocytosis. A cell that performs phagocytosis is called a phagocyte. In a multicellular organism's immune system, phagocytosis is a major mechanism used to remove pathogens and cell debris. The ingested material is then digested in the phagosome. Bacteria, dead tissue cells, and small mineral particles are all examples of objects that may be phagocytized. Some protozoa use phagocytosis as means to obtain nutrients. History Phagocytosis was first noted by Canadian physician William Osler (1876), and later studied and named by Élie Metchnikoff (1880, 1883). In immune system Phagocytosis is one main mechanisms of the innate immune defense. It is one of the first processes responding to infection, and is also one of the initiating branches of an adaptive immune response. Although mo ...
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Prochlorophyta
Prochlorophyta is a group of photosynthetic bacteria, an important component of picoplankton. These oligotrophic organisms are abundant in nutrient poor tropical waters and use a unique photosynthetic pigment, divinyl-chlorophyll, to absorb light and acquire energy. Prochlorophyta lack red and blue phycobilin pigments and have stacked thylakoids, making them distinctly different from Cyanobacteria (or Cyanophyta), but some authors consider them as part of the Cyanobacteria, as the group Prochlorales. Discovery and naming This unique group of phytoplankton, with no phycobilin pigments, were initially found in 1975 near the Great Barrier Reef and off the coast of Mexico (''Prochloron''). Prochlorophyta was soon assigned as a new algal sub-class in 1976 by Ralph A. Lewin of the Scripps Institution of Oceanography. Other phytoplankton that lacked phycobilin pigments were later found in freshwater lakes in the Netherlands by Tineke Burger-Wiersma and colleagues and were termed ''Proc ...
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