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Genotype–phenotype Map
The genotype–phenotype map is a conceptual model in genetic architecture. Coined in a 1991 paper by Pere Alberch, it models the interdependency of genotype (an organism's full hereditary information) with phenotype (an organism's actual observed properties). Application The map visualises a relationship between genotype & phenotype which, crucially: # is of greater complexity than a straightforward one-to-one mapping of genotype to/from phenotype. # accommodates a parameter space, along which at different points a given phenotype is said to be more or less stable. # accommodates transformational boundaries in the parameter space, which divide phenotype states from one another. # accounts for different polymorphism and/or polyphenism A polyphenic trait is a trait for which multiple, discrete phenotypes can arise from a single genotype as a result of differing environmental conditions. It is therefore a special case of phenotypic plasticity. There are several types of pol ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Genetic Architecture
Genetic architecture is the underlying genetic basis of a phenotypic trait and its variational properties. Phenotypic variation for quantitative traits is, at the most basic level, the result of the segregation of alleles at quantitative trait loci (QTL). Environmental factors and other external influences can also play a role in phenotypic variation. Genetic architecture is a broad term that can be described for any given individual based on information regarding gene and allele number, the distribution of allelic and mutational effects, and patterns of pleiotropy, dominance, and epistasis. There are several different experimental views of genetic architecture. Some researchers recognize that the interplay of various genetic mechanisms is incredibly complex, but believe that these mechanisms can be averaged and treated, more or less, like statistical noise. Other researchers claim that each and every gene interaction is significant and that it is necessary to measure and model ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Pere Alberch
Pere Alberch Vie (2 November 1954, Badalona – 13 March 1998, Madrid) was a Spanish naturalist, biologist and embryologist. He was a professor at Harvard University from 1980 to 1989, and director of the Museo Nacional de Ciencias Naturales, Madrid. He studied in the United States, earning a bachelor's degree from the University of Kansas (1976) and a PhD from the University of California, Berkeley (1980). Biography In 1976 he graduated after studying Biology and Environmental Sciences at the University of Kansas. Four years later he obtained a PhD in Zoology at the University of California. Between 1980 and 1989 he worked as both a biology professor at Harvard University and as a curator of herpetology at the Museum of Comparative Zoology. He worked as an editor for magazines such as ''Trends in Ecology and Evolution'' (since 1993), ''Biodiversity Letters'' (since 1992), ''Journal of Theoretical Biology'' (since 1985) and ''Journal of Evolutionary Biology'' (1986-1991) ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Genotype
The genotype of an organism is its complete set of genetic material. Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location. The number of alleles an individual can have in a specific gene depends on the number of copies of each chromosome found in that species, also referred to as ploidy. In diploid species like humans, two full sets of chromosomes are present, meaning each individual has two alleles for any given gene. If both alleles are the same, the genotype is referred to as homozygous. If the alleles are different, the genotype is referred to as heterozygous. Genotype contributes to phenotype, the observable traits and characteristics in an individual or organism. The degree to which genotype affects phenotype depends on the trait. For example, the petal color in a pea plant is exclusively determined by genotype. The petals can be purple or white depending on the alleles present in the pea plant. Howev ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Hereditary
Heredity, also called inheritance or biological inheritance, is the passing on of traits from parents to their offspring; either through asexual reproduction or sexual reproduction, the offspring cells or organisms acquire the genetic information of their parents. Through heredity, variations between individuals can accumulate and cause species to evolve by natural selection. The study of heredity in biology is genetics. Overview In humans, eye color is an example of an inherited characteristic: an individual might inherit the "brown-eye trait" from one of the parents. Inherited traits are controlled by genes and the complete set of genes within an organism's genome is called its genotype. The complete set of observable traits of the structure and behavior of an organism is called its phenotype. These traits arise from the interaction of its genotype with the environment. As a result, many aspects of an organism's phenotype are not inherited. For example, suntanned skin ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Phenotype
In genetics, the phenotype () is the set of observable characteristics or traits of an organism. The term covers the organism's morphology or physical form and structure, its developmental processes, its biochemical and physiological properties, its behavior, and the products of behavior. An organism's phenotype results from two basic factors: the expression of an organism's genetic code, or its genotype, and the influence of environmental factors. Both factors may interact, further affecting phenotype. When two or more clearly different phenotypes exist in the same population of a species, the species is called polymorphic. A well-documented example of polymorphism is Labrador Retriever coloring; while the coat color depends on many genes, it is clearly seen in the environment as yellow, black, and brown. Richard Dawkins in 1978 and then again in his 1982 book ''The Extended Phenotype'' suggested that one can regard bird nests and other built structures such as cad ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Parameter Space
The parameter space is the space of possible parameter values that define a particular mathematical model, often a subset of finite-dimensional Euclidean space. Often the parameters are inputs of a function, in which case the technical term for the parameter space is domain of a function. The ranges of values of the parameters may form the axes of a plot, and particular outcomes of the model may be plotted against these axes to illustrate how different regions of the parameter space produce different types of behavior in the model. In statistics, parameter spaces are particularly useful for describing parametric families of probability distributions. They also form the background for parameter estimation. In the case of extremum estimators for parametric models, a certain objective function is maximized or minimized over the parameter space. Theorems of existence and consistency of such estimators require some assumptions about the topology of the parameter space. For instance, com ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Transform Fault
A transform fault or transform boundary, is a fault along a plate boundary where the motion is predominantly horizontal. It ends abruptly where it connects to another plate boundary, either another transform, a spreading ridge, or a subduction zone. A transform fault is a special case of a ''strike-slip fault'' that also forms a plate boundary. Most such faults are found in oceanic crust, where they accommodate the lateral offset between segments of divergent boundaries, forming a zigzag pattern. This is a result of oblique seafloor spreading where the direction of motion is not perpendicular to the trend of the overall divergent boundary. A smaller number of such faults are found on land, although these are generally better-known, such as the San Andreas Fault and North Anatolian Fault. Nomenclature Transform boundaries are also known as conservative plate boundaries because they involve no addition or loss of lithosphere at the Earth's surface. Background Geophysicist ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Phenotypic Trait
A phenotypic trait, simply trait, or character state is a distinct variant of a phenotypic characteristic of an organism; it may be either inherited or determined environmentally, but typically occurs as a combination of the two.Lawrence, Eleanor (2005) ''Henderson's Dictionary of Biology''. Pearson, Prentice Hall. For example, having eye color is a ''character'' of an organism, while blue, brown and hazel versions of eye colour are ''traits''. The term ''trait'' is generally used in genetics, often to describe phenotypic expression of different combinations of alleles in different individual organisms within a single population, such as the famous purple vs. white flower coloration in Gregor Mendel's pea plants. By contrast, in systematics, the term is ''character state'' is employed to describe features that represent fixed diagnostic differences among taxa, such as the absence of tails in great apes, relative to other primate groups. Definition A phenotypic trait is ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Gene Polymorphism
A gene is said to be polymorphic if more than one allele occupies that gene's locus within a population. In addition to having more than one allele at a specific locus, each allele must also occur in the population at a rate of at least 1% to generally be considered polymorphic. Gene polymorphisms can occur in any region of the genome. The majority of polymorphisms are silent, meaning they do not alter the function or expression of a gene. Some polymorphisms are visible. For example, in dogs the E locus can have any of five different alleles, known as E, Em, Eg, Eh, and e. Varying combinations of these alleles contribute to the pigmentation and patterns seen in dog coats. A polymorphic variant of a gene can lead to the abnormal expression or to the production of an abnormal form of the protein; this abnormality may cause or be associated with disease. For example, a polymorphic variant of the gene encoding the enzyme CYP4A11, in which thymidine replaces cytosine at the gene's nu ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Polyphenism
A polyphenic trait is a trait for which multiple, discrete phenotypes can arise from a single genotype as a result of differing environmental conditions. It is therefore a special case of phenotypic plasticity. There are several types of polyphenism in animals, from having sex determined by the environment to the castes of honey bees and other social insects. Some polyphenisms are seasonal, as in some butterflies which have different patterns during the year, and some Arctic animals like the snowshoe hare and Arctic fox, which are white in winter. Other animals have predator-induced or resource polyphenisms, allowing them to exploit variations in their environment. Some nematode worms can develop either into adults or into resting dauer larvae according to resource availability. Definition upright=1.2, Polyphenism in termites A : Primary king B : Primary queen C : Secondary queen D : Tertiary queen E : Soldiers F : Worker A polyphenism is the occurr ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Genetics
Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar working in the 19th century in Brno, was the first to study genetics scientifically. Mendel studied "trait inheritance", patterns in the way traits are handed down from parents to offspring over time. He observed that organisms (pea plants) inherit traits by way of discrete "units of inheritance". This term, still used today, is a somewhat ambiguous definition of what is referred to as a gene. Trait inheritance and molecular inheritance mechanisms of genes are still primary principles of genetics in the 21st century, but modern genetics has expanded to study the function and behavior of genes. Gene structure and function, variation, and distribution are studied within the context of the cell, the organism (e.g. dominance), and within the ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
