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Thiomargarita Nelsonii
''Thiomargarita'' is a genus (family Thiotrichaceae) which includes the vacuolate sulfur bacteria species ''Thiomargarita namibiensis'', ''Candidatus Thiomargarita nelsonii'', and ''Ca. Thiomargarita joergensii''. In 2022, scientists working in a Caribbean mangrove discovered an extremely large member of the genus, provisionally named '' T. magnifica'', whose cells are easily visible to the naked eye at up to long. Representatives of this genus can be found in a variety of environments that are rich in hydrogen sulfide, including methane seeps, mud volcanoes, brine pools, and organic-rich sediments such as those found beneath the Benguela Current and Humboldt Current. These bacteria are generally considered to be chemolithotrophs that utilize reduced inorganic species of sulfur as metabolic electron donors to produce energy for the fixation of carbon into biomass. Carbon fixation occurs via the Calvin Benson Bassham cycle and possibly the reverse Krebs cycle The ...
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Thiomargarita Namibiensis
''Thiomargarita namibiensis'' is a Gram-negative coccoid bacterium, found in the ocean sediments of the continental shelf of Namibia. It is the second largest bacterium ever discovered, as a rule in diameter, but sometimes attaining . Cells of ''Thiomargarita namibiensis'' are large enough to be visible to the naked eye. Although the species held the record for the largest known bacterium, ''Epulopiscium fishelsoni'' – previously discovered in the gut of surgeonfish – grows slightly longer, but narrower. ''Thiomargarita'' means "sulfur pearl". This refers to the appearance of the cells; they contain microscopic sulfur granules that scatter incident light, lending the cell a pearly lustre. Like many coccoid bacteria such as ''Streptococcus'', their cellular division tends to occur along a single axis, causing their cells to form chains, rather like strings of pearls. The species name ''namibiensis'' means "of Namibia". Occurrence The species was discovered by Heide N. Sch ...
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Humboldt Current
The Humboldt Current, also called the Peru Current, is a cold, low- salinity ocean current that flows north along the western coast of South America.Montecino, Vivian, and Carina B. Lange. "The Humboldt Current System: Ecosystem components and processes, fisheries, and sediment studies." ''Progress in Oceanography'' 83.1 (2009): 65-79. DOI10.1016/j.pocean.2009.07.041/ref> It is an eastern boundary current flowing in the direction of the equator, and extends offshore. The Humboldt Current is named after the German naturalist Alexander von Humboldt even though it was discovered by José de Acosta 250 years before Humboldt. In 1846, von Humboldt reported measurements of the cold-water current in his book ''Cosmos''. The current extends from southern Chile (~ 45th parallel south) to northern Peru (~ 4th parallel south) where cold, upwelled, waters intersect warm tropical waters to form the Equatorial Front. Sea surface temperatures off the coast of Peru, around 5th parallel sout ...
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Thiotrichales
The Thiotrichales are an order of Pseudomonadota, including '' Thiomargarita magnifica'', the largest known bacterium.George M. Garrity: ''Bergey's Manual of Systematic Bacteriology''. 2. Auflage. Springer, New York, 2005, Volume 2: ''The Proteobacteria, Part B: The Gammaproteobacteria'' They also include certain pathogens, such as ''Francisella tularensis ''Francisella tularensis'' is a pathogenic species of Gram-negative coccobacillus, an aerobic bacterium. It is nonspore-forming, nonmotile, and the causative agent of tularemia, the pneumonic form of which is often lethal without treatment. It ...'' which causes tularemia (rabbit fever). References Gammaproteobacteria {{gammaproteobacteria-stub ...
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Reverse Krebs Cycle
The reverse Krebs cycle (also known as the reverse tricarboxylic acid cycle, the reverse TCA cycle, or the reverse citric acid cycle, or the reductive tricarboxylic acid cycle, or the reductive TCA cycle) is a sequence of chemical reactions that are used by some bacteria to produce carbon compounds from carbon dioxide and water by the use of energy-rich reducing agents as electron donors. The reaction is the citric acid cycle run in reverse. Where the Krebs cycle takes carbohydrates and oxidizes them to CO2 and water, the reverse cycle takes CO2 and H2O to make carbon compounds. This process is used by some bacteria (such as Aquificota) to synthesize carbon compounds, sometimes using hydrogen, sulfide, or thiosulfate as electron donors. This process can be seen as an alternative to the fixation of inorganic carbon in the reductive pentose phosphate cycle which occurs in a wide variety of microbes and higher organisms. Differences from Krebs cycle In contrast to the oxidative c ...
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Light-independent Reactions
The Calvin cycle, light-independent reactions, bio synthetic phase, dark reactions, or photosynthetic carbon reduction (PCR) cycle of photosynthesis is a series of chemical reactions that convert carbon dioxide and hydrogen-carrier compounds into glucose. The Calvin cycle is present in all photosynthetic eukaryotes and also many photosynthetic bacteria. In plants, these reactions occur in the stroma, the fluid-filled region of a chloroplast outside the thylakoid membranes. These reactions take the products ( ATP and NADPH) of light-dependent reactions and perform further chemical processes on them. The Calvin cycle uses the chemical energy of ATP and reducing power of NADPH from the light dependent reactions to produce sugars for the plant to use. These substrates are used in a series of reduction-oxidation reactions to produce sugars in a step-wise process; there is no direct reaction that converts several molecules of to a sugar. There are three phases to the light-independent ...
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Carbon Fixation
Biological carbon fixation or сarbon assimilation is the process by which inorganic carbon (particularly in the form of carbon dioxide) is converted to organic compounds by living organisms. The compounds are then used to store energy and as structure for other biomolecules. Carbon is primarily fixed through photosynthesis, but some organisms use a process called chemosynthesis in the absence of sunlight. Organisms that grow by fixing carbon are called autotrophs, which include photoautotrophs (which use sunlight), and lithoautotrophs (which use inorganic oxidation). Heterotrophs are not themselves capable of carbon fixation but are able to grow by consuming the carbon fixed by autotrophs or other heterotrophs. "Fixed carbon", "reduced carbon", and "organic carbon" may all be used interchangeably to refer to various organic compounds. Chemosynthesis is carbon fixation driven by chemical energy, rather than from sunlight. Sulfur- and hydrogen-oxidizing bacteria often use the ...
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Biomass
Biomass is plant-based material used as a fuel for heat or electricity production. It can be in the form of wood, wood residues, energy crops, agricultural residues, and waste from industry, farms, and households. Some people use the terms biomass and biofuel interchangeably, while others consider biofuel to be a ''liquid'' or ''gaseous'' fuel used for transportation, as defined by government authorities in the US and EU. The European Union's Joint Research Centre defines solid biofuel as raw or processed organic matter of biological origin used for energy, such as firewood, wood chips, and wood pellets. In 2019, biomass was used to produce 57 EJ (exajoules) of energy, compared to 190 EJ from crude oil, 168 EJ from coal, 144 EJ from natural gas, 30 EJ from nuclear, 15 EJ from hydro and 13 EJ from wind, solar and geothermal combined. Approximately 86% of modern bioenergy is used for heating applications, with 9% used for transport and 5% for electricity. Most of the global b ...
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Electron Donor
In chemistry, an electron donor is a chemical entity that donates electrons to another compound. It is a reducing agent that, by virtue of its donating electrons, is itself oxidized in the process. Typical reducing agents undergo permanent chemical alteration through covalent or ionic reaction chemistry. This results in the complete and irreversible transfer of one or more electrons. In many chemical circumstances, however, the transfer of electronic charge to an electron acceptor may be only fractional, meaning an electron is not completely transferred, but results in an electron resonance between the donor and acceptor. This leads to the formation of charge transfer complexes in which the components largely retain their chemical identities. The electron donating power of a donor molecule is measured by its ionization potential which is the energy required to remove an electron from the highest occupied molecular orbital (HOMO). The overall energy balance (ΔE), i.e., energ ...
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Sulfur
Sulfur (or sulphur in British English) is a chemical element with the symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms form cyclic octatomic molecules with a chemical formula S8. Elemental sulfur is a bright yellow, crystalline solid at room temperature. Sulfur is the tenth most abundant element by mass in the universe and the fifth most on Earth. Though sometimes found in pure, native form, sulfur on Earth usually occurs as sulfide and sulfate minerals. Being abundant in native form, sulfur was known in ancient times, being mentioned for its uses in ancient India, ancient Greece, China, and ancient Egypt. Historically and in literature sulfur is also called brimstone, which means "burning stone". Today, almost all elemental sulfur is produced as a byproduct of removing sulfur-containing contaminants from natural gas and petroleum.. Downloahere The greatest commercial use of the element is the production o ...
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Inorganic Compound
In chemistry, an inorganic compound is typically a chemical compound that lacks carbon–hydrogen bonds, that is, a compound that is not an organic compound. The study of inorganic compounds is a subfield of chemistry known as '' inorganic chemistry''. Inorganic compounds comprise most of the Earth's crust, although the compositions of the deep mantle remain active areas of investigation. Some simple carbon compounds are often considered inorganic. Examples include the allotropes of carbon (graphite, diamond, buckminsterfullerene, etc.), carbon monoxide, carbon dioxide, carbides, and the following salts of inorganic anions: carbonates, cyanides, cyanates, and thiocyanates. Many of these are normal parts of mostly organic systems, including organisms; describing a chemical as inorganic does not necessarily mean that it does not occur within living things. History Friedrich Wöhler's conversion of ammonium cyanate into urea in 1828 is often cited as the starting point of modern ...
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Redox
Redox (reduction–oxidation, , ) is a type of chemical reaction in which the oxidation states of substrate (chemistry), substrate change. Oxidation is the loss of Electron, electrons or an increase in the oxidation state, while reduction is the gain of electrons or a decrease in the oxidation state. There are two classes of redox reactions: * ''Electron-transfer'' – Only one (usually) electron flows from the reducing agent to the oxidant. This type of redox reaction is often discussed in terms of redox couples and electrode potentials. * ''Atom transfer'' – An atom transfers from one substrate to another. For example, in the rusting of iron, the oxidation state of iron atoms increases as the iron converts to an oxide, and simultaneously the oxidation state of oxygen decreases as it accepts electrons released by the iron. Although oxidation reactions are commonly associated with the formation of oxides, other chemical species can serve the same function. In hydrogen ...
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