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Szeged Index
In chemical graph theory, the Szeged index is a topological index of a molecule, used in biochemistry. The Szeged index, introduced by Iván Gutman, generalizes the concept of the Wiener index introduced by Harry Wiener. The Szeged index of a connected graph ''G'' is defined as : Sz(G)=\sum_ n_1(e\mid G)n_2(e\mid G), If ''e'' is an edge of ''G'' connecting vertices ''u'' and ''v'', then we write ''e'' = ''uv'' or ''e'' = ''vu''. For e=uv\in E(G), let n_1(e\mid G) and n_2(e\mid G) be respectively the number of vertices of ''G'' lying closer to vertex ''u'' than to vertex ''v'' and the number of vertices of ''G'' lying closer to vertex ''v'' than to vertex ''u''. Szeged index plays an important role in information theory. One way to measure a network structure is through the so-called topological indices. Szeged index has been shown to correlate well with numerous biological Biology is the scientific study of life. It is a natural science with a ...
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Chemical Graph Theory
Chemical graph theory is the topology branch of mathematical chemistry which applies graph theory to mathematical modelling of chemical phenomena. The pioneers of chemical graph theory are Alexandru Balaban, Ante Graovac, Iván Gutman, Haruo Hosoya, Milan Randić and Nenad Trinajstić (also Harry Wiener and others). In 1988, it was reported that several hundred researchers worked in this area, producing about 500 articles annually. A number of monographs have been written in the area, including the two-volume comprehensive text by Trinajstić, ''Chemical Graph Theory'', that summarized the field up to mid-1980s. The adherents of the theory maintain that the properties of a chemical graph (i.e., a graph-theoretical representation of a molecule) give valuable insights into the chemical phenomena. Others contend that graphs play only a fringe role in chemical research.D.H. Rouvray, "Combinatorics in Chemistry", pp. 1955-1982, in: Ronald Graham, Martin Grötschel, László Lovász (E ...
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Topological Index
In the fields of chemical graph theory, molecular topology, and mathematical chemistry, a topological index, also known as a connectivity index, is a type of a molecular descriptor that is calculated based on the molecular graph of a chemical compound. Topological indices are numerical parameters of a graph which characterize its topology and are usually graph invariant. Topological indices are used for example in the development of quantitative structure-activity relationships (QSARs) in which the biological activity or other properties of molecules are correlated with their chemical structure. Calculation Topological descriptors are derived from hydrogen-suppressed molecular graphs, in which the atoms are represented by vertices and the bonds by edges. The connections between the atoms can be described by various types of topological matrices (e.g., distance or adjacency matrices), which can be mathematically manipulated so as to derive a single number, usually known as grap ...
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Molecule
A molecule is a group of two or more atoms held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions which satisfy this criterion. In quantum physics, organic chemistry, and biochemistry, the distinction from ions is dropped and ''molecule'' is often used when referring to polyatomic ions. A molecule may be homonuclear, that is, it consists of atoms of one chemical element, e.g. two atoms in the oxygen molecule (O2); or it may be heteronuclear, a chemical compound composed of more than one element, e.g. water (two hydrogen atoms and one oxygen atom; H2O). In the kinetic theory of gases, the term ''molecule'' is often used for any gaseous particle regardless of its composition. This relaxes the requirement that a molecule contains two or more atoms, since the noble gases are individual atoms. Atoms and complexes connected by non-covalent interactions, such as hydrogen bonds or ionic bonds, are typically not consid ...
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Biochemistry
Biochemistry or biological chemistry is the study of chemical processes within and relating to living organisms. A sub-discipline of both chemistry and biology, biochemistry may be divided into three fields: structural biology, enzymology and metabolism. Over the last decades of the 20th century, biochemistry has become successful at explaining living processes through these three disciplines. Almost all areas of the life sciences are being uncovered and developed through biochemical methodology and research. Voet (2005), p. 3. Biochemistry focuses on understanding the chemical basis which allows biological molecules to give rise to the processes that occur within living cells and between cells,Karp (2009), p. 2. in turn relating greatly to the understanding of tissues and organs, as well as organism structure and function.Miller (2012). p. 62. Biochemistry is closely related to molecular biology, which is the study of the molecular mechanisms of biological phenomena.As ...
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Iván Gutman
Iván Gutman (born in 1947) is a Serbian chemist and mathematician. Life and work Gutman was born in Sombor, Yugoslavia in a Bunjevac family. In 1970 he graduated chemistry from the University of Belgrade where he worked a short time as an assistant at the Chemistry Department. From 1971 until 1976 he worked as Research Assistant and Senior Research Assistant at Ruđer Bošković Institute in Zagreb, Department of Physical Chemistry. In 1973 he received M.Sc. degree from the University of Zagreb, in the area of theoretical organic chemistry. In the same year he received a doctorate degree in chemistry from the University of Zagreb. His supervisor was Nenad Trinajstić. From 1977 he worked at the University of Kragujevac, eventually becoming a full research professor in 1982. In 1981 he received a doctorate degree in mathematics from the University of Belgrade. From 2012 he is a professor emeritus at the University of Kragujevac. His research interests are theoretical organic c ...
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Wiener Index
In chemical graph theory, the Wiener index (also Wiener number) introduced by Harry Wiener, is a topological index of a molecule, defined as the sum of the lengths of the shortest paths between all pairs of vertices in the chemical graph representing the non-hydrogen atoms in the molecule.. Wiener index can be used for the representation of computer networks and enhancing lattice hardware security. History The Wiener index is named after Harry Wiener, who introduced it in 1947; at the time, Wiener called it the "path number".. It is the oldest topological index related to molecular branching. Based on its success, many other topological indexes of chemical graphs, based on information in the distance matrix of the graph, have been developed subsequently to Wiener's work. The same quantity has also been studied in pure mathematics, under various names including the gross status, the distance of a graph,. and the transmission. The Wiener index is also closely related to the cl ...
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Harry Wiener
Harry Wiener (Oct. 29, 1924 in Vienna, Austria – Nov. 8, 1998 in New York City, USA) was an Austrian-American chemist, physician and psychologist, a pioneer in cheminformatics and chemical graph theory, and a long-time employee at Pfizer. Education and career Wiener was born in Vienna in 1924 to Jewish parents Joseph Wiener and Beile Wiener. His family emigrated to New York City, USA in 1941 by way of France and Portugal. Wiener attended Brooklyn College and received a BS in chemistry in 1945. Wiener attended Long Island College of Medicine and obtained an MD in 1949. Wiener was appointed to the management team at Pfizer in 1958 and remained at the company until 1995, when he retired. Achievements Wiener made important and fundamental contributions to the study of topological indices and established a correlation between the Wiener index and boiling points (hence viscosity and surface tension) of the paraffins. He laid the foundation of chemical graph theory, and built ...
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Information Theory
Information theory is the scientific study of the quantification (science), quantification, computer data storage, storage, and telecommunication, communication of information. The field was originally established by the works of Harry Nyquist and Ralph Hartley, in the 1920s, and Claude Shannon in the 1940s. The field is at the intersection of probability theory, statistics, computer science, statistical mechanics, information engineering (field), information engineering, and electrical engineering. A key measure in information theory is information entropy, entropy. Entropy quantifies the amount of uncertainty involved in the value of a random variable or the outcome of a random process. For example, identifying the outcome of a fair coin flip (with two equally likely outcomes) provides less information (lower entropy) than specifying the outcome from a roll of a dice, die (with six equally likely outcomes). Some other important measures in information theory are mutual informat ...
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Topological Indices
In the fields of chemical graph theory, molecular topology, and mathematical chemistry, a topological index, also known as a connectivity index, is a type of a molecular descriptor that is calculated based on the molecular graph of a chemical compound. Topological indices are numerical parameters of a graph which characterize its topology and are usually graph invariant. Topological indices are used for example in the development of quantitative structure-activity relationships (QSARs) in which the biological activity or other properties of molecules are correlated with their chemical structure. Calculation Topological descriptors are derived from hydrogen-suppressed molecular graphs, in which the atoms are represented by vertices and the bonds by edges. The connections between the atoms can be described by various types of topological matrices (e.g., distance or adjacency matrices), which can be mathematically manipulated so as to derive a single number, usually known as g ...
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Biological
Biology is the scientific study of life. It is a natural science with a broad scope but has several unifying themes that tie it together as a single, coherent field. For instance, all organisms are made up of cells that process hereditary information encoded in genes, which can be transmitted to future generations. Another major theme is evolution, which explains the unity and diversity of life. Energy processing is also important to life as it allows organisms to move, grow, and reproduce. Finally, all organisms are able to regulate their own internal environments. Biologists are able to study life at multiple levels of organization, from the molecular biology of a cell to the anatomy and physiology of plants and animals, and evolution of populations.Based on definition from: Hence, there are multiple subdisciplines within biology, each defined by the nature of their research questions and the tools that they use. Like other scientists, biologists use the scientific metho ...
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Physicochemical
Physical chemistry is the study of macroscopic and microscopic phenomena in chemical systems in terms of the principles, practices, and concepts of physics such as motion, energy, force, time, thermodynamics, quantum chemistry, statistical mechanics, analytical dynamics and chemical equilibria. Physical chemistry, in contrast to chemical physics, is predominantly (but not always) a supra-molecular science, as the majority of the principles on which it was founded relate to the bulk rather than the molecular or atomic structure alone (for example, chemical equilibrium and colloids). Some of the relationships that physical chemistry strives to resolve include the effects of: # Intermolecular forces that act upon the physical properties of materials (plasticity, tensile strength, surface tension in liquids). # Reaction kinetics on the rate of a reaction. # The identity of ions and the electrical conductivity of materials. # Surface science and electrochemistry of cell membranes. ...
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Dendrimer Nanostar
Dendrimers are highly ordered, branched polymeric molecules. Synonymous terms for dendrimer include arborols and cascade molecules. Typically, dendrimers are symmetric about the core, and often adopt a spherical three-dimensional morphology. The word dendron is also encountered frequently. A dendron usually contains a single chemically addressable group called the focal point or core. The difference between dendrons and dendrimers is illustrated in the top figure, but the terms are typically encountered interchangeably. The first dendrimers were made by divergent synthesis approaches by Fritz Vögtle in 1978, R.G. Denkewalter at Allied Corporation in 1981, Donald Tomalia at Dow Chemical in 1983 and in 1985, and by George R. Newkome in 1985. In 1990 a convergent synthetic approach was introduced by Craig Hawker and Jean Fréchet. Dendrimer popularity then greatly increased, resulting in more than 5,000 scientific papers and patents by the year 2005. Properties Dendriti ...
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