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Stress Majorization
Stress majorization is an optimization strategy used in multidimensional scaling (MDS) where, for a set of ''n'' ''m''-dimensional data items, a configuration ''X'' of n points in ''r (\ll m)''-dimensional space is sought that minimizes the so-called ''stress'' function \sigma(X). Usually ''r'' is 2 or 3, i.e. the ''(n\times r)'' matrix ''X'' lists points in 2- or 3-dimensional Euclidean space so that the result may be visualised (i.e. an MDS plot). The function \sigma is a cost or loss function that measures the squared differences between ideal (m-dimensional) distances and actual distances in ''r''-dimensional space. It is defined as: : \sigma(X)=\sum_w_(d_(X)-\delta_)^2 where w_\ge 0 is a weight for the measurement between a pair of points (i,j), d_(X) is the euclidean distance between i and j and \delta_ is the ideal distance between the points (their separation) in the m-dimensional data space. Note that w_ can be used to specify a degree of confidence in the similarity ...
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Optimization (mathematics)
Mathematical optimization (alternatively spelled ''optimisation'') or mathematical programming is the selection of a best element, with regard to some criterion, from some set of available alternatives. It is generally divided into two subfields: discrete optimization and continuous optimization. Optimization problems of sorts arise in all quantitative disciplines from computer science and engineering to operations research and economics, and the development of solution methods has been of interest in mathematics for centuries. In the more general approach, an optimization problem consists of maximizing or minimizing a real function by systematically choosing input values from within an allowed set and computing the value of the function. The generalization of optimization theory and techniques to other formulations constitutes a large area of applied mathematics. More generally, optimization includes finding "best available" values of some objective function given a define ...
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Multidimensional Scaling
Multidimensional scaling (MDS) is a means of visualizing the level of similarity of individual cases of a dataset. MDS is used to translate "information about the pairwise 'distances' among a set of n objects or individuals" into a configuration of n points mapped into an abstract Cartesian space. More technically, MDS refers to a set of related ordination techniques used in information visualization, in particular to display the information contained in a distance matrix. It is a form of non-linear dimensionality reduction. Given a distance matrix with the distances between each pair of objects in a set, and a chosen number of dimensions, ''N'', an MDS algorithm places each object into ''N''-dimensional space (a lower-dimensional representation) such that the between-object distances are preserved as well as possible. For ''N'' = 1, 2, and 3, the resulting points can be visualized on a scatter plot. Core theoretical contributions to MDS were made by James O. Ramsay of M ...
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Euclidean Space
Euclidean space is the fundamental space of geometry, intended to represent physical space. Originally, that is, in Euclid's Elements, Euclid's ''Elements'', it was the three-dimensional space of Euclidean geometry, but in modern mathematics there are Euclidean spaces of any positive integer dimension (mathematics), dimension, including the three-dimensional space and the ''Euclidean plane'' (dimension two). The qualifier "Euclidean" is used to distinguish Euclidean spaces from other spaces that were later considered in physics and modern mathematics. Ancient History of geometry#Greek geometry, Greek geometers introduced Euclidean space for modeling the physical space. Their work was collected by the Greek mathematics, ancient Greek mathematician Euclid in his ''Elements'', with the great innovation of ''mathematical proof, proving'' all properties of the space as theorems, by starting from a few fundamental properties, called ''postulates'', which either were considered as eviden ...
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MDS Plot
Multidimensional scaling (MDS) is a means of visualizing the level of similarity of individual cases of a dataset. MDS is used to translate "information about the pairwise 'distances' among a set of n objects or individuals" into a configuration of n points mapped into an abstract Cartesian space. More technically, MDS refers to a set of related ordination techniques used in information visualization, in particular to display the information contained in a distance matrix. It is a form of non-linear dimensionality reduction. Given a distance matrix with the distances between each pair of objects in a set, and a chosen number of dimensions, ''N'', an MDS algorithm places each object into ''N''-dimensional space (a lower-dimensional representation) such that the between-object distances are preserved as well as possible. For ''N'' = 1, 2, and 3, the resulting points can be visualized on a scatter plot. Core theoretical contributions to MDS were made by James O. Ramsay of M ...
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Loss Function
In mathematical optimization and decision theory, a loss function or cost function (sometimes also called an error function) is a function that maps an event or values of one or more variables onto a real number intuitively representing some "cost" associated with the event. An optimization problem seeks to minimize a loss function. An objective function is either a loss function or its opposite (in specific domains, variously called a reward function, a profit function, a utility function, a fitness function, etc.), in which case it is to be maximized. The loss function could include terms from several levels of the hierarchy. In statistics, typically a loss function is used for parameter estimation, and the event in question is some function of the difference between estimated and true values for an instance of data. The concept, as old as Laplace, was reintroduced in statistics by Abraham Wald in the middle of the 20th century. In the context of economics, for example, this i ...
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Euclidean Distance
In mathematics, the Euclidean distance between two points in Euclidean space is the length of a line segment between the two points. It can be calculated from the Cartesian coordinates of the points using the Pythagorean theorem, therefore occasionally being called the Pythagorean distance. These names come from the ancient Greek mathematicians Euclid and Pythagoras, although Euclid did not represent distances as numbers, and the connection from the Pythagorean theorem to distance calculation was not made until the 18th century. The distance between two objects that are not points is usually defined to be the smallest distance among pairs of points from the two objects. Formulas are known for computing distances between different types of objects, such as the distance from a point to a line. In advanced mathematics, the concept of distance has been generalized to abstract metric spaces, and other distances than Euclidean have been studied. In some applications in statistic ...
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Steepest Descent
In mathematics, gradient descent (also often called steepest descent) is a first-order iterative optimization algorithm for finding a local minimum of a differentiable function. The idea is to take repeated steps in the opposite direction of the gradient (or approximate gradient) of the function at the current point, because this is the direction of steepest descent. Conversely, stepping in the direction of the gradient will lead to a local maximum of that function; the procedure is then known as gradient ascent. Gradient descent is generally attributed to Augustin-Louis Cauchy, who first suggested it in 1847. Jacques Hadamard independently proposed a similar method in 1907. Its convergence properties for non-linear optimization problems were first studied by Haskell Curry in 1944, with the method becoming increasingly well-studied and used in the following decades. Description Gradient descent is based on the observation that if the multi-variable function F(\mathbf) is def ...
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Jan De Leeuw
Jan de Leeuw (born December 19, 1945) is a Dutch statistician and psychometrician. He is distinguished professor emeritus of statistics and founding chair of the Department of Statistics, University of California, Los Angeles. In addition, he is the founding editor and former editor-in-chief of the ''Journal of Statistical Software'', as well as the former editor-in-chief of the ''Journal of Multivariate Analysis'' and the ''Journal of Educational and Behavioral Statistics''. Biography Born in Voorburg, De Leeuw attended the Hogere Burgerschool in Voorburg and Alphen aan den Rijn from 1957 to 1963. He studied at Leiden University, where he received his propedeutic examination psychology summa cum laude in 1964; his candidate examination psychology summa cum laude in 1967; and his doctoral examination psychology summa cum laude in 1969. In 1973 he received his PhD cum laude with a thesis entitled "Canonical Analysis of Categorical Data" advised by John P. van de Geer. The thesis ...
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Convex Analysis
Convex analysis is the branch of mathematics devoted to the study of properties of convex functions and convex sets, often with applications in convex minimization, a subdomain of optimization theory. Convex sets A subset C \subseteq X of some vector space X is if it satisfies any of the following equivalent conditions: #If 0 \leq r \leq 1 is real and x, y \in C then r x + (1 - r) y \in C. #If 0 is a if holds for any real 0 is called if \operatorname f \neq \varnothing and f(x) > -\infty for x \in \operatorname f. Alternatively, this means that there exists some x in the domain of f at which f(x) \in \mathbb and f is also equal to -\infty. In words, a function is if its domain is not empty, it never takes on the value -\infty, and it also is not identically equal to +\infty. If f : \mathbb^n \to \infty, \infty/math> is a proper convex function then there exist some vector b \in \mathbb^n and some r \in \mathbb such that :f(x) \geq x \cdot b - r for every x where ...
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Hessian Matrix
In mathematics, the Hessian matrix or Hessian is a square matrix of second-order partial derivatives of a scalar-valued function, or scalar field. It describes the local curvature of a function of many variables. The Hessian matrix was developed in the 19th century by the German mathematician Ludwig Otto Hesse and later named after him. Hesse originally used the term "functional determinants". Definitions and properties Suppose f : \R^n \to \R is a function taking as input a vector \mathbf \in \R^n and outputting a scalar f(\mathbf) \in \R. If all second-order partial derivatives of f exist, then the Hessian matrix \mathbf of f is a square n \times n matrix, usually defined and arranged as follows: \mathbf H_f= \begin \dfrac & \dfrac & \cdots & \dfrac \\ .2ex \dfrac & \dfrac & \cdots & \dfrac \\ .2ex \vdots & \vdots & \ddots & \vdots \\ .2ex \dfrac & \dfrac & \cdots & \dfrac \end, or, by stating an equation for the coefficients using indices i and j, (\mathbf H_f)_ = \fra ...
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Matrix Trace
In linear algebra, the trace of a square matrix , denoted , is defined to be the sum of elements on the main diagonal (from the upper left to the lower right) of . The trace is only defined for a square matrix (). It can be proved that the trace of a matrix is the sum of its (complex) eigenvalues (counted with multiplicities). It can also be proved that for any two matrices and . This implies that similar matrices have the same trace. As a consequence one can define the trace of a linear operator mapping a finite-dimensional vector space into itself, since all matrices describing such an operator with respect to a basis are similar. The trace is related to the derivative of the determinant (see Jacobi's formula). Definition The trace of an square matrix is defined as \operatorname(\mathbf) = \sum_^n a_ = a_ + a_ + \dots + a_ where denotes the entry on the th row and th column of . The entries of can be real numbers or (more generally) complex numbers. The trace is not def ...
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