Stenotrophomonas Virus IME15
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Stenotrophomonas Virus IME15
''Stenotrophomonas'' is a genus of Gram-negative bacteria, comprising at least ten species. The main reservoirs of Stenotrophomonas are soil and plants. ''Stenotrophomonas'' species range from common soil organisms (''S. nitritireducens'') to opportunistic human pathogens ('' S. maltophilia''); the molecular taxonomy of the genus is still somewhat unclear. Importance The most common species, ''S. maltophilia'' is very versatile and can be beneficial for plant growth and health, can be used in agriculture, biocontrol, bioremediation and phytoremediation strategies as well as the production of biomolecules of economic value. On the other hand, some of '' S. maltophilia'' strains are pathogenic to humans with multidrug resistant profile. ''S. indologenes'' can also cause or be part of polymicrobial infections in humans, especially small children. ''Stenotrophomonas'' can also be phytopathogenic unlike closely related genera ''Xylella'' and '' Xanthomonas''. Members of the genus ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Stenotrophomonas Nitritireducens
''Stenotrophomonas nitritireducens'' is a yellow-pigmented bacteria, named after its quality to reduce nitrite The nitrite polyatomic ion, ion has the chemical formula . Nitrite (mostly sodium nitrite) is widely used throughout chemical and pharmaceutical industries. The nitrite anion is a pervasive intermediate in the nitrogen cycle in nature. The name .... It is a common soil bacteria. Its type strain is L2T (= DSM 12575T). ''Stenotrophomonas nitritireducens'' has the ability to transform unsaturated fatty acids into hydroxy fatty acids. Hydroxy acids are incredibly important as they are the precursors of dicarboxylic acids and lactones and are one of the starting substances of polymers. References Further reading * * *Ramos, Patrícia Locosque, et al. "An MLSA-based online scheme for the rapid identification of Stenotrophomonas isolates." Memórias do Instituto Oswaldo Cruz 106.4 (2011): 394–399. External links *LPSN
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Rhizosphere
The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microorganisms that feed on sloughed-off plant cells, termed ''rhizodeposition'', and the proteins and sugars released by roots, termed root exudates. This symbiosis leads to more complex interactions, influencing plant growth and competition for resources. Much of the nutrient cycling and disease suppression by antibiotics required by plants, occurs immediately adjacent to roots due to root exudates and metabolic products of symbiotic and pathogenic communities of microorganisms. The rhizosphere also provides space to produce allelochemicals to control neighbours and relatives. The ''rhizoplane'' refers to the root surface including its associated soil particles which closely interact with each other. The plant-soil feedback loop and other p ...
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Xanthomonas
''Xanthomonas'' (from greek: ''xanthos'' – “yellow”; ''monas'' – “entity”) is a genus of bacteria, many of which cause plant diseases. There are at least 27 plant associated ''Xanthomonas spp.'', that all together infect at least 400 plant species. Different species typically have specific host and/or tissue range and colonization strategies. Taxonomy The genus ''Xanthomonas'' has been subject of numerous taxonomic and phylogenetic studies and was first described as ''Bacterium vesicatorium'' as a pathogen of pepper and tomato in 1921. Dowson later reclassified the bacterium as ''Xanthomonas campestris'' and proposed the genus ''Xanthomonas''.''Xanthomonas'' was first described as a monotypic genus and further research resulted in the division into two groups, A and B. Later work using DNA:DNA hybridization has served as a framework for the general ''Xanthomonas'' species classification. Other tools, including multilocus sequence analysis and amplified fragment-length ...
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Xylella Fastidiosa
''Xylella fastidiosa'' is an aerobic, Gram-negative bacterium, Gram-negative bacterium of the genus ''Xylella''. It is a plant pathogen, that grows in the water transport tissues of plants (Xylem, xylem vessels) and is transmitted exclusively by xylem sap-feeding insects such as Sharpshooter (insect), sharpshooters and Aphrophoridae, spittlebugs. Many plant diseases are due to infections of ''X. fastidiosa'', including bacterial leaf scorch, oleander leaf scorch, coffee leaf scorch (CLS), alfalfa dwarf, phony peach disease, and the economically important Pierce's disease of grapes (PD), olive quick decline syndrome (OQDS), and citrus variegated chlorosis (CVC). While the largest outbreaks of ''X. fastidiosa''–related diseases have occurred in the Americas and Europe, this pathogen has also been found in Taiwan, Israel, and a few other countries worldwide. ''Xylella fastidiosa'' can infect an extremely wide range of plants, many of which do not show any symptoms of disease. Dise ...
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Multiple Drug Resistance
Multiple drug resistance (MDR), multidrug resistance or multiresistance is antimicrobial resistance shown by a species of microorganism to at least one antimicrobial drug in three or more antimicrobial categories. Antimicrobial categories are classifications of antimicrobial agents based on their mode of action and specific to target organisms. The MDR types most threatening to public health are MDR bacteria that resist multiple antibiotics; other types include MDR viruses, parasites (resistant to multiple antifungal, antiviral, and antiparasitic drugs of a wide chemical variety). Recognizing different degrees of MDR in bacteria, the terms extensively drug-resistant (XDR) and pandrug-resistant (PDR) have been introduced. Extensively drug-resistant (XDR) is the non-susceptibility of one bacteria species to all antimicrobial agents except in two or less antimicrobial categories. Within XDR, pandrug-resistant (PDR) is the non-susceptibility of bacteria to all antimicrobial agents i ...
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Taxonomy (biology)
In biology, taxonomy () is the scientific study of naming, defining ( circumscribing) and classifying groups of biological organisms based on shared characteristics. Organisms are grouped into taxa (singular: taxon) and these groups are given a taxonomic rank; groups of a given rank can be aggregated to form a more inclusive group of higher rank, thus creating a taxonomic hierarchy. The principal ranks in modern use are domain, kingdom, phylum (''division'' is sometimes used in botany in place of ''phylum''), class, order, family, genus, and species. The Swedish botanist Carl Linnaeus is regarded as the founder of the current system of taxonomy, as he developed a ranked system known as Linnaean taxonomy for categorizing organisms and binomial nomenclature for naming organisms. With advances in the theory, data and analytical technology of biological systematics, the Linnaean system has transformed into a system of modern biological classification intended to reflect the evolu ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus comes above species and below family (taxonomy), family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants ...
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Stenotrophomonas Tumulicola
''Stenotrophomonas'' is a genus of Gram-negative bacteria, comprising at least ten species. The main reservoirs of Stenotrophomonas are soil and plants. ''Stenotrophomonas'' species range from common soil organisms (''S. nitritireducens'') to opportunistic human pathogens ('' S. maltophilia''); the molecular taxonomy of the genus is still somewhat unclear. Importance The most common species, ''S. maltophilia'' is very versatile and can be beneficial for plant growth and health, can be used in agriculture, biocontrol, bioremediation and phytoremediation strategies as well as the production of biomolecules of economic value. On the other hand, some of '' S. maltophilia'' strains are pathogenic to humans with multidrug resistant profile. ''S. indologenes'' can also cause or be part of polymicrobial infections in humans, especially small children. ''Stenotrophomonas'' can also be phytopathogenic unlike closely related genera ''Xylella'' and ''Xanthomonas''. Members of the genus ' ...
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Stenotrophomonas Terrae
''Stenotrophomonas'' is a genus of Gram-negative bacteria, comprising at least ten species. The main reservoirs of Stenotrophomonas are soil and plants. ''Stenotrophomonas'' species range from common soil organisms (''S. nitritireducens'') to opportunistic human pathogens ('' S. maltophilia''); the molecular taxonomy of the genus is still somewhat unclear. Importance The most common species, ''S. maltophilia'' is very versatile and can be beneficial for plant growth and health, can be used in agriculture, biocontrol, bioremediation and phytoremediation strategies as well as the production of biomolecules of economic value. On the other hand, some of '' S. maltophilia'' strains are pathogenic to humans with multidrug resistant profile. ''S. indologenes'' can also cause or be part of polymicrobial infections in humans, especially small children. ''Stenotrophomonas'' can also be phytopathogenic unlike closely related genera ''Xylella'' and ''Xanthomonas''. Members of the genus ' ...
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