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Spirotrich
The spirotrichs are a large and diverse group of ciliate protozoa. They typically have prominent oral cilia in the form of a series of polykinetids, called the adoral zone of membranelles, beginning anterior to the oral cavity and running down to the left side of the mouth. There may also be one or two paroral membranes on its right side. The body cilia are fused to form polykinetids called cirri in some, and are sparse to absent in others. Forms with cirri are common throughout soil, freshwater, and marine environments. Individuals tend to be flattened, with cirri confined to the ventral surface. These are variously used for crawling over objects, acting as feet, swimming, or assisting in food capture. They are generally divided into hypotrichs and stichotrichs, but were originally all considered hypotrichs. Forms with sparse or absent body cilia tend to be smaller and are mostly marine, but a few are common in freshwater. Again, they are generally divided into oligotr ...
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Ciliate
The ciliates are a group of alveolates characterized by the presence of hair-like organelles called cilia, which are identical in structure to eukaryotic flagella, but are in general shorter and present in much larger numbers, with a different undulating pattern than flagella. Cilia occur in all members of the group (although the peculiar Suctoria only have them for part of their life cycle) and are variously used in swimming, crawling, attachment, feeding, and sensation. Ciliates are an important group of protists, common almost anywhere there is water—in lakes, ponds, oceans, rivers, and soils. About 4,500 unique free-living species have been described, and the potential number of extant species is estimated at 27,000–40,000. Included in this number are many ectosymbiotic and endosymbiotic species, as well as some obligate and opportunistic parasites. Ciliate species range in size from as little as 10 µm in some colpodeans to as much as 4 mm in length in s ...
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Ciliate MDS/IES Database
In bioinformatics, the Ciliate MDS/IES database is a biological database of spirotrich genes. See also * Spirotrich The spirotrichs are a large and diverse group of ciliate protozoa. They typically have prominent oral cilia in the form of a series of polykinetids, called the adoral zone of membranelles, beginning anterior to the oral cavity and running down t ... References External links * http://oxytricha.princeton.edu/dimorphism/database.htm. Biological databases Spirotrichea {{Biodatabase-stub ...
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Hypotrichia
The hypotrichs are a group of ciliated protozoa, common in fresh water, salt water, soil and moss. Hypotrichs possess compound ciliary organelles called "cirri," which are made up of thick tufts of cilia, sparsely distributed on the ventral surface of the cell. The multiple fused cilia which form a cirrus function together as a unit, enabling the organism to crawl along solid substrates such as submerged debris or sediments. Hypotrichs typically possess a large oral aperture, bordered on one side by a wreath or collar of membranelles (small membranous structures made up of fused cilia), forming an "adoral zone of membranelles," or AZM. Classification In older systems of classification, the term hypotrich comprised all ciliates possessing a relatively flattened body shape, strong cirri restricted to the ventral surface, and a large oral region (peristome) partially surrounded by an "adoral zone of membranelles". From a phylogenetic point of view, this historic grouping--which ...
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Oligotrich
The oligotrichs are a group of ciliates, included among the spirotrichs. They have prominent oral cilia The cilium, plural cilia (), is a membrane-bound organelle found on most types of eukaryotic cell, and certain microorganisms known as ciliates. Cilia are absent in bacteria and archaea. The cilium has the shape of a slender threadlike projecti ..., which are arranged as a collar and lapel, in contrast to the choreotrichs where they form a complete circle. The body cilia are reduced to a girdle and ventral cilia. In ''Halteria'' and its relatives, they form bristles or cirri; however these forms may be closer relatives of the stichotrichs than of other oligotrichs. These organisms are very common in plankton communities, especially in marine systems. Usually found in concentrations of about 1 per ml, they are the most important herbivores in the sea, the first link in the food chain. File:643 oligotrich-ciliate.jpg, Oligotrich ciliate, probably ''Strombidium'' Fil ...
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Peritrich
The peritrichs (Latin: Peritrichia) are a large and distinctive group of ciliates. The peritrichs were first defined by Friedrich von Stein in 1859. Initially they were considered spirotrichs, then treated as a separate category, before receiving their modern placement. Structure They are usually bell or disc shaped, with a prominent paroral membrane arising from the oral cavity and circling counter-clockwise around the anterior of the cell, accompanied by a smaller series of membranelles. The oral cavity is apical and funnel shaped, with a contractile vacuole discharging directly into it. When disturbed, the anterior of the cell can contract. The rest of the body is unciliated, except for a ''telotroch band'' circling the posterior in mobile species and stages. Order Sessilida The larger order of Peritrichia are the Sessilida. Most of these have modified posterior kinetosomes which secrete a contractile stalk. The unattached stage, called a telotroch, is mouthless. These ...
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Heterotrich
The heterotrichs are a class of ciliates. They typically have a prominent adoral zone of membranelles circling the mouth, used in locomotion and feeding, and shorter cilia on the rest of the body. Many species are highly contractile, and are typically compressed or conical in form. These include some of the largest protozoa, such as '' Stentor'' and '' Spirostomum'', as well as many brightly pigmented forms, such as certain '' Blepharisma''. Etymology The term ''heterotrich'' derives from the ancient Greek (), meaning "another, different", and , (), meaning 'hair', because of the contrast between the regular somatic ciliation and the one of the oral zone. Ultrastructure A number of ultrastructural details characterize the group. The cilia on the body are in dikinetids, in which either the anterior one or both kinetosomes may be ciliated, and which are associated with fibers composed of overlapping postciliary microtubules, called ''postciliodesmata'' and found only in thi ...
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Hypotrich
The hypotrichs are a group of ciliated protozoa, common in fresh water, salt water, soil and moss. Hypotrichs possess compound ciliary organelles called " cirri," which are made up of thick tufts of cilia, sparsely distributed on the ventral surface of the cell. The multiple fused cilia which form a cirrus function together as a unit, enabling the organism to crawl along solid substrates such as submerged debris or sediments. Hypotrichs typically possess a large oral aperture, bordered on one side by a wreath or collar of membranelles (small membranous structures made up of fused cilia), forming an "adoral zone of membranelles," or AZM. Classification In older systems of classification, the term hypotrich comprised all ciliates possessing a relatively flattened body shape, strong cirri restricted to the ventral surface, and a large oral region (peristome) partially surrounded by an "adoral zone of membranelles". From a phylogenetic point of view, this historic grouping-- ...
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Oligotrich
The oligotrichs are a group of ciliates, included among the spirotrichs. They have prominent oral cilia The cilium, plural cilia (), is a membrane-bound organelle found on most types of eukaryotic cell, and certain microorganisms known as ciliates. Cilia are absent in bacteria and archaea. The cilium has the shape of a slender threadlike projecti ..., which are arranged as a collar and lapel, in contrast to the choreotrichs where they form a complete circle. The body cilia are reduced to a girdle and ventral cilia. In ''Halteria'' and its relatives, they form bristles or cirri; however these forms may be closer relatives of the stichotrichs than of other oligotrichs. These organisms are very common in plankton communities, especially in marine systems. Usually found in concentrations of about 1 per ml, they are the most important herbivores in the sea, the first link in the food chain. File:643 oligotrich-ciliate.jpg, Oligotrich ciliate, probably ''Strombidium'' Fil ...
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Tintinnid
Tintinnids are ciliates of the choreotrich order Tintinnida, distinguished by vase-shaped shells, the name deriving from a Latin source meaning a small tinkling bell, that are called'' loricae'', which are mostly protein but may incorporate minute pieces of minerals. Fossil record Fossils resembling tintinnid loricas in shape and size, Calpionellids, appear as early as the Ordovician period but are formed of calcite and as no extant ciliate taxa forms calcite shells they are unlikely to be tintinnids and probably not ciliates at all. Fossils which can be reliably related to extant tintinnids (e.g. fossils of agglutinated lorica) are in the fossil record during the Jurassic but do not become abundant until the Cretaceous. Tintinnids are an important part of the fossil record because of the rarity with which most other ciliates become preserved under the conditions of the marine environment. The loricae of some tintinnids are easily preserved, giving them a relatively good fossil ...
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Paraphyletic
In taxonomy (general), taxonomy, a group is paraphyletic if it consists of the group's most recent common ancestor, last common ancestor and most of its descendants, excluding a few Monophyly, monophyletic subgroups. The group is said to be paraphyletic ''with respect to'' the excluded subgroups. In contrast, a monophyletic group (a clade) includes a common ancestor and ''all'' of its descendants. The terms are commonly used in phylogenetics (a subfield of biology) and in the tree model of historical linguistics. Paraphyletic groups are identified by a combination of Synapomorphy and apomorphy, synapomorphies and symplesiomorphy, symplesiomorphies. If many subgroups are missing from the named group, it is said to be polyparaphyletic. The term was coined by Willi Hennig to apply to well-known taxa like Reptilia (reptiles) which, as commonly named and traditionally defined, is paraphyletic with respect to mammals and birds. Reptilia contains the last common ancestor of reptiles a ...
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Monophyletic
In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic groups are typically characterised by shared derived characteristics ( synapomorphies), which distinguish organisms in the clade from other organisms. An equivalent term is holophyly. The word "mono-phyly" means "one-tribe" in Greek. Monophyly is contrasted with paraphyly and polyphyly as shown in the second diagram. A ''paraphyletic group'' consists of all of the descendants of a common ancestor minus one or more monophyletic groups. A '' polyphyletic group'' is characterized by convergent features or habits of scientific interest (for example, night-active primates, fruit trees, aquatic insects). The features by which a polyphyletic group is differentiated from others are not inherited from a common ancestor. These definitions have t ...
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