Phaeodactylum Tricornutum
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Phaeodactylum Tricornutum
''Phaeodactylum tricornutum'' is a diatom. It is the only species in the genus ''Phaeodactylum''. Unlike other diatoms, ''P. tricornutum'' can exist in different morphotypes (wikt:Special:Search/fusiform, fusiform, triradiate, and oval) and changes in cell shape can be stimulated by environmental conditions. This feature can be used to explore the molecular basis of cell shape control and morphogenesis. Unlike most diatoms, ''P. tricornutum'' can grow in the absence of silicon and can survive without making silicified frustules. This provides opportunities for experimental exploration of silicon-based nanofabrication in diatoms. Another peculiarity is that during asexual reproduction the frustules do not appear to become smaller. This allows continuous culture without need for sexual reproduction. It is not known if ''P. tricornutum'' can reproduce sexually. To date no substantial evidence has been found to support sexual reproduction in a laboratory or other setting. Although ''P ...
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SAR Supergroup
The SAR supergroup, also just SAR or Harosa, is a clade that includes stramenopiles (heterokonts), alveolates, and Rhizaria. The name is an acronym derived from the first letters of each of these clades; it has been alternatively spelled "RAS". The term "Harosa" (at the subkingdom level) has also been used. The SAR supergroup is a node-based taxon. Note that as a formal taxon, "Sar" has only its first letter capitalized, while the earlier abbreviation, SAR, retains all uppercase letters. Both names refer to the same group of organisms, unless further taxonomic revisions deem otherwise. Members of the SAR supergroup were once included under the separate supergroups Chromalveolata (Chromista and Alveolata) and Rhizaria, until phylogenetic studies confirmed that stramenopiles and alveolates diverged with Rhizaria. This apparently excluded haptophytes and cryptomonads, leading Okamoto ''et al.'' (2009) to propose the clade Hacrobia to accommodate them. Phylogeny Based on a compi ...
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Bohlin Figure9 Phaeodactylum
* Adolf Bohlin (born 1873), Swedish missionary * Allan Bohlin (1907–1959), Swedish film actor * Birger Bohlin (1898–1990), Swedish palaeontologist * Britt Bohlin Olsson (born 1956), Swedish social democratic politician * Ella Bohlin (born 1979), Christian Democratic politician in Sweden * Erik Bohlin (1897–1977), Swedish road racing cyclist * Folke Bohlin (sailor) (1903–1972), Swedish sailor * Folke Bohlin (musicologist) (born 1931), Swedish musicologist * Kjell Bohlin (1928–2011), Norwegian politician * Nils Bohlin (1920–2002), Swedish inventor * Peter Bohlin (born 1937), American architect * Ragnar Bohlin (born 1965), Swedish conductor * Ross Bohlin, former Australian politician * Sinikka Bohlin (born 1947), Swedish social democratic politician * Yoie Bohlin (born 1990), Swedish sportswoman See also * Bohlin Cywinski Jackson, United States -based architectural practice * Bolin Bolin is a surname. Notable people with the surname include: * Bert Bolin (1925–200 ...
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Genomics
Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dimensional structural configuration. In contrast to genetics, which refers to the study of ''individual'' genes and their roles in inheritance, genomics aims at the collective characterization and quantification of ''all'' of an organism's genes, their interrelations and influence on the organism. Genes may direct the production of proteins with the assistance of enzymes and messenger molecules. In turn, proteins make up body structures such as organs and tissues as well as control chemical reactions and carry signals between cells. Genomics also involves the sequencing and analysis of genomes through uses of high throughput DNA sequencing and bioinformatics to assemble and analyze the function and structure of entire genomes. Advances in ...
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Algaculture
Algaculture is a form of aquaculture involving the farming of species of algae. The majority of algae that are intentionally cultivated fall into the category of microalgae (also referred to as phytoplankton, microphytes, or planktonic algae). Macroalgae, commonly known as seaweed, also have many commercial and industrial uses, but due to their size and the specific requirements of the environment in which they need to grow, they do not lend themselves as readily to cultivation (this may change, however, with the advent of newer seaweed cultivators, which are basically algae scrubbers using upflowing air bubbles in small containers). Commercial and industrial algae cultivation has numerous uses, including production of nutraceuticals such as omega-3 fatty acids (as algal oil) or natural food colorants and dyes, food, fertilizers, bioplastics, chemical feedstock (raw material), protein-rich animal/aquaculture feed, pharmaceuticals, and algal fuel, and can also be used as a means ...
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Diatom EST Database
A diatom (New Latin, Neo-Latin ''diatoma''), "a cutting through, a severance", from el, διάτομος, diátomos, "cut in half, divided equally" from el, διατέμνω, diatémno, "to cut in twain". is any member of a large group comprising several Genus, genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of the Earth's Biomass (ecology), biomass: they generate about 20 to 50 percent of the oxygen produced on the planet each year, take in over 6.7 billion metric tons of silicon each year from the waters in which they live, and constitute nearly half of the organic material found in the oceans. The Protist shell, shells of dead diatoms can reach as much as a half-mile (800 m) deep on the ocean floor, and the entire Amazon basin is fertilized annually by 27 million tons of diatom shell dust transported by transatlantic winds from the African Sahara, much of it from the Bodélé Dep ...
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Fragilariopsis Cylindrus
''Fragilariopsis cylindrus'' is a Pennales, pennate sea-ice diatom that is found native in the Argentine Sea and Antarctic waters, with a pH of 8.1-8.4. It is regarded as an Bioindicator, indicator species for polar water. Description ''Fragilariopsis cylindrus'' is a Unicellular organism, unicellular, Eukaryote, eukaryotic, microalgae that is important due to its ecological roles. This is because it is major contributor to climate change processes, responsible for 20% global carbon fixation, and forms a substantial basis of the Marine life, marine food web, making up 40% of marine primary productivity. ''F. cylindrus'' is found native to the Southern Ocean, with their proximal side valve mantle being 1.6 μm, their girdle 0.75μm, apical axis ranging between 15.5μm to 55.0μm, transapical axis ranging from 2.4μm to 4.0μm, and their transapcial axis ranging from 2.4μm to 4.μm. Their transapical striae count is 10-16, with a mean of 10μm, while their row of poroids range ...
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Thalassiosira Pseudonana
''Thalassiosira pseudonana'' is a species of marine centric diatoms. It was chosen as the first eukaryotic marine phytoplankton for whole genome sequencing. ''T. pseudonana'' was selected for this study because it is a model for diatom physiology studies, belongs to a genus widely distributed throughout the world's oceans, and has a relatively small genome at 34 mega base pairs. Scientists are researching on diatom light absorption, using the marine diatom of Thalassiosira. The diatom requires a high enough concentration of CO2 in order to utilize C4 metabolism (Clement ''et al.'' 2015). The clone of ''T. pseudonana'' that was sequenced is CCMP 1335 and is available from the National Center for Marine Algae and Microbiota at Bigelow Laboratory for Ocean Sciences. This clone was originally collected in 1958 from Moriches Bay (Long Island, New York) and has been maintained continuously in culture. Symbiosis ''Thalassiosira pseudonana'' and the heterotrophic alphaproteobacterium ...
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Genome
In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of 'junk' DNA with no evident function. Almost all eukaryotes have mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The International Human Genome Project reported the sequence of the genome for ''Homo sapiens'' in 200The Human Genome Project although the initial "finished" sequence was missing 8% of the genome consisting mostly of repetitive sequences. With advancements in technology that could handle sequenci ...
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Pennate Diatom
The order Pennales is a traditional subdivision of the heterokont algae known as diatoms. The order is named for the shape of the cell walls (or valves or frustules) of pennate diatoms, which are elongated in valve view. The valves may be linear or oval in shape, and usually bear bilaterally symmetrical ornamental patterns. These patterns are composed of a series of transverse lines (known as striae) that can appear as rows of dots when viewed with an optical microscope. Some pennate diatoms also exhibit a fissure along their longitudinal axis. This is known as a raphe, and is involved in gliding movements made by diatom cells; motile diatoms always possess a raphe. In terms of cell cycle, vegetative cells are diploid and undergo mitosis during normal cell division. Periodically, meiosis produces morphologically identical haploid gametes (isogametes), which fuse to produce a (sometimes binucleate) zygote that develops into an auxospore (from which full-sized vegetative cell ...
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Heterokonta
Heterokonts are a group of protists (formally referred to as Heterokonta, Heterokontae or Heterokontophyta). The group is a major line of eukaryotes. Most are algae, ranging from the giant multicellular kelp to the unicellular diatoms, which are a primary component of plankton. Other notable members of the Stramenopiles include the (generally) parasitic oomycetes, including ''Phytophthora'', which caused the Great Famine of Ireland, and ''Pythium'', which causes seed rot and damping off. The name "heterokont" refers to the type of motile life cycle stage, in which the flagellated cells possess two differently arranged flagella (see zoospore). History In 1899, Alexander Luther created the term "Heterokontae" for some algae with unequal flagella, today called Xanthophyceae. Later, some authors (e.g., Copeland, 1956) included other groups in Heterokonta, expanding the name's sense. The term continues to be applied in different ways, leading to Heterokontophyta being applied al ...
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Frustule
A frustule is the hard and porous cell wall or external layer of diatoms. The frustule is composed almost purely of silica, made from silicic acid, and is coated with a layer of organic substance, which was referred to in the early literature on diatoms as pectin, a fiber most commonly found in cell walls of plants. This layer is actually composed of several types of polysaccharides.Progress in Phycological Research: v. 7 (1991) by F.E. Round (Volume editor), David J. Chapman (Volume editor) The frustule's structure is usually composed of two overlapping sections known as thecae (or less formally as valves). The joint between the two thecae is supported by bands of silica (girdle bands) that hold them together. This overlapping allows for some internal expansion room and is essential during the reproduction process. The frustule also contains many pores called areolae and slits that provide the diatom access to the external environment for processes such as waste removal and muci ...
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