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Paraburkholderia Nodosa
''Paraburkholderia nodosa'' is a gram-negative, catalase and oxidase-positive, non-spore-forming, bacterium from the genus '' Paraburkholderia'' and the family Burkholderiaceae which was isolated from nitrogen-fixing nodules from roots of ''Mimosa bimucronata'' and ''Mimosa scabrella ''Mimosa scabrella'' is a tree in the family Fabaceae. It is very fast-growing and it can reach a height of tall in only 3 years. Its trunk is about in diameter. It has yellow flowers. Biology ''Mimosa scabrella'' (Bracatinga) is a tree in ...''. References nodosa Bacteria described in 2007 {{Betaproteobacteria-stub ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Catalase
Catalase is a common enzyme found in nearly all living organisms exposed to oxygen (such as bacteria, plants, and animals) which catalyzes the decomposition of hydrogen peroxide to water and oxygen. It is a very important enzyme in protecting the cell from oxidative damage by reactive oxygen species (ROS). Catalase has one of the highest turnover numbers of all enzymes; one catalase molecule can convert millions of hydrogen peroxide molecules to water and oxygen each second. Catalase is a tetramer of four polypeptide chains, each over 500 amino acids long. It contains four iron-containing heme groups that allow the enzyme to react with hydrogen peroxide. The optimum pH for human catalase is approximately 7, and has a fairly broad maximum: the rate of reaction does not change appreciably between pH 6.8 and 7.5. The pH optimum for other catalases varies between 4 and 11 depending on the species. The optimum temperature also varies by species. Structure Human catalase forms a t ...
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Oxidase
In biochemistry, an oxidase is an enzyme that catalyzes oxidation-reduction reactions, especially one involving dioxygen (O2) as the electron acceptor. In reactions involving donation of a hydrogen atom, oxygen is reduced to water (H2O) or hydrogen peroxide (H2O2). Some oxidation reactions, such as those involving monoamine oxidase or xanthine oxidase, typically do not involve free molecular oxygen. The oxidases are a subclass of the oxidoreductases. Examples An important example is cytochrome c oxidase, the key enzyme that allows the body to employ oxygen in the generation of energy and the final component of the electron transfer chain. Other examples are: * Glucose oxidase * Monoamine oxidase * Cytochrome P450 oxidase * NADPH oxidase * Xanthine oxidase * L-gulonolactone oxidase * Laccase * Lysyl oxidase * Polyphenol oxidase * Sulfhydryl oxidase. This enzyme oxidises thiol groups. Oxidase test In microbiology, the oxidase test is used as a phenotypic characteristic for t ...
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Spore
In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, fungi and protozoa. Bacterial spores are not part of a sexual cycle, but are resistant structures used for survival under unfavourable conditions. Myxozoan spores release amoeboid infectious germs ("amoebulae") into their hosts for parasitic infection, but also reproduce within the hosts through the pairing of two nuclei within the plasmodium, which develops from the amoebula. In plants, spores are usually haploid and unicellular and are produced by meiosis in the sporangium of a diploid sporophyte. Under favourable conditions the spore can develop into a new organism using mitotic division, producing a multicellular gametophyte, which eventually goes on to produce gametes. Two gametes fuse to form a zygote which develops into a new s ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationshi ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus comes above species and below family (taxonomy), family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants ...
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Paraburkholderia
''Paraburkholderia'' is a genus of Pseudomonadota that are gram negative, slightly curved rods that are motile by means of flagella. They have been reported to colonize endophytic tissues of hybrid spruce (Picea glauca x engelmannii) and lodgepole pine with a strong potential to perform biological nitrogen fixation and plant growth promotion. Unlike ''Burkholderia'' species, ''Paraburkholderia'' members are not commonly associated with human infection. ''Paraburkholderia'' members form a monophyletic clade within the Burkholderiaceae family, which is what prompted their distinction as a genus independent from ''Burkholderia'' species, in combination with the finding of robust conserved signature indels which are unique to ''Paraburkholderia'' species, and are lacking in members of the genus ''Burkholderia''. These CSIs distinguish the genus from all other bacteria. Additionally, the CSIs that were found to be shared by ''Burkholderia'' species are absent in ''Paraburkholderia'' ...
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Burkholderiaceae
The Burkholderiaceae are a family of bacteria included in the order Burkholderiales.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . It includes some pathogenic species, such as ''Burkholderia mallei'' (glanders) and ''Burkholderia pseudomallei'' (melioidosis Melioidosis is an infectious disease caused by a gram-negative bacterium called ''Burkholderia pseudomallei''. Most people exposed to ''B. pseudomallei'' experience no symptoms; however, those who do experience symptoms have signs and symptoms t ...). References External links J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature Burkholderiales Bacteria families {{betaproteobacteria-stub ...
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Nitrogen-fixing
Nitrogen fixation is a chemical process by which molecular nitrogen (), with a strong triple covalent bond, in the air is converted into ammonia () or related nitrogenous compounds, typically in soil or aquatic systems but also in industry. Atmospheric nitrogen is molecular dinitrogen, a relatively nonreactive molecule that is metabolically useless to all but a few microorganisms. Biological nitrogen fixation or ''diazotrophy'' is an important microbials mediated process that converts dinitrogen (N2) gas to ammonia (NH3) using the nitrogenase protein complex (Nif). Nitrogen fixation is essential to life because fixed inorganic nitrogen compounds are required for the biosynthesis of all nitrogen-containing organic compounds, such as amino acids and proteins, nucleoside triphosphates and nucleic acids. As part of the nitrogen cycle, it is essential for agriculture and the manufacture of fertilizer. It is also, indirectly, relevant to the manufacture of all nitrogen chemical compo ...
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Root Nodule
Root nodules are found on the roots of plants, primarily legumes, that form a symbiosis with nitrogen-fixing bacteria. Under nitrogen-limiting conditions, capable plants form a symbiotic relationship with a host-specific strain of bacteria known as rhizobia. This process has evolved multiple times within the legumes, as well as in other species found within the Rosid clade. Legume crops include beans, peas, and soybeans. Within legume root nodules, nitrogen gas (N2) from the atmosphere is converted into ammonia (NH3), which is then assimilated into amino acids (the building blocks of proteins), nucleotides (the building blocks of DNA and RNA as well as the important energy molecule ATP), and other cellular constituents such as vitamins, flavones, and hormones. Their ability to fix gaseous nitrogen makes legumes an ideal agricultural organism as their requirement for nitrogen fertilizer is reduced. Indeed, high nitrogen content blocks nodule development as there is no benefit ...
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Mimosa Bimucronata
''Mimosa'' is a genus of about 590 species of herbs and shrubs, in the mimosoid clade of the legume family Fabaceae. The generic name is derived from the Greek word (''mimos''), an "actor" or "mime", and the feminine suffix -''osa'', "resembling", suggesting its 'sensitive leaves' which seem to 'mimic conscious life'. Two species in the genus are especially notable. One is '' Mimosa pudica'', commonly known as touch-me-not, which folds its leaves when touched or exposed to heat. It is native to southern Central and South America but is widely cultivated elsewhere for its curiosity value, both as a houseplant in temperate areas, and outdoors in the tropics. Outdoor cultivation has led to weedy invasion in some areas, notably Hawaii. The other is '' Mimosa tenuiflora'', which is best known for its use in shamanic ayahuasca brews due to the psychedelic drug dimethyltryptamine found in its root bark. Taxonomy The taxonomy of the genus ''Mimosa'' has gone through several perio ...
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Mimosa Scabrella
''Mimosa scabrella'' is a tree in the family Fabaceae. It is very fast-growing and it can reach a height of tall in only 3 years. Its trunk is about in diameter. It has yellow flowers. Biology ''Mimosa scabrella'' (Bracatinga) is a tree in the subfamily Mimosoideae of the family Fabaceae. It is a cross-pollinating, mostly tetraploid plant with 52 chromosomes. ''Mimosa scabrella'' is native to the southern region of Brazil. There it grows naturally in associations called “Bracatingais”. The Cerrado zone is a centre of biodiversity of ''Mimosa'', where about one quarter of all ''Mimosa'' species are found. However ''M. scabrella'' evolved to grow in colder humid weather south from this region, in a sub-type of Atlantic Forest, called "mixed ombrophilous forest" (also known as Araucaria moist forests). It is one of the fastest growing trees in the world. Within 14 months ''Mimosa scabrella'' grows up to , in 2 years it reaches , and in 3 years it can grow to a height of .O ...
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