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Old World Babbler
The Old World babblers or Timaliidae are a family of mostly Old World passerine birds. They are rather diverse in size and coloration, but are characterised by soft fluffy plumage. These are birds of tropical areas, with the greatest variety in Southeast Asia and the Indian subcontinent. The timaliids are one of two unrelated groups of birds known as babblers, the other being the Australasian babblers of the family Pomatostomidae (also known as pseudo-babblers). Morphological diversity is rather high; most species resemble "warblers", jays or thrushes. This group is among those Old World bird families with the highest number of species still being discovered. Characteristics Timaliids are small to medium birds. They have strong legs, and many are quite terrestrial. They typically have generalised bills, similar to those of a thrush or warbler, except for the scimitar babblers which, as their name implies, have strongly decurved bills. Most have predominantly brown plumage, ...
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Pin-striped Tit-babbler
The pin-striped tit-babbler (''Mixornis gularis''), also known as the yellow-breasted babbler, is a species of bird in the Old World babbler family Timaliidae that is found in South Asia, South and Southeast Asia. Taxonomy and systematics The pin-striped tit-babbler was species description, formally described in 1822 by the American naturalist Thomas Horsfield based on a specimen collected in Sumatra. He coined the binomial name ''Timalia gularis''. The pin-striped tit-babbler was formerly placed in the genus ''Macronus'' but based on the results of a large molecular phylogenetic study published in 2019, the species was moved to the genus ''Mixornis'' that had been introduced in 1842 by the English zoologist Edward Blyth. The genus name combines the Ancient Greek ''mixis'' meaning "mixed" or "mingling" with ''ornis'' meaning "bird". The specific epithet ''gularis'' is Modern Latin meaning "-throated". The pin-striped tit-babbler belongs within a clade that includes the genera ''Du ...
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Insectivore
A robber fly eating a hoverfly An insectivore is a carnivorous animal or plant that eats insects. An alternative term is entomophage, which can also refer to the human practice of eating insects. The first vertebrate insectivores were amphibians. When they evolved 400 million years ago, the first amphibians were piscivores, with numerous sharp conical teeth, much like a modern crocodile. The same tooth arrangement is however also suited for eating animals with exoskeletons, thus the ability to eat insects is an extension of piscivory. At one time, insectivorous mammals were scientifically classified in an order called Insectivora. This order is now abandoned, as not all insectivorous mammals are closely related. Most of the Insectivora taxa have been reclassified; those that have not yet been reclassified and found to be truly related to each other remain in the order Eulipotyphla. Although individually small, insects exist in enormous numbers. Insects make u ...
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Polytomy
An internal node of a phylogenetic tree is described as a polytomy or multifurcation if (i) it is in a rooted tree and is linked to three or more child subtrees or (ii) it is in an unrooted tree and is attached to four or more branches. A tree that contains any multifurcations can be described as a multifurcating tree. Soft polytomies vs. hard polytomies Two types of polytomies are recognised, soft and hard polytomies. Soft polytomies are the result of insufficient phylogenetic information: though the lineages diverged at different times – meaning that some of these lineages are closer relatives than others, and the available data does not allow recognition of this. Most polytomies are soft, meaning that they would be resolved into a typical tree of dichotomies if better data were available. In contrast, a hard polytomy represents a true divergence event of three or more lineages. Applications Interpretations for a polytomy depend on the individuals, that are represe ...
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MT-RNR2
Mitochondrially encoded 16S RNA (often abbreviated as ''16S'') is the mitochondrial large subunit ribosomal RNA that in humans is encoded by the MT-RNR2 gene. The MT-RNR2 gene also encodes the Humanin polypeptide that has been the target of Alzheimer's disease research. The 16S rRNA is the mitochondrial homologue of the prokaryotic 23S and eukaryotic nuclear 28S ribosomal RNAs. See also * Mitochondrial DNA Mitochondrial DNA (mtDNA or mDNA) is the DNA located in mitochondria, cellular organelles within eukaryotic cells that convert chemical energy from food into a form that cells can use, such as adenosine triphosphate (ATP). Mitochondrial D ... * Humanin References Ribosomal RNA Human mitochondrial genes {{genetics-stub ...
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12S RRNA
Mitochondrially encoded 12S ribosomal RNA (often abbreviated as 12S or 12S rRNA), also known as Mitochondrial-derived peptide MOTS-c or Mitochondrial open reading frame of the 12S rRNA-c is the SSU rRNA of the mitochondrial ribosome. In humans, 12S is encoded by the ''MT-RNR1'' gene and is 959 nucleotides long. MT-RNR1 is one of the 37 genes contained in animal mitochondria genomes. Their 2 rRNA, 22 tRNA and 13 mRNA genes are very useful in phylogenetic studies, in particular the 12S and 16S rRNAs. The 12S rRNA is the mitochondrial homologue of the prokaryotic 16S and eukaryotic nuclear 18S ribosomal RNAs. Mutations in the MT-RNR1 gene may be associated with hearing loss. Structure The ''MT-RNR1'' gene is located on the p arm of the mitochondrial DNA at position 12 and it spans 953 base pairs. Function The ''MT-RNR1'' gene encodes for a protein responsible for regulating insulin sensitivity and metabolic homeostasis. The protein acts as an inhibitor of the folate cycl ...
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Cytochrome B
Cytochrome b within both molecular and cell biology, is a protein found in the mitochondria of eukaryotic cells. It functions as part of the electron transport chain and is the main subunit of transmembrane cytochrome bc1 and b6f complexes. Function In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III () — also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is an analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (), also known as the b6f complex. These complexes are involved in electron transport, the pumping of protons to create a proton-motive force ( PMF). This proton gradient is used for the generation of ATP. These complexes play a vital role in cells. Structure Cytochrome b/b6 is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. ...
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MtDNA
Mitochondrial DNA (mtDNA or mDNA) is the DNA located in mitochondria, cellular organelles within eukaryotic cells that convert chemical energy from food into a form that cells can use, such as adenosine triphosphate (ATP). Mitochondrial DNA is only a small portion of the DNA in a eukaryotic cell; most of the DNA can be found in the cell nucleus and, in plants and algae, also in plastids such as chloroplasts. Human mitochondrial DNA was the first significant part of the human genome to be sequenced. This sequencing revealed that the human mtDNA includes 16,569 base pairs and encodes 13 proteins. Since animal mtDNA evolves faster than nuclear genetic markers, it represents a mainstay of phylogenetics and evolutionary biology. It also permits an examination of the relatedness of populations, and so has become important in anthropology and biogeography. Origin Nuclear and mitochondrial DNA are thought to be of separate evolutionary origin, with the mtDNA being derived from t ...
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Monophyletic
In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic groups are typically characterised by shared derived characteristics ( synapomorphies), which distinguish organisms in the clade from other organisms. An equivalent term is holophyly. The word "mono-phyly" means "one-tribe" in Greek. Monophyly is contrasted with paraphyly and polyphyly as shown in the second diagram. A ''paraphyletic group'' consists of all of the descendants of a common ancestor minus one or more monophyletic groups. A '' polyphyletic group'' is characterized by convergent features or habits of scientific interest (for example, night-active primates, fruit trees, aquatic insects). The features by which a polyphyletic group is differentiated from others are not inherited from a common ancestor. These definitions have ta ...
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DNA Sequence
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid speed of sequencing attained with modern D ...
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Taxa
In biology, a taxon (back-formation from ''taxonomy''; plural taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and given a particular ranking, especially if and when it is accepted or becomes established. It is very common, however, for taxonomists to remain at odds over what belongs to a taxon and the criteria used for inclusion. If a taxon is given a formal scientific name, its use is then governed by one of the nomenclature codes specifying which scientific name is correct for a particular grouping. Initial attempts at classifying and ordering organisms (plants and animals) were set forth in Carl Linnaeus's system in ''Systema Naturae'', 10th edition (1758), as well as an unpublished work by Bernard and Antoine Laurent de Jussieu. The idea of a unit-based system of biological classification was first made widely available in 1805 in the intr ...
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Ernst Hartert
Ernst Johann Otto Hartert (29 October 1859 – 11 November 1933) was a widely published German ornithologist. Life and career Hartert was born in Hamburg, Germany on 29 October 1859. In July 1891, he married the illustrator Claudia Bernadine Elisabeth Hartert in Frankfurt am Main, Germany, with whom he had a son named Joachim Karl (Charles) Hartert, (1893–1916), who was killed as an English soldier on the Somme. Together with his wife, he was the first to describe the blue-tailed Buffon hummingbird subspecies (''Chalybura buffonii intermedia'' Hartert, E & Hartert, C, 1894). The article ''On a collection of Humming Birds from Ecuador and Mexico'' appears to be their only joint publication. Hartert was employed by Walter Rothschild, 2nd Baron Rothschild as ornithological curator of Rothshild's private Natural History Museum at Tring, in England from 1892 to 1929. Hartert published the quarterly museum periodical ''Novitates Zoologicae'' (1894–39) with Rothschild, and the ...
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Wrentit
The wrentit (''Chamaea fasciata'') is a small bird that lives in chaparral, oak woodlands, and bushland on the western coast of North America. It is the only species in the genus ''Chamaea''. Its systematics have been the subject of much debate, the wrentit having been placed in many different families by different authors for as long as it has been known to science. Its common name reflects the uncertainty, and its external resemblance to both tits and wrens. It is by no means closely related to either, however, and more recent and comprehensive phylogenetic studies support it belonging to the parrotbills. Description The wrentit is a small, bird with uniform dull olive, brown, or grayish plumage. It has short wings and a long tail often held high (hence the comparison to wrens). It has a short bill and a pale iris. Given its retiring nature and loud voice, the wrentit is more likely to be detected by its call than by sight. The distinct sound that it makes is similar ...
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