OpenChrom
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OpenChrom
OpenChrom is an open source software for the analysis and visualization of mass spectrometric and chromatographic data. Its focus is to handle native data files from several mass spectrometry systems (e.g. GC/MS, LC/MS, Py-GC/MS, HPLC-MS), vendors like Agilent Technologies, Varian, Shimadzu, Thermo Fisher, PerkinElmer and others. But also data formats from other detector types are supported recently. OpenChrom supports only the analysis and representation of chromatographic and mass spectrometric data. It has no capabilities for data acquisition or control of vendor hardware. OpenChrom is built on the Eclipse Rich Client Platform (RCP), hence it is available for various operating systems, e.g. Microsoft Windows, macOS and Linux. It is distributed under the Eclipse Public License 1.0 (EPL). Third-party libraries are separated into single bundles and are released under various OSI compatible licenses. History OpenChrom was developed by Philip Wenig ( SCJP, LPIC-1) as part of ...
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Mass Spectrometry Data Format
Mass spectrometry is a scientific technique for measuring the mass-to-charge ratio of ions. It is often coupled to chromatographic techniques such as gas- or liquid chromatography and has found widespread adoption in the fields of analytical chemistry and biochemistry where it can be used to identify and characterize small molecules and proteins ( proteomics). The large volume of data produced in a typical mass spectrometry experiment requires that computers be used for data storage and processing. Over the years, different manufacturers of mass spectrometers have developed various proprietary data formats for handling such data which makes it difficult for academic scientists to directly manipulate their data. To address this limitation, several open, XML-based data formats have recently been developed by the Trans-Proteomic Pipeline at the Institute for Systems Biology to facilitate data manipulation and innovation in the public sector. These data formats are described here. Op ...
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Thermo Fisher
Thermo Fisher Scientific Inc. is an American supplier of scientific instrumentation, reagents and consumables, and software services. Based in Waltham, Massachusetts, Thermo Fisher was formed through the merger of Thermo Electron and Fisher Scientific in 2006. Thermo Fisher Scientific has acquired other reagent, consumable, instrumentation, and service providers, including: Life Technologies Corporation (2013), Alfa Aesar (2015), Affymetrix (2016), FEI Company (2016), BD Advanced Bioprocessing (2018), and PPD (2021). As of 2017, the company had a market capitalization of $21 billion and was a Fortune 500 company. Annual revenue in 2021 was US$39.21 billion. In March 2020, Thermo Fisher Scientific received emergency use authorization from the FDA for a test for SARS-CoV-2 to help mitigate the COVID-19 pandemic. History Predecessors and merger Thermo Electron was co-founded in 1956 by George N. Hatsopoulos and Peter M Nomikos. Hatsopoulos received a PhD from MIT in ...
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Proprietary Format
A proprietary file format is a file format of a company, organization, or individual that contains data that is ordered and stored according to a particular encoding-scheme, designed by the company or organization to be secret, such that the decoding and interpretation of this stored data is easily accomplished only with particular software or hardware that the company itself has developed. The specification of the data encoding format is not released, or underlies non-disclosure agreements. A proprietary format can also be a file format whose encoding is in fact published, but is restricted through licences such that only the company itself or licensees may use it. In contrast, an open format is a file format that is published and free to be used by everybody. Proprietary formats are typically controlled by a company or organization for its own benefits, and the restriction of its use by others is ensured through patents or as trade secrets. It is thus intended to give the licence ...
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Free/Libre/Open-Source Software
Free and open-source software (FOSS) is a term used to refer to groups of software consisting of both free software and open-source software where anyone is freely licensed to use, copy, study, and change the software in any way, and the source code is openly shared so that people are encouraged to voluntarily improve the design of the software. This is in contrast to proprietary software, where the software is under restrictive copyright licensing and the source code is usually hidden from the users. FOSS maintains the software user's civil liberty rights (see the Four Essential Freedoms, below). Other benefits of using FOSS can include decreased software costs, increased security and stability (especially in regard to malware), protecting privacy, education, and giving users more control over their own hardware. Free and open-source operating systems such as Linux and descendants of BSD are widely utilized today, powering millions of servers, desktops, smartphones (e.g., A ...
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Eclipse Foundation
The Eclipse Foundation AISBL is an independent, Europe-based not-for-profit corporation that acts as a steward of the Eclipse open source software development community, with legal jurisdiction in the European Union. It is an organization supported by over 350 members, and represents the world's largest sponsored collection of Open Source projects and developers. The Foundation focuses on key services such as intellectual property (IP) management, ecosystem development, and IT infrastructure. Projects The Eclipse Project was originally created by IBM in November 2001 and was supported by a consortium of software vendors. In 2004, the Eclipse Foundation was founded to lead and develop the Eclipse community. It was created to allow a vendor-neutral, open, and transparent community to be established around Eclipse. The Foundation utilizes a hierarchical project structure. Each project stems from a primary parent project and may have sub-projects. The uppermost projects, which d ...
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Chemometrics And Intelligent Laboratory Systems
''Chemometrics and Intelligent Laboratory Systems'' is a peer-reviewed scientific journal sponsored by the Chemometrics Society and published since 1986 by Elsevier. The current editor-in-chief is R. Tauler (Barcelona, Spain). Abstracting and indexing The journal is abstracted and indexed in Analytical Abstracts, Cambridge Scientific Abstracts, Chemical Abstracts, Current Contents, Current Index to Statistics, EMBASE, Inspec, PubMed, Science Citation Index, and Scopus. According to the ''Journal Citation Reports'', the journal's 2020 impact factor The impact factor (IF) or journal impact factor (JIF) of an academic journal is a scientometric index calculated by Clarivate that reflects the yearly mean number of citations of articles published in the last two years in a given journal, as i ... is 3.491. In 2016 the journal's ranking was 15th out of 58 journals in the category "Automation & Control Systems", 29th out of 74 in the category "Chemistry, Analytical", 26th out of ...
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