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Ocean Optics
:''This article refers to the general field of ocean optics, including ocean color. For specific uses of ocean optics in satellite remote sensing, see Ocean color.'' Ocean optics is the study of how light interacts with water and the materials in water. Although research often focuses on the sea, the field broadly includes rivers, lakes, inland waters, coastal waters, and large ocean basins. How light acts in water is critical to how ecosystems function underwater. Knowledge of ocean optics is needed in aquatic remote sensing research in order to understand what information can be extracted from the color of the water as it appears from satellite sensors in space. The color of the water as seen by satellites is known as ocean color. While ocean color is a key theme of ocean optics, optics is a broader term that also includes the development of underwater sensors using optical methods to study much more than just color, including ocean chemistry, particle size, imaging of microscop ...
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Ocean Color
Ocean color is the branch of ocean optics that specifically studies the color of the water and information that can be gained from looking at variations in color. The color of the ocean, while mainly blue, actually varies from blue to green or even yellow, brown or red in some cases. This field of study developed alongside water remote sensing, so it is focused mainly on how color is measured by instruments (like the sensors on satellites and airplanes). Most of the ocean is blue in color, but in some places the ocean is blue-green, green, or even yellow to brown. Blue ocean color is a result of several factors. First, water preferentially absorbs red light, which means that blue light remains and is reflected back out of the water. Red light is most easily absorbed and thus does not reach great depths, usually to less than 50 meters (164 ft.). Blue light, in comparison, can penetrate up to 200 meters (656 ft.). Second, water molecules and very tiny particles in ocean w ...
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Attenuation (electromagnetic Radiation)
In physics, attenuation (in some contexts, extinction) is the gradual loss of flux intensity through a medium. For instance, dark glasses attenuate sunlight, lead attenuates X-rays, and water and air attenuate both light and sound at variable attenuation rates. Hearing protectors help reduce acoustic flux from flowing into the ears. This phenomenon is called acoustic attenuation and is measured in decibels (dBs). In electrical engineering and telecommunications, attenuation affects the propagation of waves and signals in electrical circuits, in optical fibers, and in air. Electrical attenuators and optical attenuators are commonly manufactured components in this field. Background In many cases, attenuation is an exponential function of the path length through the medium. In optics and in chemical spectroscopy, this is known as the Beer–Lambert law. In engineering, attenuation is usually measured in units of decibels per unit length of medium (dB/cm, dB/km, etc.) and is ...
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Biological Pump
The biological pump (or ocean carbon biological pump or marine biological carbon pump) is the ocean's biologically driven sequestration of carbon from the atmosphere and land runoff to the ocean interior and seafloor sediments.Sigman DM & GH Haug. 2006. The biological pump in the past. In: Treatise on Geochemistry; vol. 6, (ed.). Pergamon Press, pp. 491-528 In other words, it is a biologically mediated processes which result in the sequestering of carbon in the deep ocean away from the atmosphere and the land. The biological pump is the biological component of the "marine carbon pump" which contains both a physical and biological component. It is the part of the broader oceanic carbon cycle responsible for the cycling of organic matter formed mainly by phytoplankton during photosynthesis (soft-tissue pump), as well as the cycling of calcium carbonate (CaCO3) formed into shells by certain organisms such as plankton and mollusks (carbonate pump). Budget calculations of the biol ...
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Marine Biogeochemical Cycles
Marine biogeochemical cycles are biogeochemical cycles that occur within marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. These biogeochemical cycles are the pathways chemical substances and elements move through within the marine environment. In addition, substances and elements can be imported into or exported from the marine environment. These imports and exports can occur as exchanges with the atmosphere above, the ocean floor below, or as runoff from the land. There are biogeochemical cycles for the elements calcium, carbon, hydrogen, mercury, nitrogen, oxygen, phosphorus, selenium, and sulfur; molecular cycles for water and silica; macroscopic cycles such as the rock cycle; as well as human-induced cycles for synthetic compounds such as polychlorinated biphenyl (PCB). In some cycles there are reservoirs where a substance can be stored for a long time. The cycling of these elements is interconnected. Marine orga ...
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Coral Reef
A coral reef is an underwater ecosystem characterized by reef-building corals. Reefs are formed of colonies of coral polyps held together by calcium carbonate. Most coral reefs are built from stony corals, whose polyps cluster in groups. Coral belongs to the class Anthozoa in the animal phylum Cnidaria, which includes sea anemones and jellyfish. Unlike sea anemones, corals secrete hard carbonate exoskeletons that support and protect the coral. Most reefs grow best in warm, shallow, clear, sunny and agitated water. Coral reefs first appeared 485 million years ago, at the dawn of the Early Ordovician, displacing the microbial and sponge reefs of the Cambrian. Sometimes called ''rainforests of the sea'', shallow coral reefs form some of Earth's most diverse ecosystems. They occupy less than 0.1% of the world's ocean area, about half the area of France, yet they provide a home for at least 25% of all marine species, including fish, mollusks, worms, crustaceans, echinoderms, sp ...
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Seagrass Meadow
A seagrass meadow or seagrass bed is an underwater ecosystem formed by seagrasses. Seagrasses are marine (saltwater) plants found in shallow coastal waters and in the brackish waters of estuaries. Seagrasses are flowering plants with stems and long green, grass-like leaves. They produce seeds and pollen and have roots and rhizomes which anchor them in seafloor sand. Seagrasses form dense underwater meadows which are among the most productive ecosystems in the world. They provide habitats and food for a diversity of marine life comparable to that of coral reefs. This includes invertebrates like shrimp and crabs, cod and flatfish, marine mammals and birds. They provide refuges for endangered species such as seahorses, turtles, and dugongs. They function as nursery habitats for shrimps, scallops and many commercial fish species. Seagrass meadows provide coastal storm protection by the way their leaves absorb energy from waves as they hit the coast. They keep coastal waters healthy ...
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Zooplankton
Zooplankton are the animal component of the planktonic community ("zoo" comes from the Greek word for ''animal''). Plankton are aquatic organisms that are unable to swim effectively against currents, and consequently drift or are carried along by currents in the ocean, or by currents in seas, lakes or rivers. Zooplankton can be contrasted with phytoplankton, which are the plant component of the plankton community ("phyto" comes from the Greek word for ''plant''). Zooplankton are heterotrophic (other-feeding), whereas phytoplankton are autotrophic (self-feeding). This means zooplankton cannot manufacture their own food but must eat other plants or animals instead — in particular they eat phytoplankton. Zooplankton are generally larger than phytoplankton, most are microscopic, but some (such as jellyfish) are macroscopic and can be seen with the naked eye. Many protozoans (single-celled protists that prey on other microscopic life) are zooplankton, including zooflagellates, fo ...
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Phytoplankton
Phytoplankton () are the autotrophic (self-feeding) components of the plankton community and a key part of ocean and freshwater ecosystems. The name comes from the Greek words (), meaning 'plant', and (), meaning 'wanderer' or 'drifter'. Phytoplankton obtain their energy through photosynthesis, as do trees and other plants on land. This means phytoplankton must have light from the sun, so they live in the well-lit surface layers (euphotic zone) of oceans and lakes. In comparison with terrestrial plants, phytoplankton are distributed over a larger surface area, are exposed to less seasonal variation and have markedly faster turnover rates than trees (days versus decades). As a result, phytoplankton respond rapidly on a global scale to climate variations. Phytoplankton form the base of marine and freshwater food webs and are key players in the global carbon cycle. They account for about half of global photosynthetic activity and at least half of the oxygen production, despite ...
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Primary Production
In ecology, primary production is the synthesis of organic compounds from atmospheric or aqueous carbon dioxide. It principally occurs through the process of photosynthesis, which uses light as its source of energy, but it also occurs through chemosynthesis, which uses the oxidation or reduction of inorganic chemical compounds as its source of energy. Almost all life on Earth relies directly or indirectly on primary production. The organisms responsible for primary production are known as ''primary producers'' or autotrophs, and form the base of the food chain. In terrestrial ecoregions, these are mainly plants, while in aquatic ecoregions algae predominate in this role. Ecologists distinguish primary production as either ''net'' or ''gross'', the former accounting for losses to processes such as cellular respiration, the latter not. Overview Primary production is the production of chemical energy in organic compounds by living organisms. The main source of this energy is su ...
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Measurement Error
Observational error (or measurement error) is the difference between a measured value of a quantity and its true value.Dodge, Y. (2003) ''The Oxford Dictionary of Statistical Terms'', OUP. In statistics, an error is not necessarily a " mistake". Variability is an inherent part of the results of measurements and of the measurement process. Measurement errors can be divided into two components: ''random'' and ''systematic''. Random errors are errors in measurement that lead to measurable values being inconsistent when repeated measurements of a constant attribute or quantity are taken. Systematic errors are errors that are not determined by chance but are introduced by repeatable processes inherent to the system. Systematic error may also refer to an error with a non-zero mean, the effect of which is not reduced when observations are averaged. Measurement errors can be summarized in terms of accuracy and precision. Measurement error should not be confused with measurement uncer ...
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