Nematode Orders
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Nematode Orders
The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant-parasitic nematodes also known as eelworms. They are a diverse animal phylum inhabiting a broad range of environments. Less formally, they are categorized as Helminths, but are taxonomically classified along with arthropods, tardigrades and other moulting animals in the clade Ecdysozoa, and unlike flatworms, have tubular digestive systems with openings at both ends. Like tardigrades, they have a reduced number of Hox genes, but their sister phylum Nematomorpha has kept the ancestral protostome Hox genotype, which shows that the reduction has occurred within the nematode phylum. Nematode species can be difficult to distinguish from one another. Consequently, estimates of the number of nematode species described to date vary by author and may change rapidly over time. A 2013 survey of animal biodiversity published in the mega journal ...
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Precambrian
The Precambrian (or Pre-Cambrian, sometimes abbreviated pꞒ, or Cryptozoic) is the earliest part of Earth's history, set before the current Phanerozoic Eon. The Precambrian is so named because it preceded the Cambrian, the first period of the Phanerozoic Eon, which is named after Cambria, the Latinised name for Wales, where rocks from this age were first studied. The Precambrian accounts for 88% of the Earth's geologic time. The Precambrian is an informal unit of geologic time, subdivided into three eons ( Hadean, Archean, Proterozoic) of the geologic time scale. It spans from the formation of Earth about 4.6 billion years ago ( Ga) to the beginning of the Cambrian Period, about million years ago ( Ma), when hard-shelled creatures first appeared in abundance. Overview Relatively little is known about the Precambrian, despite it making up roughly seven-eighths of the Earth's history, and what is known has largely been discovered from the 1960s onwards. The Precambrian fossil ...
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Platyhelminthe
The flatworms, flat worms, Platyhelminthes, or platyhelminths (from the Greek πλατύ, ''platy'', meaning "flat" and ἕλμινς (root: ἑλμινθ-), ''helminth-'', meaning "worm") are a phylum of relatively simple bilaterian, unsegmented, soft-bodied invertebrates. Unlike other bilaterians, they are acoelomates (having no body cavity), and have no specialized circulatory and respiratory organs, which restricts them to having flattened shapes that allow oxygen and nutrients to pass through their bodies by diffusion. The digestive cavity has only one opening for both ingestion (intake of nutrients) and egestion (removal of undigested wastes); as a result, the food cannot be processed continuously. In traditional medicinal texts, Platyhelminthes are divided into Turbellaria, which are mostly non-parasitic animals such as planarians, and three entirely parasitic groups: Cestoda, Trematoda and Monogenea; however, since the turbellarians have since been proven not to be mo ...
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Lithosphere
A lithosphere () is the rigid, outermost rocky shell of a terrestrial planet or natural satellite. On Earth, it is composed of the crust (geology), crust and the portion of the upper mantle (geology), mantle that behaves elastically on time scales of up to thousands of years or more. The crust and upper mantle (Earth), upper mantle are distinguished on the basis of chemistry and mineralogy. Earth's lithosphere Earth's lithosphere, which constitutes the hard and rigid outer vertical layer of the Earth, includes the crust and the uppermost mantle. The lithosphere is underlain by the asthenosphere which is the weaker, hotter, and deeper part of the upper mantle. The lithosphere–asthenosphere boundary is defined by a difference in response to stress. The lithosphere remains rigid for very long periods of geologic time in which it deforms elastically and through brittle failure, while the asthenosphere deforms viscously and accommodates strain through plasticity (physics), pl ...
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Oceanic Trench
Oceanic trenches are prominent long, narrow topographic depressions of the ocean floor. They are typically wide and below the level of the surrounding oceanic floor, but can be thousands of kilometers in length. There are about of oceanic trenches worldwide, mostly around the Pacific Ocean, but also in the eastern Indian Ocean and a few other locations. The greatest ocean depth measured is in the Challenger Deep of the Mariana Trench, at a depth of below sea level. Oceanic trenches are a feature of the Earth's distinctive plate tectonics. They mark the locations of convergent plate boundaries, along which lithospheric plates move towards each other at rates that vary from a few millimeters to over ten centimeters per year. Oceanic lithosphere moves into trenches at a global rate of about 3 km2/yr. A trench marks the position at which the flexed, subducting slab begins to descend beneath another lithospheric slab. Trenches are generally parallel to and about from a vol ...
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Ecosystem
An ecosystem (or ecological system) consists of all the organisms and the physical environment with which they interact. These biotic and abiotic components are linked together through nutrient cycles and energy flows. Energy enters the system through photosynthesis and is incorporated into plant tissue. By feeding on plants and on one another, animals play an important role in the movement of matter and energy through the system. They also influence the quantity of plant and microbial biomass present. By breaking down dead organic matter, decomposers release carbon back to the atmosphere and facilitate nutrient cycling by converting nutrients stored in dead biomass back to a form that can be readily used by plants and microbes. Ecosystems are controlled by external and internal factors. External factors such as climate, parent material which forms the soil and topography, control the overall structure of an ecosystem but are not themselves influenced by the ecosystem. ...
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Species Complex
In biology, a species complex is a group of closely related organisms that are so similar in appearance and other features that the boundaries between them are often unclear. The taxa in the complex may be able to hybridize readily with each other, further blurring any distinctions. Terms that are sometimes used synonymously but have more precise meanings are cryptic species for two or more species hidden under one species name, sibling species for two (or more) species that are each other's closest relative, and species flock for a group of closely related species that live in the same habitat. As informal taxonomic ranks, species group, species aggregate, macrospecies, and superspecies are also in use. Two or more taxa that were once considered conspecific (of the same species) may later be subdivided into infraspecific taxa (taxa within a species, such as bacterial strains or plant varieties), that is complex but it is not a species complex. A species complex is in most cas ...
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DNA Barcoding
DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that by comparison with a reference library of such DNA sections (also called "sequences"), an individual sequence can be used to uniquely identify an organism to species, just as a supermarket scanner uses the familiar black stripes of the UPC barcode to identify an item in its stock against its reference database. These "barcodes" are sometimes used in an effort to identify unknown species or parts of an organism, simply to catalog as many taxa as possible, or to compare with traditional taxonomy in an effort to determine species boundaries. Different gene regions are used to identify the different organismal groups using barcoding. The most commonly used barcode region for animals and some protists is a portion of the cytochrome ''c'' oxidase I (COI or COX1) gene, found in mitochondrial DNA. Other genes suitable for DNA barcoding ar ...
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Rarefaction (ecology)
In ecology, rarefaction is a technique to assess species richness from the results of sampling. Rarefaction allows the calculation of species richness for a given number of individual samples, based on the construction of so-called rarefaction curves. This curve is a plot of the number of species as a function of the number of samples. Rarefaction curves generally grow rapidly at first, as the most common species are found, but the curves plateau as only the rarest species remain to be sampled. The issue that occurs when sampling various species in a community is that the larger the number of individuals sampled, the more species that will be found. Rarefaction curves are created by randomly re-sampling the pool of ''N'' samples multiple times and then plotting the average number of species found in each sample (1,2, ... N). "Thus rarefaction generates the expected number of species in a small collection of ''n'' individuals (or ''n'' samples) drawn at random from the large pool of ...
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Neontology
Neontology is a part of biology that, in contrast to paleontology, deals with living (or, more generally, '' recent'') organisms. It is the study of extant taxa (singular: extant taxon): taxa (such as species, genera and families) with members still alive, as opposed to (all) being extinct. For example: * The moose (''Alces alces'') is an extant species, and the dodo (''Raphus cucullatus'') is an extinct species. * In the group of molluscs known as the cephalopods, there were approximately 600 extant species and 7,500 extinct species. A taxon can be classified as extinct if it is broadly agreed or certified that no members of the group are still alive. Conversely, an extinct taxon can be reclassified as extant if there are new discoveries of living species ("Lazarus species"), or if previously-known extant species are reclassified as members of the taxon. Most biologists, zoologists, and botanists are in practice neontologists, and the term neontologist is used largel ...
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Zootaxa
''Zootaxa'' is a peer-reviewed scientific mega journal for animal taxonomists. It is published by Magnolia Press (Auckland, New Zealand). The journal was established by Zhi-Qiang Zhang in 2001 and new issues are published multiple times a week. From 2001 to 2020, more than 60,000 new species have been described in the journal accounting for around 25% of all new taxa indexed in The Zoological Record in the last few years. Print and online versions are available. Temporary suspension from JCR The journal exhibited high levels of self-citation and its journal impact factor of 2019 was suspended from ''Journal Citation Reports'' in 2020, a sanction which hit 34 journals in total. Biologist Ross Mounce noted that high levels of self-citation may be inevitable for a journal which publishes a large share of new species classification. Later that year this decision was reversed and it was admitted that levels of self-citation are appropriate considering the large proportion of papers f ...
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Mega Journal
A mega journal (also mega-journal and megajournal) is a peer-reviewed academic open access journal designed to be much larger than a traditional journal by exercising low selectivity among accepted articles. It was pioneered by '' PLOS ONE''. This "very lucrative publishing model" was soon emulated by other publishers. Definition A mega journal has the following defining characteristics: * broad coverage of different subject areas; * accepting articles for publication based on whether they are technically sound rather than selecting for perceived importance; and * using article processing charges to cover the costs of publishing. Other less universal characteristics are * "an accelerated review and publication process", "fast turnaround time"; * "academic editors", even "a large editorial board of academic editors", (instead of professional editors); and * value-added services such as reusable graphics and data through Creative Commons licenses. Mega journals are also online-only, w ...
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Species
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. However, only about 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomial". The first part of a binomial is the genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes i ...
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