Mesorhizobium Loti
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Mesorhizobium Loti
''Mesorhizobium loti'', formerly known as ''Rhizobium loti'', is a Gram negative species of bacteria found in the root nodules of many plant species. Its name is a reference to ''Lotus corniculatus ''Lotus corniculatus'' is a flowering plant in the pea family Fabaceae, native to grasslands in temperate Eurasia and North Africa. Common names include common bird's-foot trefoil, eggs and bacon, birdsfoot deervetch, and just bird's-foot trefoi ...'', a flowering plant from which it was originally isolated. Genetics The complete genome sequence of a strain of ''M. loti'' was determined in 2000. Unusually, ''M. loti'' has two Ku genes ('' mlr9624'' and '' mlr9623'') instead of the usual one in each bacterial species. (Ku is involved in NHEJ repair.) See also *'' Rhizobium galegae'' References Further reading * Type strain of ''Mesorhizobium loti'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Phyllobacteriaceae Bacteria described in 1982 {{Phyllobacteri ...
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Gram-negative Bacteria
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipopol ...
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Root Nodule
Root nodules are found on the roots of plants, primarily legumes, that form a symbiosis with nitrogen-fixing bacteria. Under nitrogen-limiting conditions, capable plants form a symbiotic relationship with a host-specific strain of bacteria known as rhizobia. This process has evolved multiple times within the legumes, as well as in other species found within the Rosid clade. Legume crops include beans, peas, and soybeans. Within legume root nodules, nitrogen gas (N2) from the atmosphere is converted into ammonia (NH3), which is then assimilated into amino acids (the building blocks of proteins), nucleotides (the building blocks of DNA and RNA as well as the important energy molecule ATP), and other cellular constituents such as vitamins, flavones, and hormones. Their ability to fix gaseous nitrogen makes legumes an ideal agricultural organism as their requirement for nitrogen fertilizer is reduced. Indeed, high nitrogen content blocks nodule development as there is no benefit ...
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Lotus Corniculatus
''Lotus corniculatus'' is a flowering plant in the pea family Fabaceae, native to grasslands in temperate Eurasia and North Africa. Common names include common bird's-foot trefoil, eggs and bacon, birdsfoot deervetch, and just bird's-foot trefoil, though the latter name is often also applied to other members of the genus. It is a Perennial plant, perennial herbaceous plant, similar in appearance to some clovers. The name 'bird's foot' refers to the appearance of the seed pods on their stalk. Five leaflets are present, but with the central three held conspicuously above the others, hence the use of the name 'trefoil'. It is often used as forage and is widely used as food for livestock due to its nonbloating properties. Description The height of the plant is variable, from , occasionally more where supported by other plants; the stems can reach up to long. It is typically sprawling at the height of the surrounding grassland. It can survive fairly close grazing, trampling, and mow ...
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Ku (protein)
Ku is a dimeric protein complex that binds to DNA double-strand break ends and is required for the non-homologous end joining (NHEJ) pathway of DNA repair. Ku is evolutionarily conserved from bacteria to humans. The ancestral bacterial Ku is a homodimer (two copies of the same protein bound to each other). Eukaryotic Ku is a heterodimer of two polypeptides, Ku70 (XRCC6) and Ku80 (XRCC5), so named because the molecular weight of the human Ku proteins is around 70 kDa and 80 kDa. The two Ku subunits form a basket-shaped structure that threads onto the DNA end. Once bound, Ku can slide down the DNA strand, allowing more Ku molecules to thread onto the end. In higher eukaryotes, Ku forms a complex with the DNA-dependent protein kinase catalytic subunit (DNA-PKcs) to form the full DNA-dependent protein kinase, DNA-PK. Ku is thought to function as a molecular scaffold to which other proteins involved in NHEJ can bind, orienting the double-strand break for ligation. The Ku70 and ...
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Mlr9624
Ku is a dimeric protein complex that binds to DNA double-strand break ends and is required for the non-homologous end joining (NHEJ) pathway of DNA repair. Ku is evolutionarily conserved from bacteria to humans. The ancestral bacterial Ku is a homodimer (two copies of the same protein bound to each other). Eukaryotic Ku is a heterodimer of two polypeptides, Ku70 (XRCC6) and Ku80 (XRCC5), so named because the molecular weight of the human Ku proteins is around 70 kDa and 80 kDa. The two Ku subunits form a basket-shaped structure that threads onto the DNA end. Once bound, Ku can slide down the DNA strand, allowing more Ku molecules to thread onto the end. In higher eukaryotes, Ku forms a complex with the DNA-dependent protein kinase catalytic subunit (DNA-PKcs) to form the full DNA-dependent protein kinase, DNA-PK. Ku is thought to function as a molecular scaffold to which other proteins involved in NHEJ can bind, orienting the double-strand break for ligation. The Ku70 and ...
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Mlr9623
Ku is a dimeric protein complex that binds to DNA double-strand break ends and is required for the non-homologous end joining (NHEJ) pathway of DNA repair. Ku is evolutionarily conserved from bacteria to humans. The ancestral bacterial Ku is a homodimer (two copies of the same protein bound to each other). Eukaryotic Ku is a heterodimer of two polypeptides, Ku70 (XRCC6) and Ku80 (XRCC5), so named because the molecular weight of the human Ku proteins is around 70 kDa and 80 kDa. The two Ku subunits form a basket-shaped structure that threads onto the DNA end. Once bound, Ku can slide down the DNA strand, allowing more Ku molecules to thread onto the end. In higher eukaryotes, Ku forms a complex with the DNA-dependent protein kinase catalytic subunit (DNA-PKcs) to form the full DNA-dependent protein kinase, DNA-PK. Ku is thought to function as a molecular scaffold to which other proteins involved in NHEJ can bind, orienting the double-strand break for ligation. The Ku70 and ...
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Non-homologous End Joining
Non-homologous end joining (NHEJ) is a pathway that repairs double-strand breaks in DNA. NHEJ is referred to as "non-homologous" because the break ends are directly ligated without the need for a homologous template, in contrast to homology directed repair(HDR), which requires a homologous sequence to guide repair. NHEJ is active in both non-dividing and proliferating cells, while HDR is not readily accessible in non-dividing cells. The term "non-homologous end joining" was coined in 1996 by Moore and Haber. NHEJ is typically guided by short homologous DNA sequences called microhomologies. These microhomologies are often present in single-stranded overhangs on the ends of double-strand breaks. When the overhangs are perfectly compatible, NHEJ usually repairs the break accurately. Imprecise repair leading to loss of nucleotides can also occur, but is much more common when the overhangs are not compatible. Inappropriate NHEJ can lead to translocations and telomere fusion, hallmarks ...
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Annual Review Of Microbiology
The ''Annual Review of Microbiology'' is a peer-reviewed academic journal that publishes review articles about microbiology. It was first published in 1947 as the third journal title released by Annual Reviews. It covers significant developments in the field of microbiology, including the study of bacteria, archaea, viruses, and unicellular eukaryotes. As of 2020, it has had four editors, with Charles E. Clifton and L. Nicholas Ornston serving more than twenty years each. The current editor is Susan Gottesman. History The ''Annual Review of Microbiology'' was first published in 1947, the third journal title released by the publishing company Annual Reviews, following titles in biochemistry and physiology. Its first editor was Charles E. Clifton. From 1956 to 1958, Pierre Grabar provided a summary of the microbiologic literature appearing in the Russian language through a partnership with the National Science Foundation. This was no longer necessary as abstracts became incr ...
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Annual Reviews (publisher)
Annual Reviews is an independent, non-profit academic publishing company based in San Mateo, California. As of 2021, it publishes 51 journals of review articles and ''Knowable Magazine'', covering the fields of life, biomedical, physical, and social sciences. Review articles are usually “peer-invited” solicited submissions, often planned one to two years in advance, which go through a peer-review process. The organizational structure has three levels: a volunteer board of directors, editorial committees of experts for each journal, and paid employees. Annual Reviews' stated mission is to synthesize and integrate knowledge "for the progress of science and the benefit of society". The first Annual Reviews journal, the ''Annual Review of Biochemistry'', was published in 1932 under the editorship of Stanford University chemist J. Murray Luck, who wanted to create a resource that provided critical reviews on contemporary research. The second journal was added in 1939. By ...
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Rhizobium Galegae
''Neorhizobium galegae'' is a Gram negative root nodule bacteria. It forms nitrogen-fixing Nitrogen fixation is a chemical process by which molecular nitrogen (), with a strong triple covalent bond, in the air is converted into ammonia () or related nitrogenous compounds, typically in soil or aquatic systems but also in industry. Atm ... root nodules on legumes in the genus '' Galega''. References Rhizobiaceae Bacteria described in 2014 {{Hyphomicrobiales-stub ...
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Phyllobacteriaceae
The Phyllobacteriaceae are a family of bacteria. The most common genus is ''Mesorhizobium'' which contains some of the rhizobia species. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature ... (LPSN). The phylogeny is based on whole-genome analysis. Notes References Hyphomicrobiales {{Phyllobacteriaceae-stub ...
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