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List Of Proprietary Bioinformatics Software
This is a list of computer software which is made for bioinformatics and is developed under proprietary licenses with articles in Wikipedia. See also * List of sequence alignment software * List of open-source bioinformatics software * List of open-source healthcare software * List of biomedical cybernetics software * List of freeware health software * List of molecular graphics systems * Comparison of software for molecular mechanics modeling References External links Free Biology Software– Free Software Directory – Free Software Foundation The Free Software Foundation (FSF) is a 501(c)#501(c)(3), 501(c)(3) non-profit organization founded by Richard Stallman on October 4, 1985, to support the free software movement, with the organization's preference for software being distributed ... {{DEFAULTSORT:Proprietary bioinformatics software Lists of bioinformatics software * ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Software
Software is a set of computer programs and associated documentation and data. This is in contrast to hardware, from which the system is built and which actually performs the work. At the lowest programming level, executable code consists of machine language instructions supported by an individual processor—typically a central processing unit (CPU) or a graphics processing unit (GPU). Machine language consists of groups of binary values signifying processor instructions that change the state of the computer from its preceding state. For example, an instruction may change the value stored in a particular storage location in the computer—an effect that is not directly observable to the user. An instruction may also invoke one of many input or output operations, for example displaying some text on a computer screen; causing state changes which should be visible to the user. The processor executes the instructions in the order they are provided, unless it is instructed ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bioinformatics
Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combines biology, chemistry, physics, computer science, information engineering, mathematics and statistics to analyze and interpret the biological data. Bioinformatics has been used for '' in silico'' analyses of biological queries using computational and statistical techniques. Bioinformatics includes biological studies that use computer programming as part of their methodology, as well as specific analysis "pipelines" that are repeatedly used, particularly in the field of genomics. Common uses of bioinformatics include the identification of candidates genes and single nucleotide polymorphisms (SNPs). Often, such identification is made with the aim to better understand the genetic basis of disease, unique adaptations, desirable properties (e ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Proprietary License
Proprietary software is computer software, software that is deemed within the free and open-source software to be non-free because its creator, publisher, or other rightsholder or rightsholder partner exercises a legal monopoly afforded by modern copyright and intellectual property law to exclude the recipient from freely sharing the software or modifying it, and—in some cases, as is the case with some patent-encumbered and EULA-bound software—from making use of the software on their own, thereby restricting his or her freedoms. It is often contrasted with Open-source software, open-source or free software. For this reason, it is also known as non-free software or closed-source software. Types Origin Until the late 1960s computers—large and expensive mainframe computers, machines in specially air-conditioned computer rooms—were usually leased to customers rather than Sales, sold. Service and all software available were usually supplied by manufacturers without ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Abalone (molecular Mechanics)
Abalone is a general purpose molecular dynamics and molecular graphics program for simulations of bio-molecules in a periodic boundary conditions in explicit (flexible SPC water model) or in implicit water models. Mainly designed to simulate the protein folding and DNA-ligand complexes in AMBER force field. Key features * 3D molecular graphics Automatic Force Field generator for bioelements: H, C, N, O* Building and editing chemical structures * Library of building blocks * Force fields: Assisted Model Building with Energy Refinement (AMBER) 94, 96, 99SB, 03; Optimized Potentials for Liquid Simulations (OPLS) * Geometry optimizing * Molecular dynamics with multiple time step integrator * Hybrid Monte Carlo * Replica exchange * Interface with quantum chemistry - ORCA, NWChem, Firefly (PC GAMESS), CP2K CP2K is a freely available (GPL) quantum chemistry and solid state physics program package, written in Fortran 2008, to perform atomistic simulations of solid state, liquid ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
TINKER
Tinker or tinkerer is an archaic term for an itinerant tinsmith who mends household utensils. Description ''Tinker'' for metal-worker is attested from the thirteenth century as ''tyckner'' or ''tinkler''. Some travelling groups and Romani people specialised in the trade, and the name was particularly associated with indigenous Irish Travellers and Scottish Highland Travellers – the name of whose language '' Beurla Reagaird'' means "speech of the metalworkers".Kirk, J. & Ó Baoill, D. ''Travellers and their Language'' (2002) Queen's University Belfast However, this use is considered offensive. The term "tinker", in British English, may refer to a mischievous child. Some modern-day nomads with an English, an Irish or a Scottish influence call themselves "techno-tinkers" or "technogypsies" in a revival of sorts of the romantic view of the tinker's lifestyle. "Tinker's dam" or "damn" and "tinker's curse" Both phrases tinker's damn and tinker's curse can be applied to ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Sequence Alignment Software
This list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequence alignment. See structural alignment software for structural alignment of proteins. Database search only *Sequence type: protein or nucleotide Pairwise alignment *Sequence type: protein or nucleotide **Alignment type: local or global Multiple sequence alignment *Sequence type: protein or nucleotide. **Alignment type: local or global Genomics analysis *Sequence type: protein or nucleotide Motif finding *Sequence type: protein or nucleotide Benchmarking Alignment viewers, editors Please see List of alignment visualization software. Short-read sequence alignment See also * List of open source bioinformatics software References {{Reflist Sequence Sequence alignment software This list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequen ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Open-source Bioinformatics Software
This is a list of computer software which is made for bioinformatics and released under open-source software licenses with articles in Wikipedia. See also * List of sequence alignment software * List of open-source healthcare software * List of biomedical cybernetics software * List of freeware health software * List of genetic engineering software * List of molecular graphics systems * List of systems biology modelling software * Comparison of software for molecular mechanics modeling * List of proprietary bioinformatics software References External links Free Biology Software– Free Software Directory – Free Software Foundation {{DEFAULTSORT:Open source bioinformatics software Lists of bioinformatics software * Bioinformatics Open Open or OPEN may refer to: Music * Open (band), Australian pop/rock band * The Open (band), English indie rock band * ''Open'' (Blues Image album), 1969 * ''Open'' (Gotthard album), 1999 * ''Open'' (Cowboy Junkies album), 2001 * ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Open-source Healthcare Software
The following is a list of notable software packages and applications licensed under an open-source license or in the public domain for use in the health care industry. Public health and biosurveillance *Epi Info is public domain statistical software for epidemiology developed by Centers for Disease Control and Prevention. *Spatiotemporal Epidemiological Modeler is a tool, originally developed at IBM Research, for modelings and visualizing the spread of infectious diseases. It is maintained by the Eclipse Foundation and available under terms of the Eclipse Public License. Electronic records and medical practice management Health system management * iHRIS is an integrated Human Resource Information System developed by IntraHealth International under USAID-funded CapacityPlus project and deployed in more than 20 countries in the world. iHRIS is distributed under the GNU GPL. * DHIS is a district health management information system and data warehouse. DHIS2 is released u ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Biomedical Cybernetics Software
The following is a list of software packages and applications for biocybernetics research. Data formats and specifications * Systems Biology Markup Language (SBML) * Biological Pathway Exchange (BioPAX) * CellML * Minimum Information About a Simulation Experiment (MIASE) * Minimum information required in the annotation of models (MIRIAM) * Systems Biology Ontology (SBO) * Systems Biology Graphical Notation (SBGN) Libraries for software development * CyberUnits, a class library for computer simulations in life sciences Software products * SimThyr – Simulation system for thyroid homeostasis See also * List of sequence alignment software * List of open-source healthcare software * List of open-source bioinformatics software * List of proprietary bioinformatics software * List of freeware health software * List of molecular graphics systems * List of systems biology modeling software * Comparison of software for molecular mechanics modeling * BioLinux Other collections ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Freeware Health Software
The following is a list of freeware software packages and applications for use in the health industry: Imaging * Ambivu 3D Workstation, PC and Mac fast DICOM 3D/2D workstation * BioDigital * Ginkgo CADx, cross-platform open source DICOM viewer * IrfanView, an image viewer for Windows with DICOM support * MicroDicom, DICOM viewer for Windows * VistA imaging, public domain fully integrated PACS, image, and scanned document information system. Incorporates proprietary modules not available outside the VA Practice management *GaiaEHR *GNUmed *OpenEMR *OpenMRS See also *eHealth *Health Informatics *List of open-source bioinformatics software References {{DEFAULTSORT:List of Freeware Health Software Freeware Freeware is software, most often proprietary, that is distributed at no monetary cost to the end user. There is no agreed-upon set of rights, license, or EULA that defines ''freeware'' unambiguously; every publisher defines its own rules for the f ... Freeware List ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
List Of Molecular Graphics Systems
This is a list of notable software systems that are used for visualizing macromolecules. Key The tables below indicate which types of data can be visualized in each system: See also * Biological data visualization * Comparison of nucleic acid simulation software * Comparison of software for molecular mechanics modeling * List of microscopy visualization systems * List of open-source bioinformatics software * Molecular graphics * Molecule editor A molecule editor is a computer program for creating and modifying representations of chemical structures. Molecule editors can manipulate chemical structure representations in either a simulated two-dimensional space or three-dimensional space, v ... References External links * A rather detailed, objective, and technical assessment of about 20 tools. * * * {{Chemistry software Chemistry software molecular graphics systems Molecular modelling ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Comparison Of Software For Molecular Mechanics Modeling
This is a list of computer programs that are predominantly used for molecular mechanics calculations. See also *Car–Parrinello molecular dynamics *Comparison of force-field implementations *Comparison of nucleic acid simulation software *List of molecular graphics systems *List of protein structure prediction software *List of quantum chemistry and solid-state physics software * List of software for Monte Carlo molecular modeling * List of software for nanostructures modeling *Molecular design software *Molecular dynamics *Molecular modeling on GPUs *Molecule editor A molecule editor is a computer program for creating and modifying representations of chemical structures. Molecule editors can manipulate chemical structure representations in either a simulated two-dimensional space or three-dimensional space, v ... Notes and references External linksSINCRIS [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
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