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Lichinales
Lichinales is the sole order of ascomycete fungi in the class Lichinomycetes. It contains three families: Gloeoheppiaceae (3 genera), Lichinaceae (43 genera), and Peltulaceae (1 genus). Most species are lichenized. Lichinales was proposed in 1986 by German lichenologists Aino Henssen and Burkhard Büdel. The class Lichinomycetes was created by Valérie Reeb, François Lutzoni and Claude Roux in 2004. A study published in late 2022 suggests that six classes of fungi, Candelariomycetes, Coniocybomycetes, Geoglossomycetes, Lichinomycetes, Sareomycetes, and Xylonomycetes, are all part of a clade that has a sister relationship with a clade containing Lecanoromycetes and Eurotiomycetes. Lichinomycetes is the oldest name among these orders, and so the authors used this name for the group. Phylogenomic analysis of a 481-genome set showed that as a group, the Lichinomycetes have relatively small genomes, and fewer metabolic gene clusters; one consequence of this is an inability to ...
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Lichinomycetes
Lichinales is the sole order of ascomycete fungi in the class Lichinomycetes. It contains three families: Gloeoheppiaceae (3 genera), Lichinaceae (43 genera), and Peltulaceae (1 genus). Most species are lichenized. Lichinales was proposed in 1986 by German lichenologists Aino Henssen and Burkhard Büdel. The class Lichinomycetes was created by Valérie Reeb, François Lutzoni and Claude Roux in 2004. A study published in late 2022 suggests that six classes of fungi, Candelariomycetes, Coniocybomycetes, Geoglossomycetes, Lichinomycetes, Sareomycetes, and Xylonomycetes, are all part of a clade that has a sister relationship with a clade containing Lecanoromycetes and Eurotiomycetes. Lichinomycetes is the oldest name among these orders, and so the authors used this name for the group. Phylogenomic analysis of a 481-genome set showed that as a group, the Lichinomycetes have relatively small genomes, and fewer metabolic gene clusters; one consequence of this is an inability to ...
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Lichinaceae
The Lichinaceae are a family of ascomycete fungi. Most species are lichenized with cyanobacteria, and have a distribution largely in temperate regions. Taxonomy The family was circumscribed in 1854 by Finnish lichenologist William Nylander. His description of the family mentioned the obscure brown thallus resembling algae, with an overall morphology described as either filamentous or tufted (fruticose). The fruiting structures, the apothecia, are described as either endocarpous or biatorine. He included two tribes in the Lichinaceae: ''Ephebeae'', which contained the genera ''Ephebe'' and ''Gonionema'', and ''Lichineae'', which contained '' Lichina'', the type genus. In 1986, Aino Henssen and Burkhard Büdel proposed the order Lichinales to contain the Lichinaceae. In the 1980s and 1990s, several taxonomic and nomenclatural studies were the basis for the revision of many of the species in the family. Heppiaceae was a family proposed by Alexander Zahlbruckner in 1906 to co ...
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Gloeoheppiaceae
The Gloeoheppiaceae are a family of ascomycete fungi in the order Lichinales. There are seven species in the family. Most species are lichenized with cyanobacteria. Species in this family are mostly found in desert areas. The family was circumscribed in 1995 by German lichenologist Aino Henssen Aino Marjatta Henssen (12 April 1925, Elberfeld – 29 August 2011, Marburg), was a German lichenologist and systematist. Her father, Gottfried Henssen, was a folklorist and her mother was Finns, Finnish. Education and career Henssen began her stu .... References Lichinomycetes Lichen families Taxa named by Aino Henssen Taxa described in 1995 {{Ascomycetes-stub ...
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Lichina Pygmaea
''Lichina'' is a genus of lichens in the family Lichinaceae. The genus contains seven species. These cyanolichens include maritime species such as '' L. pygmaea'' or '' L. confinis'', in which the associated cyanobiont has been assigned to the genus '' Rivularia''. Furthermore, evidence of a high specificity of each mycobiont towards particular cyanobiont lineages in both species has been detected. Species *''Lichina antarctica'' (1876) *''Lichina confinis'' (1821) *''Lichina intermedia'' (2017) *'' Lichina minutissima'' (1973) *'' Lichina pygmaea'' (1817) *''Lichina tasmanica'' (1969) *''Lichina willeyi ''Lichina'' is a genus of lichens in the family Lichinaceae. The genus contains seven species. These cyanolichens include maritime species such as '' L. pygmaea'' or '' L. confinis'', in which the associated cyanobiont has been assigned ...'' (1969) References Lichinomycetes Lichen genera Taxa described in 1817 Taxa named by Carl Adolph Agard ...
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Ascomycota Orders
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the "ascus" (), a microscopic sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of the Ascomycota are asexual, meaning that they do not have a sexual cycle and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, brewers' and bakers' yeast, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens (loosely termed "ascolichens") such as ''Cladonia'' belong to the Ascomycota. Ascomycota is a monophyletic group (it contains all descendants of one common ancestor). Previously placed in the Deuteromycota along with asexual species from other fungal taxa, asexual (or anamorphic) ascomycetes a ...
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Lichen Orders
A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship.Introduction to Lichens – An Alliance between Kingdoms
. University of California Museum of Paleontology.
Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but are not s. They may have tiny, leafless branches (); flat leaf-like structures (

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Pectin
Pectin ( grc, πηκτικός ': "congealed" and "curdled") is a heteropolysaccharide, a structural acid contained in the primary lamella, in the middle lamella, and in the cell walls of terrestrial plants. The principal, chemical component of pectin is galacturonic acid (a sugar acid derived from galactose) which was isolated and described by Henri Braconnot in 1825. Commercially produced pectin is a white-to-light-brown powder, produced from citrus fruits for use as an edible gelling agent, especially in jams and jellies, dessert fillings, medications, and sweets; and as a chemical stabiliser in fruit juices and milk drinks, and as a source of dietary fiber. Biology Pectin is composed of complex polysaccharides that are present in the primary cell walls of a plant, and are abundant in the green parts of terrestrial plants. Pectin is the principal component of the middle lamella, where it binds cells. Pectin is deposited by exocytosis into the cell wall via vesicles produc ...
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Cellulose
Cellulose is an organic compound with the formula , a polysaccharide consisting of a linear chain of several hundred to many thousands of β(1→4) linked D-glucose units. Cellulose is an important structural component of the primary cell wall of green plants, many forms of algae and the oomycetes. Some species of bacteria secrete it to form biofilms. Cellulose is the most abundant organic polymer on Earth. The cellulose content of cotton fiber is 90%, that of wood is 40–50%, and that of dried hemp is approximately 57%. Cellulose is mainly used to produce paperboard and paper. Smaller quantities are converted into a wide variety of derivative products such as cellophane and rayon. Conversion of cellulose from energy crops into biofuels such as cellulosic ethanol is under development as a renewable fuel source. Cellulose for industrial use is mainly obtained from wood pulp and cotton. Some animals, particularly ruminants and termites, can digest cellulose with the help of ...
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Metabolic Gene Cluster
Metabolic gene clusters or biosynthetic gene clusters are tightly linked sets of mostly non-homologous genes participating in a common, discrete metabolic pathway. The genes are in physical vicinity to each other on the genome, and their expression is often coregulated. Metabolic gene clusters are common features of bacterial and most fungal genomes, and are less often found in other organisms. They are most widely known for producing secondary metabolites, which are the source or basis of most pharmaceutical compounds, natural toxins, and chemical communication and chemical warfare between organisms. Metabolic gene clusters are also involved in nutrient acquisition, toxin degradation, antimicrobial resistance, and vitamin biosynthesis. Given all these properties of metabolic gene clusters, they play a key role in shaping microbial ecosystems, including microbiome-host interactions. Thus several computational genomics tools have been developed to predict metabolic gene clusters. Da ...
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Genome
In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of 'junk' DNA with no evident function. Almost all eukaryotes have mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The International Human Genome Project reported the sequence of the genome for ''Homo sapiens'' in 200The Human Genome Project although the initial "finished" sequence was missing 8% of the genome consisting mostly of repetitive sequences. With advancements in technology that could handle sequenci ...
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Phylogenomic
Phylogenomics is the intersection of the fields of evolution and genomics. The term has been used in multiple ways to refer to analysis that involves genome data and evolutionary reconstructions. It is a group of techniques within the larger fields of phylogenetics and genomics. Phylogenomics draws information by comparing entire genomes, or at least large portions of genomes. Phylogenetics compares and analyzes the sequences of single genes, or a small number of genes, as well as many other types of data. Four major areas fall under phylogenomics: * Prediction of gene function * Establishment and clarification of evolutionary relationships * Gene family evolution * Prediction and retracing lateral gene transfer. The ultimate goal of phylogenomics is to reconstruct the evolutionary history of species through their genomes. This history is usually inferred from a series of genomes by using a genome evolution model and standard statistical inference methods (e.g. Bayesian inference or ...
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Eurotiomycetes
Eurotiomycetes is a large class of ascomycetes with cleistothecial ascocarps within the subphylum Pezizomycotina, currently containing around 3810 species according to the Catalogue of Life. It is the third largest lichen A lichen ( , ) is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship. It contains most of the fungi previously known morphologically as "Plectomycetes".


Systematics and phylogeny


Internal relationships

The class Eurotiomycetes was circumscription (taxonomy), circumscribed in 1997 by Sweden, Swedish mycologists Ove Erik Eriksson and Katarina Winka. At that time ...

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