JUICE (software)
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JUICE (software)
250px JUICE is a widely used non-commercial software package for editing and analysing phytosociological data. It was developed at the Masaryk University in Brno, Czech Republic in 1998, and is fully described in English manual. It makes use of the previously-developed TURBOVEG software for entering and storing such data) and it offers a quite powerful tool for vegetation data analysis, including: *creation of synoptic tables *determination of diagnostic species according to their fidelity *calculation of Ellenberg indicator values for relevés, various indices of alpha and beta diversity *classification of relevés using TWINSPAN or cluster analysis *expert system for vegetation classification based on COCKTAIL method etc. See also *Phytosociology *Phytogeography *Biogeography Biogeography is the study of the distribution of species and ecosystems in geographic space and through geological time. Organisms and biological communities often vary in a regular fashion alo ...
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Juice Soft
Juice is a drink made from the extraction or pressing of the natural liquid contained in fruit and vegetables. It can also refer to liquids that are flavored with concentrate or other biological food sources, such as meat or seafood, such as clam juice. Juice is commonly consumed as a beverage or used as an ingredient or flavoring in foods or other beverages, as for smoothies. Juice emerged as a popular beverage choice after the development of pasteurization methods enabled its preservation without using fermentation (which is used in wine production). The largest fruit juice consumers are New Zealand (nearly a cup, or 8 ounces, each day) and Colombia (more than three quarters of a cup each day). Fruit juice consumption on average increases with a country's income level. Etymology The word "juice" comes from Old French in about 1300; it developed from the Old French words "''jus, juis, jouis''", which mean "liquid obtained by boiling herbs". The "Old French ''jus'' "juice, s ...
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Software
Software is a set of computer programs and associated documentation and data. This is in contrast to hardware, from which the system is built and which actually performs the work. At the lowest programming level, executable code consists of machine language instructions supported by an individual processor—typically a central processing unit (CPU) or a graphics processing unit (GPU). Machine language consists of groups of binary values signifying processor instructions that change the state of the computer from its preceding state. For example, an instruction may change the value stored in a particular storage location in the computer—an effect that is not directly observable to the user. An instruction may also invoke one of many input or output operations, for example displaying some text on a computer screen; causing state changes which should be visible to the user. The processor executes the instructions in the order they are provided, unless it is instructed ...
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Phytosociology
Phytosociology, also known as phytocoenology or simply plant sociology, is the study of groups of species of plant that are usually found together. Phytosociology aims to empirically describe the vegetative environment of a given territory. A specific community of plants is considered a social unit, the product of definite conditions, present and past, and can exist only when such conditions are met. In phyto-sociology, such a unit is known as a phytocoenosis (or phytocoenose). A phytocoenosis is more commonly known as a plant community, and consists of the sum of all plants in a given area. It is a subset of a biocoenosis, which consists of all organisms in a given area. More strictly speaking, a phytocoenosis is a set of plants in area that are interacting with each other through competition or other ecological processes. Coenoses are not equivalent to ecosystems, which consist of organisms and the physical environment that they interact with. A phytocoensis has a distribution whic ...
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Masaryk University In Brno
Masaryk University (MU) ( cs, Masarykova univerzita; la, Universitas Masarykiana Brunensis) is the second largest university in the Czech Republic, a member of the Compostela Group and the Utrecht Network. Founded in 1919 in Brno as the second Czech university (after Charles University established in 1348 and Palacký University existent in 1573–1860), it now consists of ten faculties and 35,115 students. It is named after Tomáš Garrigue Masaryk, the first president of an independent Czechoslovakia as well as the leader of the movement for a second Czech university. In 1960 the university was renamed ''Jan Evangelista Purkyně University'' after Jan Evangelista Purkyně, a Czech biologist. In 1990, following the Velvet Revolution it regained its original name. Since 1922, over 171,000 students have graduated from the university. History Masaryk University was founded on 28 January 1919 with four faculties: Law, Medicine, Science, and Arts. Tomáš Garrigue Masaryk, p ...
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Czech Republic
The Czech Republic, or simply Czechia, is a landlocked country in Central Europe. Historically known as Bohemia, it is bordered by Austria to the south, Germany to the west, Poland to the northeast, and Slovakia to the southeast. The Czech Republic has a hilly landscape that covers an area of with a mostly temperate continental and oceanic climate. The capital and largest city is Prague; other major cities and urban areas include Brno, Ostrava, Plzeň and Liberec. The Duchy of Bohemia was founded in the late 9th century under Great Moravia. It was formally recognized as an Imperial State of the Holy Roman Empire in 1002 and became a kingdom in 1198. Following the Battle of Mohács in 1526, the whole Crown of Bohemia was gradually integrated into the Habsburg monarchy. The Protestant Bohemian Revolt led to the Thirty Years' War. After the Battle of White Mountain, the Habsburgs consolidated their rule. With the dissolution of the Holy Empire in 1806, the Cro ...
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Indicator Value
Indicator value is a term that has been used in the ecology of plants for two different indices. The older usage of the term refers to Ellenberg's indicator values from 1974, which are based on a simple ordinal classification of plants according to the position of their realized ecological niche along an environmental gradient.Ellenberg H. Zeigerwerte der Gefässpflanzen Mitteleuropas / H. Ellenberg // Scripta geobotanica. Göttingen, 1974. – Vol. 9. – 197 p. Since 1997, the term has also been used to refer to Dufrêne & Legendre's indicator value, which is a quantitative index measuring the statistical alliance of a species to any one of the classes in a classification of sites. According to Ellenberg Ellenberg's indicator values were the first model of bioindication proposed and applied to the flora of Central Europe, and they have a long tradition in interpretation and understanding of plant communities and their evolution. The latest edition of Ellenberg's indicator values ...
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Alpha Diversity
In ecology, alpha diversity (α-diversity) is the mean species diversity in a site at a local scale. The term was introduced by R. H. WhittakerWhittaker, R. H. (1960) Vegetation of the Siskiyou Mountains, Oregon and California. Ecological Monographs, 30, 279–338. Whittaker, R. H. (1972). Evolution and Measurement of Species Diversity. Taxon, 21, 213-251. together with the terms beta diversity (β-diversity) and gamma diversity (γ-diversity). Whittaker's idea was that the total species diversity in a landscape (gamma diversity) is determined by two different things, the mean species diversity in sites at a more local scale (alpha diversity) and the differentiation among those sites (beta diversity). Scale considerations Both the area or landscape of interest and the sites within it may be of very different sizes in different situations, and no consensus has been reached on what spatial scales are appropriate to quantify alpha diversity. It has therefore been proposed that the de ...
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Beta Diversity
Beta (, ; uppercase , lowercase , or cursive ; grc, βῆτα, bē̂ta or ell, βήτα, víta) is the second letter of the Greek alphabet. In the system of Greek numerals, it has a value of 2. In Modern Greek, it represents the voiced labiodental fricative while in borrowed words is instead commonly transcribed as μπ. Letters that arose from beta include the Roman letter and the Cyrillic letters and . Name Like the names of most other Greek letters, the name of beta was adopted from the acrophonic name of the corresponding letter in Phoenician, which was the common Semitic word ''*bait'' ('house'). In Greek, the name was ''bêta'', pronounced in Ancient Greek. It is spelled βήτα in modern monotonic orthography and pronounced . History The letter beta was derived from the Phoenician letter beth . Uses Algebraic numerals In the system of Greek numerals, beta has a value of 2. Such use is denoted by a number mark: Β′. Computing Finance Beta is used i ...
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Data Clustering
Cluster analysis or clustering is the task of grouping a set of objects in such a way that objects in the same group (called a cluster) are more similar (in some sense) to each other than to those in other groups (clusters). It is a main task of exploratory data analysis, and a common technique for statistical data analysis, used in many fields, including pattern recognition, image analysis, information retrieval, bioinformatics, data compression, computer graphics and machine learning. Cluster analysis itself is not one specific algorithm, but the general task to be solved. It can be achieved by various algorithms that differ significantly in their understanding of what constitutes a cluster and how to efficiently find them. Popular notions of clusters include groups with small distances between cluster members, dense areas of the data space, intervals or particular statistical distributions. Clustering can therefore be formulated as a multi-objective optimization problem. The ...
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COCKTAIL
A cocktail is an alcoholic mixed drink. Most commonly, cocktails are either a combination of spirits, or one or more spirits mixed with other ingredients such as tonic water, fruit juice, flavored syrup, or cream. Cocktails vary widely across regions of the world, and many websites publish both original recipes and their own interpretations of older and more famous cocktails. History The origins of the word ''cocktail'' have been debated (see section Etymology). The first written mention of ''cocktail'' as a beverage appeared in ''The Farmers Cabinet,'' 1803 in the United States. The first definition of a cocktail as an alcoholic beverage appeared three years later in ''The Balance and Columbian Repository'' (Hudson, New York) May 13, 1806. Traditionally, cocktail ingredients included spirits, sugar, water and bitters, however, this definition evolved throughout the 1800s, to include the addition of a liqueur. In 1862 Jerry Thomas published a bartenders: guide called ''How ...
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Phytosociology
Phytosociology, also known as phytocoenology or simply plant sociology, is the study of groups of species of plant that are usually found together. Phytosociology aims to empirically describe the vegetative environment of a given territory. A specific community of plants is considered a social unit, the product of definite conditions, present and past, and can exist only when such conditions are met. In phyto-sociology, such a unit is known as a phytocoenosis (or phytocoenose). A phytocoenosis is more commonly known as a plant community, and consists of the sum of all plants in a given area. It is a subset of a biocoenosis, which consists of all organisms in a given area. More strictly speaking, a phytocoenosis is a set of plants in area that are interacting with each other through competition or other ecological processes. Coenoses are not equivalent to ecosystems, which consist of organisms and the physical environment that they interact with. A phytocoensis has a distribution whic ...
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