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Immobilization (soil Science)
Immobilization in soil science is the conversion of inorganic compounds to organic compounds by micro-organisms or plants by which the compounds become inaccessible to plants. Immobilization is the opposite of mineralization. In immobilization, inorganic nutrients are taken up by soil microbes and become unavailable for plant uptake. Immobilization is therefore a biological process controlled by bacteria that consume inorganic nitrogen and form amino acids and biological macromolecules (organic forms). Immobilization and mineralization are continuous processes that occur concurrently whereby nitrogen of the decomposing system is steadily transformed from an inorganic to an organic state by immobilization and from an organic to an inorganic state by decay and mineralization. C:N Ratio Whether nitrogen is mineralized or immobilized depends on the C/N ratio of the plant residues. For example, incorporating materials high in carbon to nitrogen ratio such as saw dust and straw will st ...
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Soil Science
Soil science is the study of soil as a natural resource on the surface of the Earth including soil formation, classification and mapping; physical, chemical, biological, and fertility properties of soils; and these properties in relation to the use and management of soils.Jackson, J. A. (1997). Glossary of Geology (4. ed.). Alexandria, Virginia: American Geological Institute. p 604. Sometimes terms which refer to branches of soil science, such as pedology (formation, chemistry, morphology, and classification of soil) and edaphology (how soils interact with living things, especially plants), are used as if synonymous with soil science. The diversity of names associated with this discipline is related to the various associations concerned. Indeed, engineers, agronomists, chemists, geologists, physical geographers, ecologists, biologists, microbiologists, silviculturists, sanitarians, archaeologists, and specialists in regional planning, all contribute to further knowledge ...
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Micro-organisms
A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in older texts. The informal synonym ''microbe'' () comes from μικρός, mikrós, "small" and βίος, bíos, "life". is an organism of microscopic size, which may exist in its single-celled form or as a colony of cells. The possible existence of unseen microbial life was suspected from ancient times, such as in Jain scriptures from sixth century BC India. The scientific study of microorganisms began with their observation under the microscope in the 1670s by Anton van Leeuwenhoek. In the 1850s, Louis Pasteur found that microorganisms caused food spoilage, debunking the theory of spontaneous generation. In the 1880s, Robert Koch discovered that microorganisms caused the diseases tuberculosis, cholera, diphtheria, and anthrax. Because micr ...
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Plants
Plants are predominantly Photosynthesis, photosynthetic eukaryotes of the Kingdom (biology), kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all current definitions of Plantae exclude the fungi and some algae, as well as the prokaryotes (the archaea and bacteria). By one definition, plants form the clade Viridiplantae (Latin name for "green plants") which is sister of the Glaucophyte, Glaucophyta, and consists of the green algae and Embryophyte, Embryophyta (land plants). The latter includes the flowering plants, conifers and other gymnosperms, ferns and Fern ally, their allies, hornworts, liverworts, and mosses. Most plants are multicellular organisms. Green plants obtain most of their energy from sunlight via photosynthesis by primary chloroplasts that are derived from endosymbiosis with cyanobacteria. Their chloroplasts contain chlorophylls a and b, which gives them their green colo ...
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Mineralization
Mineralization may refer to: * Mineralization (biology), when an inorganic substance precipitates in an organic matrix ** Biomineralization, a form of mineralization ** Mineralization of bone, an example of mineralization ** Mineralized tissues are tissues that have undergone mineralization * Mineralization (geology), the hydrothermal deposition of economically important metals in the formation of ore bodies or lodes * Mineralization (soil science), the release of plant-available compounds such as ammonium during decomposition See also *Remineralization (other) Remineralisation (UK spelling; US Remineralization) is the transformation of organic molecules to inorganic forms. Remineralisation may also refer to: * John D. Hamaker#Remineralization benefits * Rockdust, aka soil remineralization, non-synthet ... * De- and Remineralization of teeth as an ongoing process {{disambiguation ...
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Priming (microbiology)
Priming or a "priming effect" is said to occur when something that is added to soil or compost affects the rate of decomposition occurring on the soil organic matter (SOM), either positively or negatively. Organic matter is made up mostly of carbon and nitrogen, so adding a substrate containing certain ratios of these nutrients to soil may affect the microbes that are mineralizing SOM. Fertilizers, plant litter, detritus, and carbohydrate exudates from living roots, can potentially positively or negatively prime SOM decomposition. See also * Soil carbon * Nutrient cycle * Soil chemistry * Soil biology * Environmental microbiology * Microbial biodegradation Microbial biodegradation is the use of bioremediation and biotransformation methods to harness the naturally occurring ability of microbial xenobiotic metabolism to degrade, transform or accumulate environmental pollutants, including hydrocarbons (e ... References Environmental soil science {{soil-science-stu ...
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Nitrate
Nitrate is a polyatomic ion A polyatomic ion, also known as a molecular ion, is a covalent bonded set of two or more atoms, or of a metal complex, that can be considered to behave as a single unit and that has a net charge that is not zero. The term molecule may or may no ... with the chemical formula . salt (chemistry), Salts containing this ion are called nitrates. Nitrates are common components of fertilizers and explosives. Almost all inorganic nitrates are solubility, soluble in water. An example of an insoluble nitrate is bismuth oxynitrate. Structure The ion is the conjugate acid, conjugate base of nitric acid, consisting of one central nitrogen atom surrounded by three identically bonded oxygen atoms in a trigonal planar arrangement. The nitrate ion carries a formal charge of −1. This charge results from a combination formal charge in which each of the three oxygens carries a − charge, whereas the nitrogen carries a +1 charge, all these adding up to formal c ...
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Mutualism (biology)
Mutualism describes the ecological interaction between two or more species where each species has a net benefit. Mutualism is a common type of ecological interaction. Prominent examples include most vascular plants engaged in mutualistic interactions with mycorrhizae, flowering plants being pollinated by animals, vascular plants being dispersed by animals, and corals with zooxanthellae, among many others. Mutualism can be contrasted with interspecific competition, in which each species experiences ''reduced'' fitness, and exploitation, or parasitism, in which one species benefits at the expense of the other. The term ''mutualism'' was introduced by Pierre-Joseph van Beneden in his 1876 book ''Animal Parasites and Messmates'' to mean "mutual aid among species". Mutualism is often conflated with two other types of ecological phenomena: cooperation and symbiosis. Cooperation most commonly refers to increases in fitness through within-species (intraspecific) interactions, althoug ...
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Mineralization (soil Science)
Mineralization in soil science is the decomposition (i.e., oxidation) of the chemical compounds in organic matter, by which the nutrients in those compounds are released in soluble inorganic forms that may be available to plants. Mineralization is the opposite of immobilization. Mineralization increases the bioavailability of the nutrients that were in the decomposing organic compounds, most notably, because of their quantities, nitrogen, phosphorus, and sulfur. Whether the decomposition of an organic compound will result in mineralization or immobilization is dependent on its concentration proportionate to that of the carbon in the organic matter. As a rule of thumb, if the concentration of a specific element exceeds the needs of the decomposer for biosynthesis or storage, then it will mineralize. Ratio of carbon to nitrogen Whether nitrogen mineralizes or immobilizes depends on the carbon-to-nitrogen ratio (C:N ratio) of the decomposing organic matter.R.G. McLaren & K. Cam ...
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Nitrogen Cycle
The nitrogen cycle is the biogeochemical cycle by which nitrogen is converted into multiple chemical forms as it circulates among atmospheric, terrestrial, and marine ecosystems. The conversion of nitrogen can be carried out through both biological and physical processes. Important processes in the nitrogen cycle include fixation, ammonification, nitrification, and denitrification. The majority of Earth's atmosphere (78%) is atmospheric nitrogen, making it the largest source of nitrogen. However, atmospheric nitrogen has limited availability for biological use, leading to a scarcity of usable nitrogen in many types of ecosystems. The nitrogen cycle is of particular interest to ecologists because nitrogen availability can affect the rate of key ecosystem processes, including primary production and decomposition. Human activities such as fossil fuel combustion, use of artificial nitrogen fertilizers, and release of nitrogen in wastewater have dramatically altered the global nitr ...
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Nitrification
''Nitrification'' is the biological oxidation of ammonia to nitrite followed by the oxidation of the nitrite to nitrate occurring through separate organisms or direct ammonia oxidation to nitrate in comammox bacteria. The transformation of ammonia to nitrite is usually the rate limiting step of nitrification. Nitrification is an important step in the nitrogen cycle in soil. Nitrification is an aerobic process performed by small groups of autotrophic bacteria and archaea. Microbiology Ammonia oxidation The oxidation of ammonia into nitrite (also known as nitritation) is performed by two groups of organisms, ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA). AOB AOB can be found among the Betaproteobacteria and Gammaproteobacteria. Since discovery of AOA in 2005, two isolates have been cultivated: ''Nitrosopumilus maritimus'' and ''Nitrososphaera viennensis''. In soils the most studied AOB belong to the genera ''Nitrosomonas'' and '' Nitrococcus''. AOA ...
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Soil Science
Soil science is the study of soil as a natural resource on the surface of the Earth including soil formation, classification and mapping; physical, chemical, biological, and fertility properties of soils; and these properties in relation to the use and management of soils.Jackson, J. A. (1997). Glossary of Geology (4. ed.). Alexandria, Virginia: American Geological Institute. p 604. Sometimes terms which refer to branches of soil science, such as pedology (formation, chemistry, morphology, and classification of soil) and edaphology (how soils interact with living things, especially plants), are used as if synonymous with soil science. The diversity of names associated with this discipline is related to the various associations concerned. Indeed, engineers, agronomists, chemists, geologists, physical geographers, ecologists, biologists, microbiologists, silviculturists, sanitarians, archaeologists, and specialists in regional planning, all contribute to further knowledge ...
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