Historical Biogeography
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Historical Biogeography
Phylogeography is the study of the historical processes that may be responsible for the past to present geographic distributions of genealogical lineages. This is accomplished by considering the geographic distribution of individuals in light of genetics, particularly population genetics. This term was introduced to describe geographically structured genetic signals within and among species. An explicit focus on a species' biogeography/biogeographical past sets phylogeography apart from classical population genetics and phylogenetics. Past events that can be inferred include population expansion, population bottlenecks, vicariance, dispersal, and migration. Recently developed approaches integrating coalescent theory or the genealogical history of alleles and distributional information can more accurately address the relative roles of these different historical forces in shaping current patterns. Development The term phylogeography was first used by John Avise in his 1987 work ''I ...
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Genetics
Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar working in the 19th century in Brno, was the first to study genetics scientifically. Mendel studied "trait inheritance", patterns in the way traits are handed down from parents to offspring over time. He observed that organisms (pea plants) inherit traits by way of discrete "units of inheritance". This term, still used today, is a somewhat ambiguous definition of what is referred to as a gene. Trait inheritance and molecular inheritance mechanisms of genes are still primary principles of genetics in the 21st century, but modern genetics has expanded to study the function and behavior of genes. Gene structure and function, variation, and distribution are studied within the context of the cell, the organism (e.g. dominance), and within the ...
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Geology
Geology () is a branch of natural science concerned with Earth and other astronomical objects, the features or rocks of which it is composed, and the processes by which they change over time. Modern geology significantly overlaps all other Earth sciences, including hydrology, and so is treated as one major aspect of integrated Earth system science and planetary science. Geology describes the structure of the Earth on and beneath its surface, and the processes that have shaped that structure. It also provides tools to determine the relative and absolute ages of rocks found in a given location, and also to describe the histories of those rocks. By combining these tools, geologists are able to chronicle the geological history of the Earth as a whole, and also to demonstrate the age of the Earth. Geology provides the primary evidence for plate tectonics, the evolutionary history of life, and the Earth's past climates. Geologists broadly study the properties and processes of E ...
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Crayfish
Crayfish are freshwater crustaceans belonging to the clade Astacidea, which also contains lobsters. In some locations, they are also known as crawfish, craydids, crawdaddies, crawdads, freshwater lobsters, mountain lobsters, rock lobsters, mudbugs, baybugs or yabbies. Taxonomically, they are members of the superfamilies Astacoidea and Parastacoidea. They breathe through feather-like gills. Some species are found in brooks and streams, where fresh water is running, while others thrive in swamps, ditches, and paddy fields. Most crayfish cannot tolerate polluted water, although some species, such as ''Procambarus clarkii'', are hardier. Crayfish feed on animals and plants, either living or decomposing, and detritus. The term "crayfish" is applied to saltwater species in some countries. Terminology The name "crayfish" comes from the Old French word ' (Modern French '). The word has been modified to "crayfish" by association with "fish" (folk etymology). The largely American ...
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Evolutionary Significant Unit
An evolutionarily significant unit (ESU) is a population of organisms that is considered distinct for purposes of conservation. Delineating ESUs is important when considering conservation action. This term can apply to any species, subspecies, geographic race, or population. Often the term "species" is used rather than ESU, even when an ESU is more technically considered a subspecies or variety rather than a biological species proper. In marine animals the term "stock" is often used as well. Definition Definitions of an ESU generally include at least one of the following criteria:Jeffrey Conner, Daniel Hartl. ''A Primer of Ecological Genetics''. 2004, # Current geographic separation, # Genetic differentiation at neutral markers among related ESUs caused by past restriction of gene flow, or # Locally adapted phenotypic traits caused by differences in selection. Criterion 2 considers the gene flow between populations, measured by FST. A high degree of differentiation between t ...
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Tropical Rainforest
Tropical rainforests are rainforests that occur in areas of tropical rainforest climate in which there is no dry season – all months have an average precipitation of at least 60 mm – and may also be referred to as ''lowland equatorial evergreen rainforest''. True rainforests are typically found between 10 degrees north and south of the equator (see map); they are a sub-set of the tropical forest biome that occurs roughly within the 28-degree latitudes (in the equatorial zone between the Tropic of Cancer and Tropic of Capricorn). Within the World Wildlife Fund's biome classification, tropical rainforests are a type of tropical moist broadleaf forest (or tropical wet forest) that also includes the more extensive seasonal tropical forests. Overview Tropical rainforests are characterized by two words: hot and wet. Mean monthly temperatures exceed during all months of the year. Average annual rainfall is no less than and can exceed although it typically lies betwe ...
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Arid
A region is arid when it severely lacks available water, to the extent of hindering or preventing the growth and development of plant and animal life. Regions with arid climates tend to lack vegetation and are called xeric or desertic. Most arid climates straddle the Equator; these regions include parts of Africa, Asia, South America, North America, and Australia. Change over time The distribution of aridity at any time is largely the result of the general circulation of the atmosphere. The latter does change significantly over time through climate change. For example, temperature increase by 1.5–2.1 percent across the Nile Basin over the next 30–40 years could change the region from semi-arid to arid, significantly reducing the land usable for agriculture. In addition, changes in land use can increase demands on soil water and thereby increase aridity. See also * Arid Forest Research Institute * Aridity index * Desert climate * Desiccation tolerance * Drought * Hu ...
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Genetics (journal)
''Genetics'' is a monthly scientific journal publishing investigations bearing on heredity, genetics, biochemistry and molecular biology. Genetics is published by the Genetics Society of America. It has a delayed open access policy, and makes articles available online without a subscription after 12 months have elapsed since first publication. Since 2010, it is published online-only.http://www.councilscienceeditors.org/wp-content/uploads/v36n1p14-15_17.pdf George Harrison Shull George Harrison Shull (April 15, 1874 – September 28, 1954) was an eminent American plant geneticist and the younger brother of botanical illustrator and plant breeder J. Marion Shull. He was born on a farm in Clark County, Ohio, graduated fr ... was the founding editor of ''Genetics'' in 1916. Editors-in-Chief References External linksOfficial website Genetics journals Delayed open access journals English-language journals Publications established in 1916 Online-only journals {{ge ...
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Alan Templeton
Alan R. Templeton is an American geneticist and Statistics#Specialized disciplines, statistician at Washington University in St. Louis, where he is the Charles Rebstock emeritus professor of biology. From 2010 to 2019, he held positions in the Institute of Evolution and the Department of Evolutionary and Environmental Biology at the University of Haifa. He is known for his work demonstrating the degree of genetic diversity among humans and, in his opinion, the biological unreality of human Race (classification of human beings), races. Research In 2002, Templeton published a genetic analysis showing that some gene variants that are present in modern populations existed already in Asia hundreds of thousands of years ago. This meant that even if our male line (Y chromosome) and our female line (mitochondrial DNA) came out of Africa in the last 100,000 years or so, we have inherited other genes from populations that were already outside of Africa. Since this study other studies have b ...
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Statistical
Statistics (from German: ''Statistik'', "description of a state, a country") is the discipline that concerns the collection, organization, analysis, interpretation, and presentation of data. In applying statistics to a scientific, industrial, or social problem, it is conventional to begin with a statistical population or a statistical model to be studied. Populations can be diverse groups of people or objects such as "all people living in a country" or "every atom composing a crystal". Statistics deals with every aspect of data, including the planning of data collection in terms of the design of surveys and experiments.Dodge, Y. (2006) ''The Oxford Dictionary of Statistical Terms'', Oxford University Press. When census data cannot be collected, statisticians collect data by developing specific experiment designs and survey samples. Representative sampling assures that inferences and conclusions can reasonably extend from the sample to the population as a whole. An experim ...
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DNA Sequencing
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid speed of sequencing attained with modern D ...
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Capillary
A capillary is a small blood vessel from 5 to 10 micrometres (μm) in diameter. Capillaries are composed of only the tunica intima, consisting of a thin wall of simple squamous endothelial cells. They are the smallest blood vessels in the body: they convey blood between the arterioles and venules. These microvessels are the site of exchange of many substances with the interstitial fluid surrounding them. Substances which cross capillaries include water, oxygen, carbon dioxide, urea, glucose, uric acid, lactic acid and creatinine. Lymph capillaries connect with larger lymph vessels to drain lymphatic fluid collected in the microcirculation. During early embryonic development, new capillaries are formed through vasculogenesis, the process of blood vessel formation that occurs through a '' de novo'' production of endothelial cells that then form vascular tubes. The term '' angiogenesis'' denotes the formation of new capillaries from pre-existing blood vessels and already present ...
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Polymerase Chain Reaction
The polymerase chain reaction (PCR) is a method widely used to rapidly make millions to billions of copies (complete or partial) of a specific DNA sample, allowing scientists to take a very small sample of DNA and amplify it (or a part of it) to a large enough amount to study in detail. PCR was invented in 1983 by the American biochemist Kary Mullis at Cetus Corporation; Mullis and biochemist Michael Smith (chemist), Michael Smith, who had developed other essential ways of manipulating DNA, were jointly awarded the Nobel Prize in Chemistry in 1993. PCR is fundamental to many of the procedures used in genetic testing and research, including analysis of Ancient DNA, ancient samples of DNA and identification of infectious agents. Using PCR, copies of very small amounts of DNA sequences are exponentially amplified in a series of cycles of temperature changes. PCR is now a common and often indispensable technique used in medical laboratory research for a broad variety of applications ...
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