Haploblepharus Fuscus
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Haploblepharus Fuscus
The brown shyshark or plain happy (''Haploblepharus fuscus'') is a species of catshark, part of the family Scyliorhinidae. It is endemic to the shallow, coastal waters of South Africa from west of Cape Agulhas to KwaZulu-Natal. This benthic species is usually found over sandy or rocky bottoms. Measuring up to long, the brown shyshark is stoutly built, with a broad, flattened head and rounded snout. Unlike other shysharks, the brown shyshark has a plain brown color, though some individuals have faint "saddle" markings or light or dark spots. When threatened, this shark curls into a circle with its tail over its eyes, which is the origin of the name "shyshark". It feeds on bony fishes and lobsters, and is oviparous with females laying pairs of egg capsules. The International Union for Conservation of Nature (IUCN) has assessed this harmless species as Vulnerable. It is of no commercial or recreational interest, but its limited distribution makes its entire population vulnerable to ...
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James Smith (ichthyologist)
James Leonard Brierley Smith (26 September 1897 – 8 January 1968) was a South African ichthyology, ichthyologist, organic chemist, and university professor. He was the first to identify a taxidermied fish as a coelacanth, at the time thought to be long extinct. Early life Born in Graaff-Reinet, 26 September 1897, Smith was the elder of two sons of Joseph Smith and his wife, Emily Ann Beck. Educated at country schools at Noupoort, De Aar, and Aliwal North, he finally Matriculation in South Africa, matriculated in 1914 from the Diocesan College, Rondebosch. He obtained a Bachelor of Arts degree in chemistry from the University of the Cape of Good Hope in 1916 and a Master of Science degree in chemistry at Stellenbosch University in 1918. Smith went to the United Kingdom, where he received his PhD at Cambridge University in 1922. After returning to South Africa, he became senior lecturer and later an associate professor of organic chemistry at Rhodes University in Grahamstown. F ...
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James Leonard Brierley Smith
James Leonard Brierley Smith (26 September 1897 – 8 January 1968) was a South African ichthyologist, organic chemist, and university professor. He was the first to identify a taxidermied fish as a coelacanth, at the time thought to be long extinct. Early life Born in Graaff-Reinet, 26 September 1897, Smith was the elder of two sons of Joseph Smith and his wife, Emily Ann Beck. Educated at country schools at Noupoort, De Aar, and Aliwal North, he finally matriculated in 1914 from the Diocesan College, Rondebosch. He obtained a Bachelor of Arts degree in chemistry from the University of the Cape of Good Hope in 1916 and a Master of Science degree in chemistry at Stellenbosch University in 1918. Smith went to the United Kingdom, where he received his PhD at Cambridge University in 1922. After returning to South Africa, he became senior lecturer and later an associate professor of organic chemistry at Rhodes University in Grahamstown. From 1922 to 1937, he was married to Henriet ...
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Puffadder Shyshark
The puffadder shyshark (''Haploblepharus edwardsii''), also known as the Happy Eddie, is a species of catshark, belonging to the family Scyliorhinidae, endemic to the temperate waters off the coast of South Africa. This common shark is found on or near the bottom in sandy or rocky habitats, from the intertidal zone to a depth of . Typically reaching in length, the puffadder shyshark has a slender, flattened body and head. It is strikingly patterned with a series of dark-edged, bright orange "saddles" and numerous small white spots over its back. The Natal shyshark (''H. kistnasamyi''), formally described in 2006, was once considered to be an alternate form of the puffadder shyshark. When threatened, the puffadder shyshark (and other members of its genus) curls into a circle with its tail covering its eyes, giving rise to the local names "shyshark" and "doughnut". It is a predator that feeds mainly on crustaceans, polychaete worms, and small bony fishes. This shark is oviparous ...
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Basal (phylogenetics)
In phylogenetics, basal is the direction of the ''base'' (or root) of a phylogenetic tree#Rooted tree, rooted phylogenetic tree or cladogram. The term may be more strictly applied only to nodes adjacent to the root, or more loosely applied to nodes regarded as being close to the root. Note that extant taxa that lie on branches connecting directly to the root are not more closely related to the root than any other extant taxa. While there must always be two or more equally "basal" clades sprouting from the root of every cladogram, those clades may differ widely in taxonomic rank, Phylogenetic diversity, species diversity, or both. If ''C'' is a basal clade within ''D'' that has the lowest rank of all basal clades within ''D'', ''C'' may be described as ''the'' basal taxon of that rank within ''D''. The concept of a 'key innovation' implies some degree of correlation between evolutionary innovation and cladogenesis, diversification. However, such a correlation does not make a given ca ...
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Genus
Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus comes above species and below family (taxonomy), family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants ...
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Derived (phylogenetics)
In phylogenetics, a primitive (or ancestral) character, trait, or feature of a lineage or taxon is one that is inherited from the common ancestor of a clade (or clade group) and has undergone little change since. Conversely, a trait that appears ''within'' the clade group (that is, is present in any subgroup within the clade but not all) is called advanced or derived. A clade is a group of organisms that consists of a common ancestor and all its lineal descendants. A primitive trait is the original condition of that trait in the common ancestor; advanced indicates a notable change from the original condition. These terms in biology contain no judgement about the sophistication, superiority, value or adaptiveness of the named trait. "Primitive" in biology means only that the character appeared first in the common ancestor of a clade group and has been passed on largely intact to more recent members of the clade. "Advanced" means the character has evolved within a later subgroup ...
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Sister Species
In phylogenetics, a sister group or sister taxon, also called an adelphotaxon, comprises the closest relative(s) of another given unit in an evolutionary tree. Definition The expression is most easily illustrated by a cladogram: Taxon A and taxon B are sister groups to each other. Taxa A and B, together with any other extant or extinct descendants of their most recent common ancestor (MRCA), form a monophyletic group, the clade AB. Clade AB and taxon C are also sister groups. Taxa A, B, and C, together with all other descendants of their MRCA form the clade ABC. The whole clade ABC is itself a subtree of a larger tree which offers yet more sister group relationships, both among the leaves and among larger, more deeply rooted clades. The tree structure shown connects through its root to the rest of the universal tree of life. In cladistic standards, taxa A, B, and C may represent specimens, species, genera, or any other taxonomic units. If A and B are at the same taxonomic ...
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Dark Shyshark
The dark shyshark or pretty happy (''Haploblepharus pictus'') is a species of catshark, belonging to the family Scyliorhinidae, endemic to the temperate waters off southern Namibia and western South Africa. It is benthic in nature and inhabits shallow, inshore waters and favors rocky reefs and kelp forests. Growing to long, this small, stocky shark has a wide, flattened head with a rounded snout and a large flap of skin extending from before the nostrils to the mouth. Its dorsal coloration is extremely variable and may feature black-edged orange to blackish saddles and/or white spots on a light brown to nearly black background. When threatened, the dark shyshark curls into a ring with its tail covering its eyes, hence the name "shyshark". It preys mainly on small crustaceans, bony fishes, and molluscs. Reproduction is oviparous and proceeds throughout the year. Females lay two egg cases at a time, which hatch after 6–10 months. This harmless species is of little commerc ...
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Gene
In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." meaning ''generation'' or ''birth'' or ''gender'') can have several different meanings. The Mendelian gene is a basic unit of heredity and the molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protein-coding genes and noncoding genes. During gene expression, the DNA is first copied into RNA. The RNA can be directly functional or be the intermediate template for a protein that performs a function. The transmission of genes to an organism's offspring is the basis of the inheritance of phenotypic traits. These genes make up different DNA sequences called genotypes. Genotypes along with environmental and developmental factors determine what the phenotypes will be. Most biological traits are under the influence of polygenes (many different genes) as well as gen ...
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Mitochondrial DNA
Mitochondrial DNA (mtDNA or mDNA) is the DNA located in mitochondria, cellular organelles within eukaryotic cells that convert chemical energy from food into a form that cells can use, such as adenosine triphosphate (ATP). Mitochondrial DNA is only a small portion of the DNA in a eukaryotic cell; most of the DNA can be found in the cell nucleus and, in plants and algae, also in plastids such as chloroplasts. Human mitochondrial DNA was the first significant part of the human genome to be sequenced. This sequencing revealed that the human mtDNA includes 16,569 base pairs and encodes 13 proteins. Since animal mtDNA evolves faster than nuclear genetic markers, it represents a mainstay of phylogenetics and evolutionary biology. It also permits an examination of the relatedness of populations, and so has become important in anthropology and biogeography. Origin Nuclear and mitochondrial DNA are thought to be of separate evolutionary origin, with the mtDNA being derived ...
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Molecular Phylogeny
Molecular phylogenetics () is the branch of phylogeny that analyzes genetic, hereditary molecular differences, predominantly in DNA sequences, to gain information on an organism's evolutionary relationships. From these analyses, it is possible to determine the processes by which diversity among species has been achieved. The result of a molecular phylogenetic analysis is expressed in a phylogenetic tree. Molecular phylogenetics is one aspect of molecular systematics, a broader term that also includes the use of molecular data in taxonomy and biogeography. Molecular phylogenetics and molecular evolution correlate. Molecular evolution is the process of selective changes (mutations) at a molecular level (genes, proteins, etc.) throughout various branches in the tree of life (evolution). Molecular phylogenetics makes inferences of the evolutionary relationships that arise due to molecular evolution and results in the construction of a phylogenetic tree. History The theoretical framew ...
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East London, South Africa
East London ( xh, eMonti; af, Oos-Londen) is a city on the southeast coast of South Africa in the Buffalo City Metropolitan Municipality of the Eastern Cape province. The city lies on the Indian Ocean coast, largely between the Buffalo River and the Nahoon River, and hosts the country's only river port. , East London had a population of over 267,000 with over 755,000 in the metropolitan area. History Early history John Bailie, one of the 1820 Settlers, surveyed the Buffalo River mouth and founded the town in 1836. There is a memorial on Signal Hill commemorating the event. The city formed around the only river port in South Africa and was originally known as Port Rex. Later it was renamed London in honour of the capital city of the United Kingdom, hence the name East London. This settlement on the West Bank was the nucleus of the town of East London, which was elevated to city status in 1914. During the early to mid-19th century frontier wars between the British settler ...
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