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Facultative Biotroph
{{wiktionary, facultative Facultative means "optional" or "discretionary" (antonym '' obligate''), used mainly in biology in phrases such as: * Facultative (FAC), facultative wetland (FACW), or facultative upland (FACU): wetland indicator statuses for plants * Facultative anaerobe, an organism that can use oxygen but also has anaerobic methods of energy production. It can survive in either environment * Facultative biotroph, an organism, often a fungus, that can live as a saprotroph but also form mutualisms with other organisms at different times of its life cycle. * Facultative biped, an animal that is capable of walking or running on two legs as well as walking or running on four limbs or more, as appropriate * Facultative carnivore, a carnivore that does not depend solely on animal flesh for food but also can subsist on non-animal food. Compare this with the term omnivore * Facultative heterochromatin, tightly packed but non-repetitive DNA in the form of Heterochromatin, but whi ...
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Obligate
{{wiktionary, obligate As an adjective, obligate means "by necessity" (antonym ''facultative'') and is used mainly in biology in phrases such as: * Obligate aerobe, an organism that cannot survive without oxygen * Obligate anaerobe, an organism that cannot survive in the presence of oxygen * Obligate air-breather, a term used in fish physiology to describe those that respire entirely from the atmosphere * Obligate biped, Bipedalism designed to walk on two legs * Obligate carnivore, an organism dependent for survival on a diet of animal flesh. * Obligate hibernation, a state of inactivity in which some organisms survive conditions of insufficiently available resources. * Obligate intracellular parasite, a parasitic microorganism that cannot reproduce without entering a suitable host cell * Obligate parasite, a parasite that cannot reproduce without exploiting a suitable host * Obligate photoperiodic plant, a plant that requires sufficiently long or short nights before it initiates flo ...
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Transcription (genetics)
Transcription is the process of copying a segment of DNA into RNA. The segments of DNA transcribed into RNA molecules that can encode proteins are said to produce messenger RNA (mRNA). Other segments of DNA are copied into RNA molecules called non-coding RNAs (ncRNAs). mRNA comprises only 1–3% of total RNA samples. Less than 2% of the human genome can be transcribed into mRNA ( Human genome#Coding vs. noncoding DNA), while at least 80% of mammalian genomic DNA can be actively transcribed (in one or more types of cells), with the majority of this 80% considered to be ncRNA. Both DNA and RNA are nucleic acids, which use base pairs of nucleotides as a complementary language. During transcription, a DNA sequence is read by an RNA polymerase, which produces a complementary, antiparallel RNA strand called a primary transcript. Transcription proceeds in the following general steps: # RNA polymerase, together with one or more general transcription factors, binds to promoter DNA ...
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Obligate
{{wiktionary, obligate As an adjective, obligate means "by necessity" (antonym ''facultative'') and is used mainly in biology in phrases such as: * Obligate aerobe, an organism that cannot survive without oxygen * Obligate anaerobe, an organism that cannot survive in the presence of oxygen * Obligate air-breather, a term used in fish physiology to describe those that respire entirely from the atmosphere * Obligate biped, Bipedalism designed to walk on two legs * Obligate carnivore, an organism dependent for survival on a diet of animal flesh. * Obligate hibernation, a state of inactivity in which some organisms survive conditions of insufficiently available resources. * Obligate intracellular parasite, a parasitic microorganism that cannot reproduce without entering a suitable host cell * Obligate parasite, a parasite that cannot reproduce without exploiting a suitable host * Obligate photoperiodic plant, a plant that requires sufficiently long or short nights before it initiates flo ...
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Facultative Virus
{{wiktionary, facultative Facultative means "optional" or "discretionary" (antonym '' obligate''), used mainly in biology in phrases such as: * Facultative (FAC), facultative wetland (FACW), or facultative upland (FACU): wetland indicator statuses for plants * Facultative anaerobe, an organism that can use oxygen but also has anaerobic methods of energy production. It can survive in either environment * Facultative biotroph, an organism, often a fungus, that can live as a saprotroph but also form mutualisms with other organisms at different times of its life cycle. * Facultative biped, an animal that is capable of walking or running on two legs as well as walking or running on four limbs or more, as appropriate * Facultative carnivore, a carnivore that does not depend solely on animal flesh for food but also can subsist on non-animal food. Compare this with the term omnivore * Facultative heterochromatin, tightly packed but non-repetitive DNA in the form of Heterochromatin, but whi ...
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Facultative Saprophyte
Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi (for example ''Mucor'') and soil bacteria. Saprotrophic microscopic fungi are sometimes called saprobes; saprotrophic plants or bacterial flora are called saprophytes ( sapro- 'rotten material' + -phyte 'plant'), although it is now believed that all plants previously thought to be saprotrophic are in fact parasites of microscopic fungi or other plants. The process is most often facilitated through the active transport of such materials through endocytosis within the internal mycelium and its constituent hyphae. states the purpose of saprotrophs and their internal nutrition, as well as the main two types of fungi that are most often referred to, as well as describes, visually, the process of saprotrophic nutrition through a diagram of hyph ...
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Photoperiodic Plant
Photoperiodism is the physiological reaction of organisms to the length of night or a dark period. It occurs in plants and animals. Plant photoperiodism can also be defined as the developmental responses of plants to the relative lengths of light and dark periods. They are classified under three groups according to the photoperiods: short-day plants, long-day plants, and day-neutral plants. Plants Many flowering plants (angiosperms) use a photoreceptor protein, such as phytochrome or cryptochrome, to sense seasonal changes in night length, or photoperiod, which they take as signals to flower. In a further subdivision, ''obligate'' photoperiodic plants absolutely require a long or short enough night before flowering, whereas ''facultative'' photoperiodic plants are more likely to flower under one condition. Phytochrome comes in two forms: Pr and Pfr. Red light (which is present during the day) converts phytochrome to its active form (pfr). This then triggers the plant to grow. ...
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Parasite
Parasitism is a close relationship between species, where one organism, the parasite, lives on or inside another organism, the host, causing it some harm, and is adapted structurally to this way of life. The entomologist E. O. Wilson has characterised parasites as "predators that eat prey in units of less than one". Parasites include single-celled protozoans such as the agents of malaria, sleeping sickness, and amoebic dysentery; animals such as hookworms, lice, mosquitoes, and vampire bats; fungi such as Armillaria mellea, honey fungus and the agents of ringworm; and plants such as mistletoe, dodder, and the Orobanchaceae, broomrapes. There are six major parasitic Behavioral ecology#Evolutionarily stable strategy, strategies of exploitation of animal hosts, namely parasitic castration, directly transmitted parasitism (by contact), wikt:trophic, trophicallytransmitted parasitism (by being eaten), Disease vector, vector-transmitted parasitism, parasitoidism, and micropreda ...
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Facultative Parasite
A facultative parasite is an organism that may resort to parasitic activity, but does not absolutely rely on any host for completion of its life cycle. Examples of facultative parasitism occur among many species of fungi, such as family members of the genus ''Armillaria''. ''Armillaria'' species do parasitise living trees, but if the tree dies, whether as a consequence of the fungal infection or not, the fungus continues to eat the wood without further need for parasitic activity; some species even can ingest dead wood without any parasitic activity at all. As such, although they also are important ecological agents in the process of nutrient recycling by microbial decomposition, the fungi become pests in their role as destructive agents of wood rot. Similarly, green plants in genera such as ''Rhinanthus'' and ''Osyris'' can grow independently of any host, but they also act opportunistically as facultative root parasites of neighboring green plants. Among animals, facultatively ...
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Wastewater
Wastewater is water generated after the use of freshwater, raw water, drinking water or saline water in a variety of deliberate applications or processes. Another definition of wastewater is "Used water from any combination of domestic, industrial, commercial or agricultural activities, surface runoff / storm water, and any sewer inflow or sewer infiltration". In everyday usage, wastewater is commonly a synonym for sewage (also called sewerage, domestic wastewater, or municipal wastewater), which is wastewater that is produced by a community of people. As a generic term wastewater may also be used to describe water containing contaminants accumulated in other settings, such as: * Industrial wastewater: waterborne waste generated from a variety of industrial processes, such as manufacturing operations, mineral extraction, power generation, or water and wastewater treatment. ** Cooling water, released with potential thermal pollution after use to condense steam or reduce machi ...
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Stabilization Pond
Waste stabilization ponds (WSPs or stabilization ponds or waste stabilization lagoons) are ponds designed and built for wastewater treatment to reduce the organic content and remove pathogens from wastewater. They are man-made depressions confined by earthen structures. Wastewater or "influent" enters on one side of the waste stabilization pond and exits on the other side as "effluent", after spending several days in the pond, during which treatment processes take place. Waste stabilization ponds are used worldwide for wastewater treatment and are especially suitable for developing countries that have warm climates. They are frequently used to treat sewage and industrial effluents, but may also be used for treatment of municipal run-off or stormwater. The system may consist of a single pond or several ponds in a series, each pond playing a different role in the removal of pollutants. After treatment, the effluent may be returned to surface water or reused as irrigation water (o ...
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Facultative Lagoon
Facultative lagoons are a type of waste stabilization pond used for biological treatment of industrial and domestic wastewater. Sewage or organic waste from food or fiber processing may be catabolized in a system of constructed ponds where adequate space is available to provide an average waste retention time exceeding a month. A series of ponds prevents mixing of untreated waste with treated wastewater and allows better control of waste residence time for uniform treatment efficiency. Fundamentals First pond The facultative lagoon in the pond sequence functions like the primary clarifier of a conventional sewage treatment system. Heavy solids will settle to the bottom of the lagoon, and lighter solids will float. This facultative lagoon lacks the sludge removal capability of a primary clarifier, so a population of anaerobic organisms will colonize accumulated sludge on the bottom of the lagoon. The surface area of the lagoon should be large enough to provide an atmospheric ...
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Heterochromatin
Heterochromatin is a tightly packed form of DNA or '' condensed DNA'', which comes in multiple varieties. These varieties lie on a continue between the two extremes of constitutive heterochromatin and facultative heterochromatin. Both play a role in the expression of genes. Because it is tightly packed, it was thought to be inaccessible to polymerases and therefore not transcribed; however, according to Volpe et al. (2002), and many other papers since, much of this DNA is in fact transcribed, but it is continuously turned over via RNA-induced transcriptional silencing (RITS). Recent studies with electron microscopy and OsO4 staining reveal that the dense packing is not due to the chromatin. Constitutive heterochromatin can affect the genes near itself (e.g. position-effect variegation). It is usually repetitive and forms structural functions such as centromeres or telomeres, in addition to acting as an attractor for other gene-expression or repression signals. Facultative hete ...
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