Endozoicomonas Numazuensis
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Endozoicomonas Numazuensis
''Endozoicomonas numazuensis'' is a rod-shaped, facultatively anaerobic and non-motile bacterium from the genus of ''Endozoicomonas'' which has been isolated from a marine sponge from Numazu is a city located in eastern Shizuoka Prefecture, Japan. , the city had an estimated population of 189,486 in 91,986 households, and a population density of 1,014 persons per km2. The total area of the city is . Geography Numazu is at the nor ... in Japan. References Oceanospirillales Bacteria described in 2013 {{Oceanospirillales-stub ...
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Bacteria
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationsh ...
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Pseudomonadota
Pseudomonadota (synonym Proteobacteria) is a major phylum of Gram-negative bacteria. The renaming of phyla in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as ''Escherichia'', '' Salmonella'', ''Vibrio'', ''Yersinia'', ''Legionella'', and many others.Slonczewski JL, Foster JW, Foster E. Microbiology: An Evolving Science 5th Ed. WW Norton & Company; 2020. Others are free-living (nonparasitic) and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was later informally named Proteobacteria, after Proteus, a Greek god of the sea capable of assuming many different shapes (not after the Proteobacteria genus ''Proteus''). In 2021 the Internat ...
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Gammaproteobacteria
Gammaproteobacteria is a class of bacteria in the phylum Pseudomonadota (synonym Proteobacteria). It contains about 250 genera, which makes it the most genera-rich taxon of the Prokaryotes. Several medically, ecologically, and scientifically important groups of bacteria belong to this class. It is composed by all Gram-negative microbes and is the most phylogenetically and physiologically diverse class of Proteobacteria. These microorganisms can live in several terrestrial and marine environments, in which they play various important roles, including ''extreme environments'' such as hydrothermal vents. They generally have different shapes - rods, curved rods, cocci, spirilla, and filaments and include free living bacteria, biofilm formers, commensals and symbionts, some also have the distinctive trait of being bioluminescent. Metabolisms found in the different genera are very different; there are both aerobic and anaerobic (obligate or facultative) species, chemolithoautotrophic ...
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Oceanospirillales
The Oceanospirillales are an order of Pseudomonadota with ten families. Description Bacteria in the ''Oceanospirillales'' are metabolically and morphologically diverse, with some able to grow in the presence of oxygen and others requiring an anaerobic environment. Members of the ''Oceanospirillales'' can be halotolerant or halophilic and require high salt concentrations to grow. While they grow in diverse niches, all ''Oceanospirillales'' derive their energy from the breakdown of various organic products. Bacteria in the ''Oceanospirillales'' are motile except for those in the genus ''Alcanivorax''. Bacteria in the ''Oceanospirillales'' include hydrocarbon-degrading groups such as ''Oleispira antarctica'', ''Thalassolituus oleivorans'', and ''Oleiphilus messinensis'' , which were found in the indigenous microbial community in deep waters after the Deepwater Horizon oil spill in 2010. They are also common members of bacterial communities in the water column of the hadal The ...
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Hahellaceae
The ''Hahellaceae'' are a family of Pseudomonadota in the order of Oceanospirillales The Oceanospirillales are an order of Pseudomonadota with ten families. Description Bacteria in the ''Oceanospirillales'' are metabolically and morphologically diverse, with some able to grow in the presence of oxygen and others requiring an an .... References Further reading * Oceanospirillales {{Oceanospirillales-stub ...
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Endozoicomonas
''Endozoicomonas'' is a genus of Gram-negative, aerobic or facultatively anaerobic, chemoorganotrophic, rod-shaped, marine bacteria from the family of Hahellaceae. ''Endozoicomonas'' are symbionts of marine animals. Scientific History The genus was firstly proposed in 2007 after isolating an unknown Gammaproteobacteria from the sea slug ''Elysia ornata''. Called '' E. numazuensis,'' it was the first of many diverse species now known, and was collected from seawater off the coast of Izu-Miyake Island, Japan, at a depth of 15 m. Many new species have been identified after this: * In 2010, researchers from different Asian universities isolated '' E. montiporae'' from the encrustating pores of coral species ''Montipora aequituberculata,'' in Taiwan, and a scientific team of the University of Queensland, Australia, discovered many unidentified Gammaproteobacteria symbionts were closely related to ''Endozoicomonas'' as well during that same year. * More or less in the same period ...
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LPSN
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Prokaryotes The International Code of Nomenclature of Prokaryotes (ICNP) formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC) governs the scientific names for Bacteria and Archaea.P. H. A. Sneath, 2003. A short hist .... The database was curated from 1997 to June 2013 by Jean P. Euzéby. From July 2013 to January 2020, LPSN was curated by Aidan C. Parte. In February 2020, a new version of LPSN was published as a service of the Leibniz Institute DSMZ, thereby also integrating the Prokaryotic Nomenclature Up-to-date service. References External links List of Prokaryotic names with Standing in Nomenclature
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Rod-shaped
A bacillus (), also called a bacilliform bacterium or often just a rod (when the context makes the sense clear), is a rod-shaped bacterium or archaeon. Bacilli are found in many different taxonomic groups of bacteria. However, the name ''Bacillus'', capitalized and italicized, refers to a specific genus of bacteria. The name Bacilli, capitalized but not italicized, can also refer to a less specific taxonomic group of bacteria that includes two orders, one of which contains the genus ''Bacillus''. When the word is formatted with lowercase and not italicized, 'bacillus', it will most likely be referring to shape and not to the genus at all. Bacilliform bacteria are also often simply called rods when the bacteriologic context is clear. Bacilli usually divide in the same plane and are solitary, but can combine to form diplobacilli, streptobacilli, and palisades. * Diplobacilli: Two bacilli arranged side by side with each other. * Streptobacilli: Bacilli arranged in chains. * Coccobac ...
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Facultative Aerobic Organism
A facultative anaerobic organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent. Some examples of facultatively anaerobic bacteria are ''Staphylococcus'' spp., ''Escherichia coli'', ''Salmonella'', ''Listeria'' spp., ''Shewanella oneidensis'' and ''Yersinia pestis''. Certain eukaryotes are also facultative anaerobes, including fungi such as ''Saccharomyces cerevisiae'' and many aquatic invertebrates such as nereid polychaetes. See also * Aerobic respiration * Anaerobic respiration * Fermentation * Obligate aerobe * Obligate anaerobe * Microaerophile A microaerophile is a microorganism that requires environments containing lower levels of dioxygen than that are present in the atmosphere (i.e. < 21% O2; typically 2–10% O2) for optimal growth. A more re ...


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Numazu
is a city located in eastern Shizuoka Prefecture, Japan. , the city had an estimated population of 189,486 in 91,986 households, and a population density of 1,014 persons per km2. The total area of the city is . Geography Numazu is at the northwestern end of the Izu Peninsula, which is a leisure destination known for its numerous hot springs. Mount Fuji, Japan's tallest mountain, may also be seen from Numazu on clear days. Numazu is located west of Tokyo and is on the Tōkaidō Main Line, the main railway line from Osaka to Tokyo. Warmed by the Kuroshio Current, the area enjoys a warm maritime climate with hot, humid summers and mild, cool winters. The Kano River runs through the middle of the city. Mount Ashitaka (1188 meters) is the highest point in the city Neighboring municipalities Shizuoka Prefecture *Mishima *Fuji *Izu *Izunokuni * Shimizu *Nagaizumi *Kannami Demographics Per Japanese census data, the population of Numazu has been in slow decline over the past 30 year ...
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Japan
Japan ( ja, 日本, or , and formally , ''Nihonkoku'') is an island country in East Asia. It is situated in the northwest Pacific Ocean, and is bordered on the west by the Sea of Japan, while extending from the Sea of Okhotsk in the north toward the East China Sea, Philippine Sea, and Taiwan in the south. Japan is a part of the Ring of Fire, and spans Japanese archipelago, an archipelago of List of islands of Japan, 6852 islands covering ; the five main islands are Hokkaido, Honshu (the "mainland"), Shikoku, Kyushu, and Okinawa Island, Okinawa. Tokyo is the Capital of Japan, nation's capital and largest city, followed by Yokohama, Osaka, Nagoya, Sapporo, Fukuoka, Kobe, and Kyoto. Japan is the List of countries and dependencies by population, eleventh most populous country in the world, as well as one of the List of countries and dependencies by population density, most densely populated and Urbanization by country, urbanized. About three-fourths of Geography of Japan, the c ...
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