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Erysipelotrichi
The Erysipelotrichia are a class of bacteria of the phylum Bacillota. Species of this class are known to be common in the gut microbiome, as they have been isolated from swine manure and increase in composition of the mouse gut microbiome for mice switched to diets high in fat. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) ♦ Paraphyletic Erysipelotrichia See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are ... References External links The Taxonomicon: Class ''Erysipelotrichi'' {{Taxonbar, from=Q5396370 Bacteria classes ...
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Erysipelotrichia
The Erysipelotrichia are a class of bacteria of the phylum Bacillota. Species of this class are known to be common in the gut microbiome, as they have been isolated from swine manure and increase in composition of the mouse gut microbiome for mice switched to diets high in fat. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) ♦ Paraphyletic Erysipelotrichia See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are ... References External links The Taxonomicon: Class ''Erysipelotrichi'' {{Taxonbar, from=Q5396370 Bacteria classes ...
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Erysipelotrichales
The Erysipelotrichia are a class of bacteria of the phylum Bacillota. Species of this class are known to be common in the gut microbiome, as they have been isolated from swine manure and increase in composition of the mouse gut microbiome for mice switched to diets high in fat. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) ♦ Paraphyletic Erysipelotrichia See also * List of bacterial orders * List of bacteria genera This article lists the genera of the bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI). However many taxonomic names are ... References External links The Taxonomicon: Class ''Erysipelotrichi'' {{Taxonbar, from=Q5396370 Bacteria classes ...
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Mollicutes
Mollicutes is a class of bacteria distinguished by the absence of a cell wall. The word "Mollicutes" is derived from the Latin ''mollis'' (meaning "soft" or "pliable"), and ''cutis'' (meaning "skin"). Individuals are very small, typically only 0.2–0.3 μm (200-300 nm) in size and have a very small genome size. They vary in form, although most have sterols that make the cell membrane somewhat more rigid. Many are able to move about through gliding, but members of the genus ''Spiroplasma'' are helical and move by twisting. The best-known genus in the Mollicutes is ''Mycoplasma''. Colonies show the typical "fried-egg" appearance. Mollicutes are parasites of various animals and plants, living on or in the host's cells. Many cause diseases in humans, attaching to cells in the respiratory or urogenital tracts, particularly species of ''Mycoplasma'' and ''Ureaplasma''. Phytoplasma and ''Spiroplasma'' are plant pathogens associated with insect vectors. Whereas formerly the trivial n ...
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Bacillota
The Bacillota (synonym Firmicutes) are a phylum of bacteria, most of which have gram-positive cell wall structure. The renaming of phyla such as Firmicutes in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature. The name "Firmicutes" was derived from the Latin words for "tough skin," referring to the thick cell wall typical of bacteria in this phylum. Scientists once classified the Firmicutes to include all gram-positive bacteria, but have recently defined them to be of a core group of related forms called the low- G+C group, in contrast to the Actinomycetota. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus). A few Firmicutes, such as ''Megasphaera'', ''Pectinatus'', ''Selenomonas'' and ''Zymophilus'', have a porous pseudo-outer membrane that causes them to stain gram-negative. Many Bacillota (Firmicutes) produce endospores, which are resistant to desiccation and can ...
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Bacilli
Bacilli is a taxonomic class of bacteria that includes two orders, Bacillales and Lactobacillales, which contain several well-known pathogens such as ''Bacillus anthracis'' (the cause of anthrax). ''Bacilli'' are almost exclusively gram-positive bacteria. The name ''Bacillus'', capitalized and italicized, refers to a specific genus of bacteria. The name Bacilli, capitalized but not italicized, can also refer to a less specific taxonomic group of bacteria that includes two orders, one of which contains the genus ''Bacillus''. When the word is formatted with lowercase and not italicized, 'bacillus', it will most likely be referring to shape and not to the genus at all. Ambiguity Several related concepts make use of similar words, and the ambiguity can create considerable confusion. The term "''Bacillus''" (capitalized and italicized) is also the name of a genus (''Bacillus anthracis'') that, among many other genera, falls within the class Bacilli. The word "bacillus" (or its plur ...
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List Of Bacterial Orders
This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S rRNA-based LTP release 132 by The All-Species Living Tree Project. Phylogeny National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups. Cladogram was taken from GTDB release 07-RS207 (8th April 2022). Clade Terrabacteria Phylum Chloroflexota * Class ?"Bathosphaeria" Mehrshad ...
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Erysipelotrichaceae
The Erysipelotrichaceae are a family of Gram-positive bacteria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) See also * List of bacteria genera * List of bacterial orders This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI) and the phylogeny is based on 16S ... References Erysipelotrichia Bacteria families {{Bacilli-stub ...
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Turicibacter
''Turicibacter'' is a genus in the Bacillota phylum of bacteria that has most commonly been found in the guts of animals. The genus is named after the city in which it was first isolated, Zurich (Latin = Turicum), Switzerland. Phylogeny The position of ''Turicibacter'' within the Bacillota could not be resolved using 16S rRNA gene-based analyses. However, it was tentatively placed in the class Bacilli, then the class Erysipelotrichia. In a tree built using a concatenated protein alignment containing data from two draft ''Turicibacter'' genomes, the group was placed at the base of the class Bacilli Bacilli is a taxonomic class of bacteria that includes two orders, Bacillales and Lactobacillales, which contain several well-known pathogens such as ''Bacillus anthracis'' (the cause of anthrax). ''Bacilli'' are almost exclusively gram-positi .... Later analyses that also included amino acid sequences predicted by a complete ''Turicibacter'' genome came to the same conclusion. ...
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Coprobacillaceae
The Coprobacillaceae are a family of Bacillota. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ... (NCBI) References Erysipelotrichales Bacteria families {{Firmicutes-stub ...
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Turicibacteraceae
''Turicibacter'' is a genus in the Bacillota phylum of bacteria that has most commonly been found in the guts of animals. The genus is named after the city in which it was first isolated, Zurich (Latin = Turicum), Switzerland. Phylogeny The position of ''Turicibacter'' within the Bacillota could not be resolved using 16S rRNA gene-based analyses. However, it was tentatively placed in the class Bacilli, then the class Erysipelotrichia. In a tree built using a concatenated protein alignment containing data from two draft ''Turicibacter'' genomes, the group was placed at the base of the class Bacilli Bacilli is a taxonomic class of bacteria that includes two orders, Bacillales and Lactobacillales, which contain several well-known pathogens such as ''Bacillus anthracis'' (the cause of anthrax). ''Bacilli'' are almost exclusively gram-positi .... Later analyses that also included amino acid sequences predicted by a complete ''Turicibacter'' genome came to the same conclusion. ...
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Genome Taxonomy Database
The Genome Taxonomy Database (GTDB) is an online database that maintains information on a proposed nomenclature of prokaryotes, following a phylogenomic approach based on a set of conserved single-copy proteins. In addition to breaking up paraphyletic groups, this method also reassigns taxonomic ranks algorithmically, creating new names in both cases. Information for archaea was added in 2020, along with a species classification based on average nucleotide identity. Each update incorporates new genomes as well as human adjustments to the taxonomy. An open-source tool called GTDB-Tk is available to classify draft genomes into the GTDB hierarchy. The GTDB system, via GTDB-Tk, has been used to catalogue not-yet-named bacteria in the human gut microbiome and other metagenomic sources. The GTDB is incorporated into the ''Bergey's Manual of Systematics of Archaea and Bacteria'' in 2019 as its phylogenomic resource. See also * PhyloCode * National Center for Biotechnology Informa ...
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Anaeroplasmatales
Anaeroplasmatales is an order of mollicute bacteria which are generally found in the rumens of cattle and sheep. The only family in the order is the family Anaeroplasmataceae. Description Members of the order Anaeroplasmatales can appear as different shapes at different times in their lifecycles. Cells which are 16–18 hours old tend to be spherical. When the cells are older, they can take on various shapes. Anaeroplasmatales are not motile. Anaeroplasmatales cannot grow in the presence of oxygen. They do grow at a temperature of 37 °C on microbiological media, where they form irregular-shaped colonies with a "fried-egg" appearance, similar to other mycoplasmas. Anaeroplasmatales are negative by Gram stain. History The order Anaeroplasmatales was created in 1987 to encompass the family Anaeroplasmataceae which itself was created to hold the anaerobic mycoplasmas '' Anaeroplasma'' and '' Asteroleplasma''. Phylogeny The currently accepted taxonomy is based on the List o ...
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