Deinococcus–Thermus
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Deinococcus–Thermus
''Deinococcota'' (synonym, ''Deinococcus-Thermus'') is a phylum of bacteria with a single class, ''Deinococci'', that are highly resistant to environmental hazards, also known as extremophiles. These bacteria have thick cell walls that give them gram-positive stains, but they include a second membrane and so are closer in structure to those of gram-negative bacteria. Taxonomy The phylum ''Deinococcota'' consists of a single class (''Deinococci'') and two orders: * The ''Deinococcales'' include two families (''Deinococcaceae'' and'' Trueperaceae''), with three genera, ''Deinococcus'', ''Deinobacterium'' and ''Truepera''.Garrity GM, Holt JG. (2001) Phylum BIV. "Deinococcus–Thermus". In: Bergey’s manual of systematic bacteriology, pp. 395-420. Eds D. R. Boone, R. W. Castenholz. Springer-: New York.Garrity GM, Bell JA, Lilburn TG. (2005) Phylum BIV. The revised road map to the Manual. In: Bergey’s manual of systematic bacteriology, pp. 159-220. Eds Brenner DJ, Krieg NR, Stal ...
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Deinococcales
''Deinococcota'' (synonym, ''Deinococcus-Thermus'') is a phylum of bacteria with a single class, ''Deinococci'', that are highly resistant to environmental hazards, also known as extremophiles. These bacteria have thick cell walls that give them gram-positive stains, but they include a second membrane and so are closer in structure to those of gram-negative bacteria. Taxonomy The phylum ''Deinococcota'' consists of a single class (''Deinococci'') and two orders: * The ''Deinococcales'' include two families (''Deinococcaceae'' and'' Trueperaceae''), with three genera, ''Deinococcus'', ''Deinobacterium'' and ''Truepera''.Garrity GM, Holt JG. (2001) Phylum BIV. "Deinococcus–Thermus". In: Bergey’s manual of systematic bacteriology, pp. 395-420. Eds D. R. Boone, R. W. Castenholz. Springer-: New York.Garrity GM, Bell JA, Lilburn TG. (2005) Phylum BIV. The revised road map to the Manual. In: Bergey’s manual of systematic bacteriology, pp. 159-220. Eds Brenner DJ, Krieg NR, Stal ...
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Deinococci
''Deinococcota'' (synonym, ''Deinococcus-Thermus'') is a phylum of bacteria with a single class, ''Deinococci'', that are highly resistant to environmental hazards, also known as extremophiles. These bacteria have thick cell walls that give them gram-positive stains, but they include a second membrane and so are closer in structure to those of gram-negative bacteria. Taxonomy The phylum ''Deinococcota'' consists of a single class ('' Deinococci'') and two orders: * The '' Deinococcales'' include two families ('' Deinococcaceae'' and'' Trueperaceae''), with three genera, ''Deinococcus'', '' Deinobacterium'' and '' Truepera''.Garrity GM, Holt JG. (2001) Phylum BIV. "Deinococcus–Thermus". In: Bergey’s manual of systematic bacteriology, pp. 395-420. Eds D. R. Boone, R. W. Castenholz. Springer-: New York.Garrity GM, Bell JA, Lilburn TG. (2005) Phylum BIV. The revised road map to the Manual. In: Bergey’s manual of systematic bacteriology, pp. 159-220. Eds Brenner DJ, Krieg NR, ...
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Thermus
''Thermus'' is a genus of thermophilic bacteria. It is one of several bacteria belonging to the '' Deinococcota'' phylum. ''Thermus'' species can be distinguished from other genera in the family ''Thermaceae'' as well as all other bacteria by the presence of eight conserved signature indels (CSIs) found in proteins such as adenylate kinase and replicative DNA helicase as well as 14 conserved signature proteins (CSPs) that are exclusively shared by members of this genus. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and the National Center for Biotechnology Information (NCBI). Unassigned species: * "'' T. anatoliensis''" Kacagan et al. 2016 * "'' T. caldophilus''" Taguchi et al. 1983 * "'' T. eggertssonii''" Peters 2008 * "'' T. murrieta''" Benner et al. 2006 * "'' T. nonproteolyticus''" 1992 * "'' T. rehai''" Lin et al. 2002 * "'' T. yunnanensis''" Gong et al. 2005 See also * Bacteria * ...
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Deinococcaceae
''Deinococcus'' (from the el, δεινός, ''deinos'', "dreadful, strange" and κόκκος, ''kókkos'', "granule") is in the monotypic family Deinococcaceae, and one genus of three in the order Deinococcales of the bacterial phylum '' Deinococcota'' highly resistant to environmental hazards. These bacteria have thick cell walls that give them Gram-positive stains, but they include a second membrane and so are closer in structure to Gram-negative bacteria. ''Deinococcus'' survive when their DNA is exposed to high doses of gamma and UV radiation. Whereas other bacteria change their structure in the presence of radiation, such as by forming endospores, ''Deinococcus'' tolerate it without changing their cellular form and do not retreat into a hardened structure. They are also characterized by the presence of the carotenoid pigment deinoxanthin that give them their pink color. They are usually isolated according to these two criteria. In August 2020, scientists reported that ba ...
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Truepera Radiovictrix
''Truepera'' is one genus of bacteria in the family '' Trueperaceae'' from the phylum '' Deinococcota''. The following points accounts for its characteristics: * These strains form orange/red colonies and have spherical-shaped cells. * Optimum growth temperature of about 50 °C. * Optimum pH for growth between about 7.5 and 9.5, and do not grow at pH below 6.5 or above pH 11.2. * They are extremely resistant to ionizing radiation. For instance up to 60% of the cells can survive even after being exposed to 5.0 kGy * These strains are chemo-organotrophic and aerobic; do not grow in ''Thermus'' medium under anaerobic conditions with or without nitrate as electron acceptor and glucose as a source of carbon and energy, but ferment glucose to d-lactate without formation of gas. They assimilate a large variety of sugars, organic acids and amino acids. * Species: ''Truepera radiovictrix.'' The sole species of this genus, ''Truepera radiovictrix,'' can be distinguished from other ...
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Truepera
''Truepera'' is one genus of bacteria in the family '' Trueperaceae'' from the phylum '' Deinococcota''. The following points accounts for its characteristics: * These strains form orange/red colonies and have spherical-shaped cells. * Optimum growth temperature of about 50 °C. * Optimum pH for growth between about 7.5 and 9.5, and do not grow at pH below 6.5 or above pH 11.2. * They are extremely resistant to ionizing radiation. For instance up to 60% of the cells can survive even after being exposed to 5.0 kGy * These strains are chemo-organotrophic and aerobic; do not grow in ''Thermus'' medium under anaerobic conditions with or without nitrate as electron acceptor and glucose as a source of carbon and energy, but ferment glucose to d-lactate without formation of gas. They assimilate a large variety of sugars, organic acids and amino acids. * Species: ''Truepera radiovictrix.'' The sole species of this genus, ''Truepera radiovictrix,'' can be distinguished from other ...
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Deinococcus
''Deinococcus'' (from the el, δεινός, ''deinos'', "dreadful, strange" and κόκκος, ''kókkos'', "granule") is in the monotypic family Deinococcaceae, and one genus of three in the order Deinococcales of the bacterial phylum ''Deinococcota'' highly resistant to environmental hazards. These bacteria have thick cell walls that give them Gram-positive stains, but they include a second membrane and so are closer in structure to Gram-negative bacteria. ''Deinococcus'' survive when their DNA is exposed to high doses of gamma and UV radiation. Whereas other bacteria change their structure in the presence of radiation, such as by forming endospores, ''Deinococcus'' tolerate it without changing their cellular form and do not retreat into a hardened structure. They are also characterized by the presence of the carotenoid pigment deinoxanthin that give them their pink color. They are usually isolated according to these two criteria. In August 2020, scientists reported that bacteri ...
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Truepera Species
''Truepera'' is one genus of bacteria in the family '' Trueperaceae'' from the phylum '' Deinococcota''. The following points accounts for its characteristics: * These strains form orange/red colonies and have spherical-shaped cells. * Optimum growth temperature of about 50 °C. * Optimum pH for growth between about 7.5 and 9.5, and do not grow at pH below 6.5 or above pH 11.2. * They are extremely resistant to ionizing radiation. For instance up to 60% of the cells can survive even after being exposed to 5.0 kGy * These strains are chemo-organotrophic and aerobic; do not grow in ''Thermus'' medium under anaerobic conditions with or without nitrate as electron acceptor and glucose as a source of carbon and energy, but ferment glucose to d-lactate without formation of gas. They assimilate a large variety of sugars, organic acids and amino acids. * Species: ''Truepera radiovictrix.'' The sole species of this genus, ''Truepera radiovictrix,'' can be distinguished from other ...
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Extremophiles
An extremophile (from Latin ' meaning "extreme" and Greek ' () meaning "love") is an organism that is able to live (or in some cases thrive) in extreme environments, i.e. environments that make survival challenging such as due to extreme temperature, radiation, salinity, or pH level. These organisms are ecologically dominant in the evolutionary history of the planet. Some spores and cocooned bacteria samples have been dormant for more than 40 million years, extremophiles have continued to thrive in the most extreme conditions, making them one of the most abundant lifeforms. Characteristics In the 1980s and 1990s, biologists found that microbial life has great flexibility for surviving in extreme environments—niches that are acidic, extraordinarily hot or within irregular air pressure for example—that would be completely inhospitable to complex organisms. Some scientists even concluded that life may have begun on Earth in hydrothermal vents far under the ocean's surfa ...
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Excinuclease
Excision endonuclease, also known as excinuclease or UV-specific endonuclease, is a nuclease (enzyme) which excises a fragment of nucleotides during DNA repair. The excinuclease cuts out a fragment by hydrolyzing two phosphodiester bonds, one on either side of the lesion in the DNA. This process is part of "nucleotide excision repair", a mechanism that can fix specific types of damage to the DNA in the G1 phase of the eukaryotic cell cycle. Such damage may include thymine dimers created by UV rays as well as the bulky distortions in DNA caused by oxidized benzopyrenes from sources such as cigarette smoke. A deficiency of excinuclease occurs in a rare autosomal recessive disease called xeroderma pigmentosum. This disease can cause light-skin, extreme freckling and facial lesions, as well as preventing the repair of pyrimidine dimers. Diagnosis of this disease is done by measuring the enzyme's level in white blood cells in a blood sample. Symptoms in children include extreme UV s ...
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Thermophile
A thermophile is an organism—a type of extremophile—that thrives at relatively high temperatures, between . Many thermophiles are archaea, though they can be bacteria or fungi. Thermophilic eubacteria are suggested to have been among the earliest bacteria. Thermophiles are found in various geothermally heated regions of the Earth, such as hot springs like those in Yellowstone National Park (see image) and deep sea hydrothermal vents, as well as decaying plant matter, such as peat bogs and compost. Thermophiles can survive at high temperatures, whereas other bacteria or archaea would be damaged and sometimes killed if exposed to the same temperatures. The enzymes in thermophiles function at high temperatures. Some of these enzymes are used in molecular biology, for example the ''Taq'' polymerase used in PCR. "Thermophile" is derived from the el, θερμότητα (''thermotita''), meaning heat, and el, φίλια (''philia''), love. Classification Thermophiles can be c ...
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