Rhodocyclaceae
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Rhodocyclaceae
The ''Rhodocyclaceae'' are a family of gram-negative bacteria.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . They are given their own order in the beta subgroup of Pseudomonadota, and include many genera previously assigned to the family ''Pseudomonadaceae''. The family was revised in 2017 with the creation of other families within the order ''Rhodocyclales'', and the family now contains the genera: *'' Rhodocyclus'' (type genus) species can grow photoheterotrophically or photoautotrophically (using molecular hydrogen as their electron donor) under anoxia or heterotrophically on fatty acids under air. Dominant respiratory quinone is rhodoquinone-8. Cells are curved rods or rings. *'' Propionivibrio'' species grow anaerobically by fermentation of hydrocarbons, yielding f ...
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Rhodocyclaceae
The ''Rhodocyclaceae'' are a family of gram-negative bacteria.Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . They are given their own order in the beta subgroup of Pseudomonadota, and include many genera previously assigned to the family ''Pseudomonadaceae''. The family was revised in 2017 with the creation of other families within the order ''Rhodocyclales'', and the family now contains the genera: *'' Rhodocyclus'' (type genus) species can grow photoheterotrophically or photoautotrophically (using molecular hydrogen as their electron donor) under anoxia or heterotrophically on fatty acids under air. Dominant respiratory quinone is rhodoquinone-8. Cells are curved rods or rings. *'' Propionivibrio'' species grow anaerobically by fermentation of hydrocarbons, yielding f ...
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Propionivibrio
''Propionivibrio'' is a genus of gram-negative, chemoorganotrophic, non-spore-forming bacteria from the family of Rhodocyclaceae which belongs to the class of Betaproteobacteria Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Togeth .... References Bacteria genera Rhodocyclaceae {{Betaproteobacteria-stub ...
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Rhodocyclus
''Rhodocyclus'' is a genus of gram-negative bacteria from the family of Rhodocyclaceae which belongs to the class of Betaproteobacteria Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Togeth .... References Bacteria genera Rhodocyclaceae {{Betaproteobacteria-stub ...
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Rhodocyclales
The ''Rhodocyclales'' are an order of the class ''Betaproteobacteria'' in the phylum "'' Pseudomonadota''".Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. (eds.) (2005). Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. New York, New York: Springer. . Following a major reclassification of the class in 2017, the previously monofamilial order was split into three families: *'' Rhodocyclaceae'' ( type family) contains the genera '' Rhodocyclus'' (type genus), '' Azospira'' and '' Propionivibrio''. Cells are curved rods, rings or spirillae. Dominant respiratory quinones are menaquinone-8, ubiquinone-8 and rhodoquinone-8. G+C fractions are 61.6 - 65.3 mol%. *'' Azonexaceae'' contains the genera '' Azonexus'' (type genus), '' Dechloromonas'', '' Ferribacterium'' and '' Quatrionicoccus''. Cells are curved rods or cocci. Dominant respiratory quinone is ubiquinone-8. ...
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Azospira
''Azospira'' is a genus in the phylum Pseudomonadota (Bacteria). It has two members, namely '' Azospira oryzae'' and '' Azospira restricta''. See also * Bacterial taxonomy * Microbiology Microbiology () is the scientific study of microorganisms, those being unicellular (single cell), multicellular (cell colony), or acellular (lacking cells). Microbiology encompasses numerous sub-disciplines including virology, bacteriology, prot ... References Bacteria genera Rhodocyclaceae {{Betaproteobacteria-stub ...
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Azoarcus
''Azoarcus'' is a genus of nitrogen-fixing bacteria. Species in this genus are usually found in contaminated water, as they are involved in the degradation of some contaminants, commonly inhabiting soil. These bacteria have also been found growing in the endophytic compartment (inside the plant between the living cells) of some rice species and other grasses. The genus is within the family '' Zoogloeaceae'' in the ''Rhodocyclales'' of the ''Betaproteobacteria''. Many studies reported this genus about its potential extracellular electron uptake metabolism and has been found in the cathodic part of many microbial fuel cell Microbial fuel cell (MFC) is a type of bioelectrochemical fuel cell system that generates electric current by diverting electrons produced from the microbial oxidation of reduced compounds (also known as fuel or electron donor) on the anode to oxid ...s, notably in nitrate and oxygen reducing bio-cathodes biofilms. References Further reading * *Whitman, Will ...
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Aromatoleum
"Aromatoleum" is a genus of bacteria capable of microbial biodegradation of organic pollutants. It has one single described species member, ''A. aromaticum'', for which the only strain is strain EbN1. This taxonomy is accepted by the NCBI taxonomy database, and consequently by many bioinformatic databases. However, it the strain EbN1 has not been described in detail, therefore, according to the International Code of Nomenclature of Bacteria, the name "Aromatoleum aromaticum" is not valid and should be officially referred to as ''Azoarcus'' sp. EbN1 as it belongs to the ''Azoarcus''/''Thauera'' cluster. The discovery of the strain was published in 1995, and was subsequently referred to in the literature as "Aromatoleum aromaticum" and cited as "(Rabus, unpublished data)". ''A. aromaticum'' strain EbN1 has been fully sequenced by the same researchers who discovered it and coworkers. It has one chromosome and two plasmids, encoding for 10 anaerobic and 4 aerobic aromatic degradatio ...
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Rhodoquinone
Rhodoquinone (RQ) is a modified ubiquinone-like molecule that is an important cofactor used in anaerobic energy metabolism by many organisms. Recently, it has gained attention as a potential anthelmintic Anthelmintics or antihelminthics are a group of antiparasitic drugs that expel parasitic worms (helminths) and other internal parasites from the body by either stunning or killing them and without causing significant damage to the host. They may a ... drug target due to the fact that parasitic hosts do not synthesize or use this cofactor. Because this cofactor is used in low oxygen environments, many helminth-like organisms have adapted to survive host environments such as the areas within the gastrointestinal tracks. Biosynthesis Currently the biosynthesis of rhodoquinone (RQ) is still being debated, but there are two main biosynthetic pathways that are being researched. The first pathway requires the organism to produce ubiquinone (UQ) before the amino group can be added ...
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Spiral Bacteria
Spiral bacteria, bacteria of spiral (helical) shape, form the third major morphological category of prokaryotes along with the rod-shaped bacilli and round cocci. Spiral bacteria can be subclassified by the number of twists per cell, cell thickness, cell flexibility, and motility. The two types of spiral cells are spirillum and spirochete, with spirillum being rigid with external flagella, and spirochetes being with internal flagella. Spirillum A spirillum (plural spirilla) is a rigid spiral bacterium that is Gram-negative and frequently has external amphitrichous or lophotrichous flagella. Examples include: * Members of the genus ''Spirillum'' * '' Campylobacter'' species, such as ''Campylobacter jejuni'', a foodborne pathogen that causes campylobacteriosis * ''Helicobacter'' species, such as ''Helicobacter pylori'', a cause of peptic ulcers Spirochetes A spirochete (plural spirochetes) is a very thin, elongate, flexible, spiral bacteria that is motile via internal peripla ...
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Diazotroph
Diazotrophs are bacteria and archaea that fix gaseous nitrogen in the atmosphere into a more usable form such as ammonia. A diazotroph is a microorganism that is able to grow without external sources of fixed nitrogen. Examples of organisms that do this are rhizobia and ''Frankia'' (in symbiosis) and ''Azospirillum''. All diazotrophs contain iron-molybdenum or iron-vanadium nitrogenase systems. Two of the most studied systems are those of ''Klebsiella pneumoniae'' and ''Azotobacter vinelandii''. These systems are studied because of their genetic tractability and their fast growth. Etymology The word diazotroph is derived from the words ''diazo'' ("di" = two + "azo" = nitrogen) meaning "dinitrogen (N2)" and ''troph'' meaning "pertaining to food or nourishment", in summary dinitrogen utilizing. The word ''azote'' means nitrogen in French and was named by French chemist and biologist Antoine Lavoisier, who saw it as the part of air which cannot sustain life. Types of diazotrophs Diaz ...
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Coenzyme Q10
Coenzyme Q, also known as ubiquinone and marketed as CoQ10, is a coenzyme family that is ubiquitous in animals and most bacteria (hence the name ubiquinone). In humans, the most common form is coenzyme Q10 or ubiquinone-10. It is a 1,4-benzoquinone, where Q refers to the quinone chemical group and 10 refers to the number of isoprenyl chemical subunits in its tail. In natural ubiquinones, the number can be anywhere from 6 to 10. This family of fat-soluble substances, which resemble vitamins, is present in all respiring eukaryotic cells, primarily in the mitochondria. It is a component of the electron transport chain and participates in aerobic cellular respiration, which generates energy in the form of ATP. Ninety-five percent of the human body's energy is generated this way. Organs with the highest energy requirements—such as the heart, liver, and kidney—have the highest CoQ10 concentrations. There are three redox states of CoQ: fully oxidized (ubiquinone), semiquinone ...
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Propionate
Propionic acid (, from the Greek words πρῶτος : ''prōtos'', meaning "first", and πίων : ''píōn'', meaning "fat"; also known as propanoic acid) is a naturally occurring carboxylic acid with chemical formula CH3CH2CO2H. It is a liquid with a pungent and unpleasant smell somewhat resembling body odor. The anion CH3CH2CO2− as well as the salts and esters of propionic acid are known as propionates or propanoates. History Propionic acid was first described in 1844 by Johann Gottlieb, who found it among the degradation products of sugar. Over the next few years, other chemists produced propionic acid by different means, none of them realizing they were producing the same substance. In 1847, French chemist Jean-Baptiste Dumas established all the acids to be the same compound, which he called propionic acid, from the Greek words πρῶτος (prōtos), meaning ''first'', and πίων (piōn), meaning ''fat'', because it is the smallest H(CH2)''n''COOH acid that exhibit ...
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