Iole (genus)
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Iole (genus)
''Iole'' is a genus of songbirds in the bulbul family, Pycnonotidae. They are native to tropical eastern Asia, from India to China and south through Southeast Asia to northern Indonesia. Taxonomy and systematics While some older sources merge this genus into ''Hypsipetes'', this is neither advisable nor technically correct. The two genera stand well apart, and to phylogenetically justify their merging, the entire "''Hypsipetes'' group" of bulbuls would need to be united in a single genus. That would include ''Hemixos'', ''Ixos'', '' Microscelis'' and '' Tricholestes'', and probably also ''Alophoixus'' and the monotypic '' Setornis''. The hook-billed bulbul may in fact be the closest living relative to the species in ''Iole'', but altogether the present genus may well be a quite basal lineage of the traditional "''Hypsipetes'' group" of bulbuls, with no particularly close relatives among any of these other genera.Gregory (2000), Pasquet ''et al.'' (2001), Moyle & Marks (2006) Acc ...
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Buff-vented Bulbul
The buff-vented bulbul (''Iole crypta'') is a species of songbird in the bulbul family, Pycnonotidae. It is found in south-eastern Myanmar, south-western Thailand, on the Malay Peninsula, Sumatra and nearby islands. Its natural habitat is subtropical or tropical moist lowland forests. It is threatened by habitat loss. Taxonomy and systematics The former scientific name, ''Iole olivacea'' Blyth, 1844, has now been ruled as permanently invalid by the IOC. Some authorities have classified the buff-vented bulbul in the genera ''Hypsipetes'' and '' Microscelis''. Formerly, Charlotte's bulbul was considered as conspecific with the buff-vented bulbul until split by the IOC The International Olympic Committee (IOC; french: link=no, Comité international olympique, ''CIO'') is a non-governmental sports organisation based in Lausanne, Switzerland. It is constituted in the form of an association under the Swiss ... in 2017. Alternate names for the buff-vented bulbul include the c ...
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Basal (evolution)
In phylogenetics, basal is the direction of the ''base'' (or root) of a rooted phylogenetic tree or cladogram. The term may be more strictly applied only to nodes adjacent to the root, or more loosely applied to nodes regarded as being close to the root. Note that extant taxa that lie on branches connecting directly to the root are not more closely related to the root than any other extant taxa. While there must always be two or more equally "basal" clades sprouting from the root of every cladogram, those clades may differ widely in taxonomic rank, species diversity, or both. If ''C'' is a basal clade within ''D'' that has the lowest rank of all basal clades within ''D'', ''C'' may be described as ''the'' basal taxon of that rank within ''D''. The concept of a ' key innovation' implies some degree of correlation between evolutionary innovation and diversification. However, such a correlation does not make a given case predicable, so ancestral characters should not be imputed to th ...
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Finsch's Bulbul
Finsch's bulbul (''Iole finschii'') is a species of songbird in the bulbul family, Pycnonotidae. It is found on the Malay Peninsula, Sumatra, and Borneo. Its natural habitat is subtropical or tropical moist lowland forests. It is threatened by habitat loss. Taxonomy and systematics Finsch's bulbul was originally described in the genus ''Criniger'', moved to the genus ''Alophoixus'' in 2009, and to genus ''Iole'' in 2020. Alternate names for Finsch's bulbul include the dwarf bearded bulbul, dwarf bulbul and Finsch's bearded bulbul. The common name and scientific name commemorate the German ethnographer, naturalist and colonial explorer Friedrich Hermann Otto Finsch. References Finsch's bulbul Birds of Malesia Finsch's bulbul Finsch's bulbul (''Iole finschii'') is a species of songbird in the bulbul family, Pycnonotidae. It is found on the Malay Peninsula, Sumatra, and Borneo. Its natural habitat is subtropical or tropical moist lowland forests. It is threatened by h ... ...
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Species
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. However, only about 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomial". The first part of a binomial is the genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes i ...
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Wastebin Taxon
Wastebasket taxon (also called a wastebin taxon, dustbin taxon or catch-all taxon) is a term used by some taxonomists to refer to a taxon that has the sole purpose of classifying organisms that do not fit anywhere else. They are typically defined by either their designated members' often superficial similarity to each other, or their ''lack'' of one or more distinct character states or by their ''not'' belonging to one or more other taxa. Wastebasket taxa are by definition either paraphyletic or polyphyletic, and are therefore not considered valid taxa under strict cladistic rules of taxonomy. The name of a wastebasket taxon may in some cases be retained as the designation of an evolutionary grade, however. The term was coined in a 1985 essay by Steven Jay Gould. Examples There are many examples of paraphyletic groups, but true "wastebasket" taxa are those that are known not to, and perhaps not intended to, represent natural groups, but are nevertheless used as convenient group ...
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Genus Name
Genus ( plural genera ) is a taxonomic rank used in the biological classification of living and fossil organisms as well as viruses. In the hierarchy of biological classification, genus comes above species and below family. In binomial nomenclature, the genus name forms the first part of the binomial species name for each species within the genus. :E.g. ''Panthera leo'' (lion) and ''Panthera onca'' (jaguar) are two species within the genus ''Panthera''. ''Panthera'' is a genus within the family Felidae. The composition of a genus is determined by taxonomy (biology), taxonomists. The standards for genus classification are not strictly codified, so different authorities often produce different classifications for genera. There are some general practices used, however, including the idea that a newly defined genus should fulfill these three criteria to be descriptively useful: # monophyly – all descendants of an ancestral taxon are grouped together (i.e. Phylogenetics, phylogenet ...
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MT-RNR2
Mitochondrially encoded 16S RNA (often abbreviated as ''16S'') is the mitochondrial large subunit ribosomal RNA that in humans is encoded by the MT-RNR2 gene. The MT-RNR2 gene also encodes the Humanin polypeptide that has been the target of Alzheimer's disease research. The 16S rRNA is the mitochondrial homologue of the prokaryotic 23S and eukaryotic nuclear 28S ribosomal RNAs. See also * Mitochondrial DNA * Humanin Humanin is a micropeptide encoded in the mitochondrial genome by the 16S ribosomal RNA gene, MT-RNR2. Its structure contains a three-turn α-helix, and no symmetry. In ''in vitro'' and animal models, it appears to have cytoprotective effects. ... References Ribosomal RNA Human mitochondrial genes {{genetics-stub ...
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12S RRNA
Mitochondrially encoded 12S ribosomal RNA (often abbreviated as 12S or 12S rRNA), also known as Mitochondrial-derived peptide MOTS-c or Mitochondrial open reading frame of the 12S rRNA-c is the SSU rRNA of the mitochondrial ribosome. In humans, 12S is encoded by the ''MT-RNR1'' gene and is 959 nucleotides long. MT-RNR1 is one of the 37 genes contained in animal mitochondria genomes. Their 2 rRNA, 22 tRNA and 13 mRNA genes are very useful in phylogenetic studies, in particular the 12S and 16S rRNAs. The 12S rRNA is the mitochondrial homologue of the prokaryotic 16S and eukaryotic nuclear 18S ribosomal RNAs. Mutations in the MT-RNR1 gene may be associated with hearing loss. Structure The ''MT-RNR1'' gene is located on the p arm of the mitochondrial DNA at position 12 and it spans 953 base pairs. Function The ''MT-RNR1'' gene encodes for a protein responsible for regulating insulin sensitivity and metabolic homeostasis. The protein acts as an inhibitor of the folate cycle ...
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DNA Sequence
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid speed of sequencing attained with modern D ...
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Intron
An intron is any nucleotide sequence within a gene that is not expressed or operative in the final RNA product. The word ''intron'' is derived from the term ''intragenic region'', i.e. a region inside a gene."The notion of the cistron .e., gene... must be replaced by that of a transcription unit containing regions which will be lost from the mature messenger – which I suggest we call introns (for intragenic regions) – alternating with regions which will be expressed – exons." (Gilbert 1978) The term ''intron'' refers to both the DNA sequence within a gene and the corresponding RNA sequence in RNA transcripts. The non-intron sequences that become joined by this RNA processing to form the mature RNA are called exons. Introns are found in the genes of most organisms and many viruses and they can be located in both protein-coding genes and genes that function as RNA (noncoding genes). There are four main types of introns: tRNA introns, group I introns, group II introns, and ...
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β-fibrinogen
Fibrinogen beta chain, also known as FGB, is a gene found in humans and most other vertebrates with a similar system of blood coagulation. The protein encoded by this gene is the beta component of fibrinogen, a blood-borne glycoprotein composed of three pairs of nonidentical polypeptide chains. Following vascular injury, fibrinogen is cleaved by thrombin to form fibrin which is the most abundant component of blood clots. In addition, various cleavage products of fibrinogen and fibrin regulate cell adhesion and spreading, display vasoconstrictor and chemotactic activities, and are mitogens for several cell types. Mutations in this gene lead to several disorders, including afibrinogenemia, dysfibrinogenemia, hypodysfibrinogenemia and thrombotic tendency. Interactions Fibrinogen beta chain has been shown to interact with Lipoprotein(a). See also * Fibrin *Fibrinogen alpha chain *Fibrinogen gamma chain Fibrinogen gamma chain, also known as fibrinogen gamma gene (FGG), is a human ge ...
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NDNA
Nuclear DNA (nDNA), or nuclear deoxyribonucleic acid, is the DNA contained within each cell nucleus of a eukaryotic organism. It encodes for the majority of the genome in eukaryotes, with mitochondrial DNA and plastid DNA coding for the rest. It adheres to Mendelian inheritance, with information coming from two parents, one male and one female—rather than matrilineally (through the mother) as in mitochondrial DNA. Structure Nuclear DNA is a nucleic acid, a polymeric biomolecule or biopolymer, found in the nucleus of eukaryotic cells. Its structure is a double helix, with two strands wound around each other, a structure first described by Francis Crick and James D. Watson (1953) using data collected by Rosalind Franklin. Each strand is a long polymer chain of repeating nucleotides. Each nucleotide is composed of a five-carbon sugar, a phosphate group, and an organic base. Nucleotides are distinguished by their bases: purines, large bases that include adenine and guanine; and pyr ...
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