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Bythinella Reyniesii
''Bythinella reyniesii'' is a species of very small freshwater snail, an Aquatic animal, aquatic gastropod mollusk in the family Amnicolidae. Distribution These snails live in spring (hydrosphere), springs. They were long believed to occur only in Andorra, List of non-marine molluscs of Austria, Austria, and parts of List of non-marine molluscs of France, France. This disjunct distribution was puzzling, until it was realized that the populations assigned to several other supposedly distinct species actually seem to all belong to one species. In fact, ''Bythinella reyniesii'' is probably widespread from western List of non-marine molluscs of Germany, Germany and nearby Belgium through central and eastern France to Andorra.Bichain J.-M.. Gaubert P., Samadi S. & Boisselier-Dubayle M.-C. (2007). "A gleam in the dark: Phylogenetic species delimitation in the confusing spring-snail genus ''Bythinella'' Moquin-Tandon, 1856 (Gastropoda: Rissooidea: Amnicolidae)". ''Molecular Phylogenet ...
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Holotype
A holotype is a single physical example (or illustration) of an organism, known to have been used when the species (or lower-ranked taxon) was formally described. It is either the single such physical example (or illustration) or one of several examples, but explicitly designated as the holotype. Under the International Code of Zoological Nomenclature (ICZN), a holotype is one of several kinds of name-bearing types. In the International Code of Nomenclature for algae, fungi, and plants (ICN) and ICZN, the definitions of types are similar in intent but not identical in terminology or underlying concept. For example, the holotype for the butterfly '' Plebejus idas longinus'' is a preserved specimen of that subspecies, held by the Museum of Comparative Zoology at Harvard University. In botany, an isotype is a duplicate of the holotype, where holotype and isotypes are often pieces from the same individual plant or samples from the same gathering. A holotype is not necessarily "typ ...
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Cylindrical
A cylinder (from ) has traditionally been a three-dimensional solid, one of the most basic of curvilinear geometric shapes. In elementary geometry, it is considered a prism with a circle as its base. A cylinder may also be defined as an infinite curvilinear surface in various modern branches of geometry and topology. The shift in the basic meaning—solid versus surface (as in ball and sphere)—has created some ambiguity with terminology. The two concepts may be distinguished by referring to solid cylinders and cylindrical surfaces. In the literature the unadorned term cylinder could refer to either of these or to an even more specialized object, the ''right circular cylinder''. Types The definitions and results in this section are taken from the 1913 text ''Plane and Solid Geometry'' by George Wentworth and David Eugene Smith . A ' is a surface consisting of all the points on all the lines which are parallel to a given line and which pass through a fixed plane curve in a pla ...
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Bythinella
''Bythinella'' is a genus of very small freshwater snails, an aquatic gastropod mollusk in the family Bythinellidae (according to the taxonomy of the Gastropoda by Bouchet & Rocroi, 2005). These gonochoristic snails are small animals, with a shell length of about 2–4 mm.Bichain ''et al.'' (2007) ''Amnicola'' is a close relative, containing North American snails with essentially similar appearance and ecology. The scientific name means "small ''Bithynia''"; the latter snail genus is somewhat similar at a casual glance (though much larger) but not at all closely related among the Rissooidea. Distribution The present genus occurs in springs, and sometimes caves or groundwater, from Catalonia across central Europe to the Aegean Region of Turkey. In and around France a particularly high diversity of these snails is found. Due to the limited range and special and easily destroyed habitat, these snails are liable to become endangered species. Species More than 80 species ...
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Vulnerable Species
A vulnerable species is a species which has been Conservation status, categorized by the International Union for Conservation of Nature as being threatened species, threatened with extinction unless the circumstances that are threatened species, threatening its survival and reproduction improve. Vulnerability is mainly caused by habitat loss or destruction of the species' home. Vulnerable habitat or species are monitored and can become increasingly threatened. Some species listed as "vulnerable" may be common in captivity (animal), captivity, an example being the military macaw. There are currently 5196 animals and 6789 plants classified as Vulnerable, compared with 1998 levels of 2815 and 3222, respectively. Practices such as cryoconservation of animal genetic resources have been enforced in efforts to conserve vulnerable breeds of livestock specifically. Criteria The International Union for Conservation of Nature uses several criteria to enter species in this category. A tax ...
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Taxa
In biology, a taxon (back-formation from ''taxonomy''; plural taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and given a particular ranking, especially if and when it is accepted or becomes established. It is very common, however, for taxonomists to remain at odds over what belongs to a taxon and the criteria used for inclusion. If a taxon is given a formal scientific name, its use is then governed by one of the nomenclature codes specifying which scientific name is correct for a particular grouping. Initial attempts at classifying and ordering organisms (plants and animals) were set forth in Carl Linnaeus's system in ''Systema Naturae'', 10th edition (1758), as well as an unpublished work by Bernard and Antoine Laurent de Jussieu. The idea of a unit-based system of biological classification was first made widely available in 1805 in the int ...
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Bythinella Bicarinata
''Bythinella bicarinata'' is a species of very small freshwater snail, an aquatic gastropod mollusk in the family Amnicolidae. Shell description The shell of this species measures about 2.2–2.6 mm long and has a pupoidal shape (shaped like a fly's puparium). In the population first described, there are two ribs running along the length of the shell; hence the scientific name ''bicarinata'' ("two-keeled"). Distribution This species was believed to be endemic to France and severely threatened with extinction. In 1996 it was classified as Critically Endangered (A1ce) by the IUCN, as its habitat – essentially the Fontaine de la Vierge and nearby springs in the Dordogne – was being affected by pollution and the local snail populations had declined more than 80% in the late 20th century. Genetics However, analysis of mtDNA COI and nDNA ITS1 sequence data showed that the "typical" two-keeled ''Bythinella bicarinata'' are actually part of a clade widespread in centr ...
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Subspecies
In biological classification, subspecies is a rank below species, used for populations that live in different areas and vary in size, shape, or other physical characteristics (morphology), but that can successfully interbreed. Not all species have subspecies, but for those that do there must be at least two. Subspecies is abbreviated subsp. or ssp. and the singular and plural forms are the same ("the subspecies is" or "the subspecies are"). In zoology, under the International Code of Zoological Nomenclature, the subspecies is the only taxonomic rank below that of species that can receive a name. In botany and mycology, under the International Code of Nomenclature for algae, fungi, and plants, other infraspecific ranks, such as variety, may be named. In bacteriology and virology, under standard bacterial nomenclature and virus nomenclature, there are recommendations but not strict requirements for recognizing other important infraspecific ranks. A taxonomist decides whether ...
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Phylogenetic Species Concept
In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined. The most recent rigorous estimate for the total number of species of eukaryotes is between 8 and 8.7 million. However, only about 14% of these had been described by 2011. All species (except viruses) are given a two-part name, a "binomial". The first part of a binomial is the genus to which the species belongs. The second part is called the specific name or the specific epithet (in botanical nomenclature, also sometimes in zoologic ...
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DNA Sequence
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid speed of sequencing attained with modern D ...
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Internal Transcribed Spacer
Internal transcribed spacer (ITS) is the spacer DNA situated between the small-subunit ribosomal RNA (rRNA) and large-subunit rRNA genes in the chromosome or the corresponding transcribed region in the polycistronic rRNA precursor transcript. ITS across life domains In bacteria and archaea, there is a single ITS, located between the 16S and 23S rRNA genes. Conversely, there are two ITSs in eukaryotes: ITS1 is located between 18S and 5.8S rRNA genes, while ITS2 is between 5.8S and 28S (in opisthokonts, or 25S in plants) rRNA genes. ITS1 corresponds to the ITS in bacteria and archaea, while ITS2 originated as an insertion that interrupted the ancestral 23S rRNA gene. Organization In bacteria and archaea, the ITS occurs in one to several copies, as do the flanking 16S and 23S genes. When there are multiple copies, these do not occur adjacent to one another. Rather, they occur in discrete locations in the circular chromosome. It is not uncommon in bacteria to carry tRN ...
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NDNA
Nuclear DNA (nDNA), or nuclear deoxyribonucleic acid, is the DNA contained within each cell nucleus of a eukaryotic organism. It encodes for the majority of the genome in eukaryotes, with mitochondrial DNA and plastid DNA coding for the rest. It adheres to Mendelian inheritance, with information coming from two parents, one male and one female—rather than matrilineally (through the mother) as in mitochondrial DNA. Structure Nuclear DNA is a nucleic acid, a polymeric biomolecule or biopolymer, found in the nucleus of eukaryotic cells. Its structure is a double helix, with two strands wound around each other, a structure first described by Francis Crick and James D. Watson (1953) using data collected by Rosalind Franklin. Each strand is a long polymer chain of repeating nucleotides. Each nucleotide is composed of a five-carbon sugar, a phosphate group, and an organic base. Nucleotides are distinguished by their bases: purines, large bases that include adenine and guanine; and pyr ...
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Cytochrome C Oxidase
The enzyme cytochrome c oxidase or Complex IV, (was , now reclassified as a translocasEC 7.1.1.9 is a large transmembrane protein complex found in bacteria, archaea, and mitochondria of eukaryotes. It is the last enzyme in the respiratory electron transport chain of cells located in the membrane. It receives an electron from each of four cytochrome c molecules and transfers them to one oxygen molecule and four protons, producing two molecules of water. In addition to binding the four protons from the inner aqueous phase, it transports another four protons across the membrane, increasing the transmembrane difference of proton electrochemical potential, which the ATP synthase then uses to synthesize ATP. Structure The complex The complex is a large integral membrane protein composed of several metal prosthetic sites and 14 protein subunits in mammals. In mammals, eleven subunits are nuclear in origin, and three are synthesized in the mitochondria. The complex contains two ...
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