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Branching Order Of Bacterial Phyla (Ciccarelli Et Al
Branching order of bacterial phyla may refer to these models: *Branching order of bacterial phyla (Woese, 1987) *Branching order of bacterial phyla (Gupta, 2001) *Branching order of bacterial phyla (Cavalier-Smith, 2002) *Branching order of bacterial phyla (Rappe and Giovanoni, 2003) * Branching order of bacterial phyla (Battistuzzi et al., 2004) * Branching order of bacterial phyla (Ciccarelli et al., 2006) *Branching order of bacterial phyla (Genome Taxonomy Database, 2018) There are several models of the branching order of bacterial phyla, one of these is the Genome Taxonomy Database (GTDB). The GTDB is an initiative to establish a standardised microbial taxonomy based on genome phylogeny, primarily funded by an Aus ... * Branching order of bacterial phyla after ARB Silva Living Tree {{disambiguation ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Woese, 1987)
There are several models of the Branching order of bacterial phyla, one of these was proposed in 1987 paper by Carl Woese. The branching order proposed by Carl Woese was based on molecular phylogeny, which was considered revolutionary as all preceding models were based on discussions of morphology. (''v.'' Monera). Several models have been proposed since and no consensus is reached at present as to the branching order of the major bacterial lineages. The gene used was the 16S ribosomal DNA. Tree The names have been changed to reflect more current nomenclature used by molecular phylogenists. Note on names Despite the impact of the paper on bacterial classification, it was not a proposal for change of taxonomy. Consequently, many clades were given official names. Only subsequently, this occurred: for example, the "purple bacteria and relatives" were renamed Proteobacteria. Discussion In 1987, Carl Woese, regarded as the forerunner of the molecular phylogeny revolution, ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Gupta, 2001)
There are several models of the Branching order of bacterial phyla, one of these was proposed in 2001 by Gupta based on conserved indels or protein, termed "protein signatures", an alternative approach to molecular phylogeny. Some problematic exceptions and conflicts are present to these conserved indels, however, they are in agreement with several groupings of classes and phyla. One feature of the cladogram obtained with this method is the clustering of cell wall morphology (with some exceptions) from monoderms to transitional diderms to traditional diderms. In the cladogram below, yellow=pseudopeptidoglycan monoderms (Gram variable), red=thick peptidoglycan monoderms (Gram positive), blue=thin peptidoglycan diderms (Gram negative), green=atypical, see note in parentheses). See also * Branching order of bacterial phyla (Woese, 1987) * Branching order of bacterial phyla (Rappe and Giovanoni, 2003) * Branching order of bacterial phyla after ARB Silva Living Tree * Branching o ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Cavalier-Smith, 2002)
There are several models of the Branching order of bacterial phyla, one of these was proposed in 2002 and 2004 by Thomas Cavalier-Smith. In this frame of work, the branching order of the major lineage of bacteria are determined based on some morphological characters, such as cell wall structure, and not based on the molecular evidence (molecular phylogeny). Whereas modern molecular studies point towards the root of the tree of life being between a monophyletic Bacteria and Archaea+Eukarya (Neomura), in the Cavalier-Smith theory, the last common ancestor (cenansestor) was a Gram-negative diderm bacterium with peptidoglycan, while Archaea and Eukaryotes stem from Actinobacteria. See also * Branching order of bacterial phyla (Woese, 1987) * Branching order of bacterial phyla (Rappe and Giovanoni, 2003) There are several models of the Branching order of bacterial phyla, the most cited of these was proposed in 1987 paper by Carl Woese Carl Richard Woese (; July 15, 1928 – ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Rappe And Giovanoni, 2003)
There are several models of the Branching order of bacterial phyla, the most cited of these was proposed in 1987 paper by Carl Woese Carl Richard Woese (; July 15, 1928 – December 30, 2012) was an American microbiologist and biophysicist. Woese is famous for defining the Archaea (a new domain of life) in 1977 through a pioneering phylogenetic taxonomy of 16S ribosomal RNA, .... This cladogram was later expanded by Rappé and Giovanoni in 2003 to include newly discovered phyla. Clear names are added in parentheses, see ''list of bacterial phyla''. See also * Branching order of bacterial phyla (Woese, 1987) * Branching order of bacterial phyla (Rappé and Giovanoni, 2003) * Branching order of bacterial phyla after ARB Silva Living Tree * Branching order of bacterial phyla (Ciccarelli et al., 2006) * Branching order of bacterial phyla (Battistuzzi et al.,2004) * Branching order of bacterial phyla (Gupta, 2001) * Branching order of bacterial phyla (Cavalier-Smith, 20 ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Battistuzzi Et Al
{{disambiguation ...
Branching order of bacterial phyla may refer to these models: *Branching order of bacterial phyla (Woese, 1987) *Branching order of bacterial phyla (Gupta, 2001) *Branching order of bacterial phyla (Cavalier-Smith, 2002) *Branching order of bacterial phyla (Rappe and Giovanoni, 2003) * Branching order of bacterial phyla (Battistuzzi et al., 2004) *Branching order of bacterial phyla (Ciccarelli et al., 2006) *Branching order of bacterial phyla (Genome Taxonomy Database, 2018) *Branching order of bacterial phyla after ARB Silva Living Tree The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB, SILVA rRNA database project, and LPSN, with the aim of assembling a database of 16S rRNA sequences of all validly published species ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Ciccarelli Et Al
Branching order of bacterial phyla may refer to these models: *Branching order of bacterial phyla (Woese, 1987) *Branching order of bacterial phyla (Gupta, 2001) *Branching order of bacterial phyla (Cavalier-Smith, 2002) *Branching order of bacterial phyla (Rappe and Giovanoni, 2003) * Branching order of bacterial phyla (Battistuzzi et al., 2004) * Branching order of bacterial phyla (Ciccarelli et al., 2006) *Branching order of bacterial phyla (Genome Taxonomy Database, 2018) There are several models of the branching order of bacterial phyla, one of these is the Genome Taxonomy Database (GTDB). The GTDB is an initiative to establish a standardised microbial taxonomy based on genome phylogeny, primarily funded by an Aus ... * Branching order of bacterial phyla after ARB Silva Living Tree {{disambiguation ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Branching Order Of Bacterial Phyla (Genome Taxonomy Database, 2018)
There are several models of the branching order of bacterial phyla, one of these is the Genome Taxonomy Database (GTDB). The GTDB is an initiative to establish a standardised microbial taxonomy based on genome phylogeny, primarily funded by an Australian Research Council Laureate Fellowship. The genomes used to construct the phylogeny are obtained from RefSeq and Genbank, and GTDB releases are indexed to RefSeq releases, starting with release 76. Importantly and increasingly, this dataset includes draft genomes of uncultured microorganisms obtained from metagenomes and single cells, ensuring improved genomic representation of the microbial world. All genomes are independently quality controlled using CheckM before inclusion in GTDB. The GTDB taxonomy is based on genome trees inferred with FastTree from an aligned concatenated set of 120 single copy marker proteins for Bacteria, and with IQ-TREE from a concatenated set of 53 (since RS207; 122 before) marker proteins for Archaea. Add ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
