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Amphidinium
''Amphidinium'' is a genus of dinoflagellates. The type for the genus is '' Amphidinium operculatum'' Claparède & Lachmann. The genus includes the species '' Amphidinium carterae'' which is used as a model organism. As dinoflagellates, ''Amphidinium'' spp. have chloroplasts. The ''Amphidinium'' chloroplast genome is unusual in not having a single contiguous circular genome. Instead, chloroplast genes encoded in chloroplast DNA are found on numerous 2-3 kbp minicircles, analogous to plasmids. Most minicircles have only a few protein-coding genes; many have just a single gene. There are reports of minicircles that do not have known transcripts, like in the ''Amphidinium carterae'' chloroplast genome, although these were not found in the ''Symbiodinium'' sp. Clade C3 chloroplast genome. Minicircle-derived transcripts can be processed in ways not typical of eukaryotes, including the addition of a 3' poly(U) tail, as opposed to the typical poly(A) tail derived from polyadenylation ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Amphidinium Sulcatum
''Amphidinium'' is a genus of dinoflagellates. The type for the genus is '' Amphidinium operculatum'' Claparède & Lachmann. The genus includes the species '' Amphidinium carterae'' which is used as a model organism. As dinoflagellates, ''Amphidinium'' spp. have chloroplasts. The ''Amphidinium'' chloroplast genome is unusual in not having a single contiguous circular genome. Instead, chloroplast genes encoded in chloroplast DNA are found on numerous 2-3 kbp minicircles, analogous to plasmids. Most minicircles have only a few protein-coding genes; many have just a single gene. There are reports of minicircles that do not have known transcripts, like in the ''Amphidinium carterae'' chloroplast genome, although these were not found in the ''Symbiodinium'' sp. Clade C3 chloroplast genome. Minicircle-derived transcripts can be processed in ways not typical of eukaryotes, including the addition of a 3' poly(U) tail, as opposed to the typical poly(A) tail derived from polyadenylati ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Amphidinium Operculatum
''Amphidinium'' is a genus of dinoflagellates. The type for the genus is '' Amphidinium operculatum'' Claparède & Lachmann. The genus includes the species '' Amphidinium carterae'' which is used as a model organism. As dinoflagellates, ''Amphidinium'' spp. have chloroplasts. The ''Amphidinium'' chloroplast genome is unusual in not having a single contiguous circular genome. Instead, chloroplast genes encoded in chloroplast DNA are found on numerous 2-3 kbp minicircles, analogous to plasmids. Most minicircles have only a few protein-coding genes; many have just a single gene. There are reports of minicircles that do not have known transcripts, like in the ''Amphidinium carterae'' chloroplast genome, although these were not found in the ''Symbiodinium'' sp. Clade C3 chloroplast genome. Minicircle-derived transcripts can be processed in ways not typical of eukaryotes, including the addition of a 3' poly(U) tail, as opposed to the typical poly(A) tail derived from polyadenylati ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Amphidinium Carterae
''Amphidinium carterae'' is a species of dinoflagellates. It was first described by Edward M. Hulburt in 1957, and was named in honour of the British phycologist Nellie Carter-Montford. The type locality is Great Pond, Barnstable County, Massachusetts, USA. Some strains of this species are considered as toxic (against fungi, for example). Distribution ''Amphidinium carterae'' is known from both sides of the North Atlantic Ocean, the Bay of Fundy, the Gulf of Mexico, the Baltic Sea, the North Sea and the Mediterranean Sea. It also occurs in Brazil and New Zealand. It is found in shallow waters in coastal bays and estuaries. Ecology ''Amphidinium carterae'' is a species that sometimes causes algal blooms. In laboratory, the presence of a lysate of an ''A. carterae'' strain affects the embryonic development of sea urchins. Use in research ''Amphidinium carterae'' is a photosynthetic organism and can be cultured in the laboratory under suitable conditions of temperature and li ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Minicircles
Minicircles are small (~4 kb) circular replicons. They occur naturally in some eukaryotic organelle genomes. In the mitochondria-derived kinetoplast of trypanosomes, minicircles encode guide RNAs for RNA editing. In ''Amphidinium'', the chloroplast genome is made of minicircles that encode chloroplast proteins. ''In vitro'' experimentally-derived minicircles Minicircles are small (~4kb) circular plasmid derivatives that have been freed from all prokaryotic vector parts. They have been applied as transgene carriers for the genetic modification of mammalian cells, with the advantage that, since they contain no bacterial DNA sequences, they are less likely to be perceived as foreign and destroyed. (Typical transgene delivery methods involve plasmids, which contain foreign DNA.) The smaller size of minicircles also extends their cloning capacity and facilitates their delivery into cells. Their preparation usually follows a two-step procedure: * production of a 'parental plas ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Luteophanol
Luteophanol is a type of organic compound. There are variants labeled luteophanol A through luteophanol D. They contain the following common fragments with amphidinols: # Polyhydroxyl groups. # Two tetrahydropyran rings. Luteophanols have demonstrated antibacterial properties, but unlike amphidinols, they do not show antifungal activity. :{{clear External links Y. Doi et al., "Luteophanol A, a New Polyhydroxyl Compound from Symbiotic Marine Dinoflagellate Amphidinium sp." Journal of Organic Chemistry ''The Journal of Organic Chemistry'', colloquially known as ''JOC'', is a peer-reviewed scientific journal for original contributions of fundamental research in all branches of theory and practice in organic and bioorganic chemistry. It is publi ... (1997) (abstract)Abstract of article on Luteophanol D Ethers Alkene derivatives Tetrahydropyrans Polyols ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Gymnodiniaceae
Gymnodiniaceae is a family of dinoflagellates belonging to the order Gymnodiniales. Genera As accepted by GBIF; * '' Akashiwo'' G.Hansen & Moestrup (1) * '' Algidasphaeridium'' Matsuoka & Bujak, 1988 (3) * ''Amphidinium'' (1) * '' Apicoporus'' (1) * '' Barrufeta'' (1) * '' Bernardinium'' (4) * '' Cochlodinium'' (28) * '' Filodinium'' (1) * ''Gymnodinium'' (308) * ''Gyrodinium'' (55) * '' Lebouridinium'' (1) * '' Lepidodinium'' (2) * '' Levanderina'' (1) * '' Nusuttodinium'' (5) * '' Pelagodinium'' (1) * '' Plectodinium'' (1) * '' Pseliodinium'' (1) * '' Schillingia'' (1) * '' Sclerodinium'' (2) * '' Spiniferodinium'' (2) * '' Togula'' (3) * ''Torodinium ''Torodinium'' (ˌtɔɹoʊˈdɪniəm) is a genus of unarmored dinoflagellates and comprises two species, ''Torodinium robustum'' and the type species ''Torodinium teredo''.Kofoid, C.A. and Swezy, O. 1921: The free-living unarmored dinoflagellate ...'' (2) The number in brackets is the assumed number of spe ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Journal Of Organic Chemistry
''The Journal of Organic Chemistry'', colloquially known as ''JOC'', is a peer-reviewed scientific journal for original contributions of fundamental research in all branches of theory and practice in organic and bioorganic chemistry. It is published by the publishing arm of the American Chemical Society, with 24 issues per year. According to the ''Journal Citation Reports'', the journal had a 2017 impact factor of 4.805 and it is the journal that received the most cites (100,091 in 2017) in the field of organic chemistry. According to Web of Knowledge (and as December 2012), eleven papers from the journal have received more than 1,000 citations, with the most cited paper having received 7,967 citations. The current editor-in-chief is Scott J. Miller from Yale University. Indexing ''J. Org. Chem.'' is currently indexed in: See also *Organic Letters *Organometallics ''Organometallics'' is a biweekly journal published by the American Chemical Society. Its area of focus is ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Polyadenylation
Polyadenylation is the addition of a poly(A) tail to an RNA transcript, typically a messenger RNA (mRNA). The poly(A) tail consists of multiple adenosine monophosphates; in other words, it is a stretch of RNA that has only adenine bases. In eukaryotes, polyadenylation is part of the process that produces mature mRNA for translation. In many bacteria, the poly(A) tail promotes degradation of the mRNA. It, therefore, forms part of the larger process of gene expression. The process of polyadenylation begins as the transcription of a gene terminates. The 3′-most segment of the newly made pre-mRNA is first cleaved off by a set of proteins; these proteins then synthesize the poly(A) tail at the RNA's 3′ end. In some genes these proteins add a poly(A) tail at one of several possible sites. Therefore, polyadenylation can produce more than one transcript from a single gene (alternative polyadenylation), similar to alternative splicing. The poly(A) tail is important for the nuclea ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Gene
In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." meaning ''generation'' or ''birth'' or ''gender'') can have several different meanings. The Mendelian gene is a basic unit of heredity and the molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protein-coding genes and noncoding genes. During gene expression, the DNA is first copied into RNA. The RNA can be directly functional or be the intermediate template for a protein that performs a function. The transmission of genes to an organism's offspring is the basis of the inheritance of phenotypic traits. These genes make up different DNA sequences called genotypes. Genotypes along with environmental and developmental factors determine what the phenotypes will be. Most biological traits are under the influence of polygenes (many different genes) as well as gen ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Plasmids
A plasmid is a small, extrachromosomal DNA molecule within a cell that is physically separated from chromosomal DNA and can replicate independently. They are most commonly found as small circular, double-stranded DNA molecules in bacteria; however, plasmids are sometimes present in archaea and eukaryotic organisms. In nature, plasmids often carry genes that benefit the survival of the organism and confer selective advantage such as antibiotic resistance. While chromosomes are large and contain all the essential genetic information for living under normal conditions, plasmids are usually very small and contain only additional genes that may be useful in certain situations or conditions. Artificial plasmids are widely used as vectors in molecular cloning, serving to drive the replication of recombinant DNA sequences within host organisms. In the laboratory, plasmids may be introduced into a cell via transformation. Synthetic plasmids are available for procurement over the intern ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Genome
In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding genes, other functional regions of the genome such as regulatory sequences (see non-coding DNA), and often a substantial fraction of 'junk' DNA with no evident function. Almost all eukaryotes have mitochondria and a small mitochondrial genome. Algae and plants also contain chloroplasts with a chloroplast genome. The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The International Human Genome Project reported the sequence of the genome for ''Homo sapiens'' in 200The Human Genome Project although the initial "finished" sequence was missing 8% of the genome consisting mostly of repetitive sequences. With advancements in technology that could handle sequenci ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
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