''Streptomyces griseus'' is a
species
A species () is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. It is the basic unit of Taxonomy (biology), ...
of
bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micr ...
in the
genus
Genus (; : genera ) is a taxonomic rank above species and below family (taxonomy), family as used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In bino ...
''
Streptomyces'' commonly found in soil. A few
strains have been also reported from deep-sea sediments. It is a
Gram-positive
In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall.
The Gram stain is ...
bacterium with high
GC content
In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either guanine (G) or cytosine (C). This measure indicates the proportion of G and C bases out of ...
. Along with most other streptomycetes, ''S. griseus'' strains are well known producers of
antibiotics
An antibiotic is a type of antimicrobial substance active against bacteria. It is the most important type of antibacterial agent for fighting pathogenic bacteria, bacterial infections, and antibiotic medications are widely used in the therapy ...
and other such commercially significant
secondary metabolite
Secondary metabolites, also called ''specialised metabolites'', ''secondary products'', or ''natural products'', are organic compounds produced by any lifeform, e.g. bacteria, archaea, fungi, animals, or plants, which are not directly involved ...
s. These strains are known to be producers of 32 different structural types of
bioactive compound
A bioactive compound is a compound that has an effect on a living organism, tissue or cell, usually demonstrated by basic research in vitro or in vivo in the laboratory. While dietary nutrients are essential to life, bioactive compounds have not ...
s.
Streptomycin
Streptomycin is an antibiotic medication used to treat a number of bacterial infections, including tuberculosis, Mycobacterium avium complex, ''Mycobacterium avium'' complex, endocarditis, brucellosis, Burkholderia infection, ''Burkholderia'' i ...
, the first antibiotic ever reported from a bacterium, comes from strains of ''S. griseus''. Recently, the
whole genome sequence of one of its strains had been completed.
The taxonomic history of ''S. griseus'' and its phylogenetically related strains has been turbulent. ''S. griseus'' was first described in 1914 by Krainsky, who called the species ''
Actinomyces griseus''. The name was changed in 1948 by
Waksman and Henrici to ''Streptomyces griseus''. The interest in these strains stems from their ability to produce streptomycin, a compound which demonstrated significant bactericidal activity against organisms such as ''
Yersinia pestis
''Yersinia pestis'' (''Y. pestis''; formerly ''Pasteurella pestis'') is a Gram-negative bacteria, gram-negative, non-motile bacteria, non-motile, coccobacillus Bacteria, bacterium without Endospore, spores. It is related to pathogens ''Yer ...
'' (the causative agent of plague) and ''
Mycobacterium tuberculosis
''Mycobacterium tuberculosis'' (M. tb), also known as Koch's bacillus, is a species of pathogenic bacteria in the family Mycobacteriaceae and the causative agent of tuberculosis.
First discovered in 1882 by Robert Koch, ''M. tuberculosis'' ha ...
'' (the causative agent of tuberculosis). Streptomycin was discovered in the laboratory of
Selman Waksman
Selman Abraham Waksman (July 22, 1888 – August 16, 1973) was a Russian-born American inventor, biochemist and microbiologist, whose research into the decomposition of organisms that live in soil enabled the discovery of streptomycin and severa ...
, although his PhD student
Albert Schatz probably did most of the work on these strains of bacteria and the antibiotic they produce.
Taxonomy
''Streptomyces'' is the largest genus of the
Actinomycetota
The Actinomycetota (or Actinobacteria) are a diverse phylum of Gram-positive bacteria with high GC content. They can be terrestrial or aquatic. They are of great importance to land flora because of their contributions to soil systems. In soil t ...
and is the type genus of the family Streptomycetaceae.
These are Gram-positive bacteria with high GC content
[ and are characterised by a complex secondary metabolism.] They produce over two-thirds of the clinically useful antibiotic
An antibiotic is a type of antimicrobial substance active against bacteria. It is the most important type of antibacterial agent for fighting pathogenic bacteria, bacterial infections, and antibiotic medications are widely used in the therapy ...
s of natural origin. Streptomycetes are found predominantly in soil
Soil, also commonly referred to as earth, is a mixture of organic matter, minerals, gases, water, and organisms that together support the life of plants and soil organisms. Some scientific definitions distinguish dirt from ''soil'' by re ...
and in decaying vegetation, and most produce spores. Streptomycetes are noted for their distinct "earthy" odor which results from production of a volatile metabolite
In biochemistry, a metabolite is an intermediate or end product of metabolism.
The term is usually used for small molecules. Metabolites have various functions, including fuel, structure, signaling, stimulatory and inhibitory effects on enzymes, c ...
, geosmin
Geosmin ( ) is an irregular sesquiterpenoid with a distinct earthy or musty odor, which most people can easily smell. The geosmin odor detection threshold in humans is very low, ranging from 0.006 to 0.01 micrograms per liter in water. Geosmin, a ...
.[
Like other streptomycetes, ''S. griseus'' has a high GC content in its genome, with an average of 72.2%.][
] The species was first classified within the genus ''Streptomyces'' by Waksman and Henrici in 1948.[ The taxonomy of ''S. griseus'' and its evolutionarily related strains have been a considerable source of confusion for microbial systematists.] 16S rRNA
16S ribosomal RNA (or 16Svedberg, S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure.
The genes coding for it are referred to as ...
gene sequence data have been used to recognise the related strains, and are called ''S. griseus'' 16S rRNA gene clade.[ The strains of this clade have homogeneous ]phenotypic
In genetics, the phenotype () is the set of observable characteristics or traits of an organism. The term covers the organism's morphology (physical form and structure), its developmental processes, its biochemical and physiological propert ...
properties but show substantial genotypic heterogenecity based on genomic
Genomics is an interdisciplinary field of molecular biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, ...
data. Several attempts are still made to solve this issue using techniques such as DNA:DNA homology[ and multilocus sequence typing.] A whole genome sequence was carried out on the IFO 13350 strain of ''S. griseus''.[
]
Physiology and morphology
''S. griseus'' and its related strains have recently been shown to be alkaliphilic
Alkaliphiles are a class of extremophilic microbes capable of survival in alkaline ( pH roughly 8.5–11) environments, growing optimally around a pH of 10. These bacteria can be further categorized as obligate alkaliphiles (those that require hig ...
, i.e., they grow best at alkaline
In chemistry, an alkali (; from the Arabic word , ) is a basic salt of an alkali metal or an alkaline earth metal. An alkali can also be defined as a base that dissolves in water. A solution of a soluble base has a pH greater than 7.0. The ...
pH values. Although these organisms grow in a wide pH range (from 5 to 11), they show a growth optimum at pH 9.[ They produce grey ]spore
In biology, a spore is a unit of sexual reproduction, sexual (in fungi) or asexual reproduction that may be adapted for biological dispersal, dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores fo ...
masses and grey-yellow reverse pigments
A pigment is a powder used to add or alter color or change visual appearance. Pigments are completely or nearly solubility, insoluble and reactivity (chemistry), chemically unreactive in water or another medium; in contrast, dyes are colored sub ...
when they grow as colonies
A colony is a territory subject to a form of foreign rule, which rules the territory and its indigenous peoples separated from the foreign rulers, the colonizer, and their '' metropole'' (or "mother country"). This separated rule was often or ...
.[ The spores have smooth surfaces and are arranged as straight chains.][
]
Ecology
''S. griseus'' strains have been isolated from various ecologies, including stell waste tips, rhizosphere
The rhizosphere is the narrow region of soil or Substrate (biology), substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Pore space in soil, Soil pores in the rhizosphere can ...
, deep sea sediments and coastal beach and dune sand systems. Recent studies have indicated the strains of ''S. griseus'' might be undergoing ecology-specific evolution, giving rise to genetic variation with the specific ecology, termed ecovars.[
]
Antibiotic production
Interest in the genus ''Streptomyces'' for antibiotics came after the discovery of the antibiotic streptomycin in a ''S. griseus'' strain in 1943.
The discovery of streptomycin, an antituberculosis
Tuberculosis (TB), also known colloquially as the "white death", or historically as consumption, is a contagious disease usually caused by ''Mycobacterium tuberculosis'' (MTB) bacteria. Tuberculosis generally affects the lungs, but it can al ...
antibiotic, earned Selman Waksman the Nobel Prize
The Nobel Prizes ( ; ; ) are awards administered by the Nobel Foundation and granted in accordance with the principle of "for the greatest benefit to humankind". The prizes were first awarded in 1901, marking the fifth anniversary of Alfred N ...
in 1952.
The award was not without controversy, since it excluded the nomination of Albert Schatz, who is now recognized as one of the major co-inventors of streptomycin. The strains of this species are now known to be rich sources of antibiotics and to produce 32 different structural types of commercially significant secondary metabolites. Furthermore, the genomic studies have revealed a single strain of ''S. griseus'' IFO 13350 has the capacity to produce 34 different secondary metabolites.
Etymology
By 1943, Albert Schatz, a PhD student working in Selman Waksman’s laboratory, had isolated streptomycin from ''Streptomyces griseus'' (from the Greek
Greek may refer to:
Anything of, from, or related to Greece, a country in Southern Europe:
*Greeks, an ethnic group
*Greek language, a branch of the Indo-European language family
**Proto-Greek language, the assumed last common ancestor of all kno ...
''strepto''- ("twisted") + ''mykēs'' fungus"and the Latin
Latin ( or ) is a classical language belonging to the Italic languages, Italic branch of the Indo-European languages. Latin was originally spoken by the Latins (Italic tribe), Latins in Latium (now known as Lazio), the lower Tiber area aroun ...
''griseus'', “gray”).
The official New Jersey state microbe
''S. griseus'' was designated the official New Jersey state microbe in legislation submitted by Senator Sam Thompson (R-12) in May 2017 and Assemblywoman Annette Quijano (D-20) in June 2017.
The organism was chosen because it is a New Jersey native that made unique contributions to healthcare and scientific research worldwide. A strain of ''S. griseus'' that produced the antibiotic streptomycin was discovered in New Jersey in “heavily manured field soil” from the New Jersey Agricultural Experimental Station by Albert Schatz in 1943. Streptomycin is noteworthy because it is the first significant antibiotic discovered after penicillin, the first systemic antibiotic discovered in America, the first antibiotic active against tuberculosis, and the first-line treatment for plague. Moreover, New Jersey was the home of Selman Waksman, who was awarded the Nobel Prize in Physiology or Medicine for his systematic studies of antibiotic production by ''S. griseus'' and other soil microbes.
The bill, S1729, was signed into law by NJ Governor Phil Murphy May 2019.
See also
*CRT (genetics)
CRT is the gene cluster responsible for the biosynthesis of carotenoids. Those genes are found in eubacteria,Carotenoid biosynthetic pathway: molecular phylogenies and evolutionary behavior of crt genes in eubacteria. Phadwal K, Gene, 17 January 2 ...
, gene cluster
A gene cluster is a group of two or more genes found within an organism's DNA that encode similar peptide, polypeptides or proteins which collectively share a generalized function and are often located within a few thousand base pairs of each othe ...
responsible for the biosynthesis
Biosynthesis, i.e., chemical synthesis occurring in biological contexts, is a term most often referring to multi-step, enzyme-Catalysis, catalyzed processes where chemical substances absorbed as nutrients (or previously converted through biosynthe ...
of carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, cana ...
s
References
External links
Type strain of ''Streptomyces griseus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Authority control
griseus