Rhizoctonia
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''Rhizoctonia'' is a
genus Genus ( plural genera ) is a taxonomic rank used in the biological classification of extant taxon, living and fossil organisms as well as Virus classification#ICTV classification, viruses. In the hierarchy of biological classification, genus com ...
of
fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...
in the order
Cantharellales The Cantharellales are an order of fungi in the class Agaricomycetes. The order includes not only the chanterelles (Cantharellaceae), but also some of the tooth fungi (Hydnaceae), clavarioid fungi ( Aphelariaceae and Clavulinaceae), and cortici ...
.
Species In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate s ...
form thin, effused,
corticioid The corticioid fungi are a group of fungi in the Basidiomycota typically having effused, smooth basidiocarps (fruit bodies) that are formed on the undersides of dead tree trunks or branches. They are sometimes colloquially called crust fungi or pa ...
basidiocarps In fungi, a basidiocarp, basidiome, or basidioma () is the sporocarp (fungi), sporocarp of a basidiomycota, basidiomycete, the Multicellular organism, multicellular structure on which the spore-producing hymenium is borne. Basidiocarps are chara ...
(fruit bodies), but are most frequently found in their sterile,
anamorphic Anamorphic format is the cinematography technique of shooting a widescreen picture on standard 35 mm film or other visual recording media with a non-widescreen native aspect ratio. It also refers to the projection format in which a distorted ...
state. ''Rhizoctonia'' species are
saprotrophic Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi (f ...
, but some are also
facultative {{wiktionary, facultative Facultative means "optional" or "discretionary" (antonym '' obligate''), used mainly in biology in phrases such as: * Facultative (FAC), facultative wetland (FACW), or facultative upland (FACU): wetland indicator statuses ...
plant pathogens Plant pathology (also phytopathology) is the scientific study of diseases in plants caused by pathogens (infectious organisms) and environmental conditions (physiological factors). Organisms that cause infectious disease include fungi, oomyc ...
, causing commercially important
crop disease Plant pathology (also phytopathology) is the scientific study of diseases in plants caused by pathogens (infectious organisms) and environmental conditions (physiological factors). Organisms that cause infectious disease include fungi, oomyc ...
s. Some are also endomycorrhizal associates of
orchids Orchids are plants that belong to the family Orchidaceae (), a diverse and widespread group of flowering plants with blooms that are often colourful and fragrant. Along with the Asteraceae, they are one of the two largest families of flowering ...
. The genus name was formerly used to accommodate many superficially similar, but unrelated fungi.


Taxonomy


History


Anamorphs In mycology, the terms teleomorph, anamorph, and holomorph apply to portions of the life cycles of fungi in the phyla Ascomycota and Basidiomycota: *Teleomorph: the sexual reproductive stage (morph), typically a fruiting body. *Anamorph: an ase ...

''Rhizoctonia'' was introduced in 1815 by French mycologist
Augustin Pyramus de Candolle Augustin Pyramus (or Pyrame) de Candolle (, , ; 4 February 17789 September 1841) was a Swiss botanist. René Louiche Desfontaines launched de Candolle's botanical career by recommending him at a herbarium. Within a couple of years de Candol ...
for
anamorphic Anamorphic format is the cinematography technique of shooting a widescreen picture on standard 35 mm film or other visual recording media with a non-widescreen native aspect ratio. It also refers to the projection format in which a distorted ...
plant pathogenic fungi that produce both hyphae and
sclerotia A sclerotium (; (), is a compact mass of hardened fungal mycelium containing food reserves. One role of sclerotia is to survive environmental extremes. In some higher fungi such as ergot, sclerotia become detached and remain dormant until favor ...
. The name is derived from Ancient Greek, ῥίζα (''rhiza'', "root") + κτόνος (''ktonos'', "murder"), and de Candolle's original species, ''Rhizoctonia crocorum'' (
teleomorph In mycology, the terms teleomorph, anamorph, and holomorph apply to portions of the life cycles of fungi in the phyla Ascomycota and Basidiomycota: *Teleomorph: the sexual reproductive stage (morph), typically a fruiting body. *Anamorph: an ase ...
''
Helicobasidium purpureum ''Helicobasidium purpureum'' is a fungal plant pathogen which causes violet root rot in a number of susceptible plant hosts. It is synonymous with ''Helicobasidium brebissonii'' (Desm.) Donk. It is the teleomorph of ''Tuberculina persicina'' ...
''), is the causal agent of violet root rot of carrots and other root vegetables. Subsequent authors added over 100 additional names to the genus, most of them plant pathogens bearing only a superficial resemblance to the
type species In zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specimen ...
. ''Rhizoctonia'' thus became an artificial form genus of anamorphic fungi comprising a diverse range of unrelated species. As part of a move towards a more natural classification of fungi, American mycologist Royall T. Moore proposed in 1987 that ''Rhizoctonia'' should be restricted to the
type species In zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specimen ...
and its relatives, with unrelated species moved to other genera. Unfortunately, this meant that the best-known but unrelated species, '' Rhizoctonia solani'', would have undergone a name change to ''Moniliopsis solani''. To avoid this, it was subsequently proposed that ''R. solani'' should replace ''R. crocorum'' as the
type species In zoological nomenclature, a type species (''species typica'') is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specimen ...
of ''Rhizoctonia''. This proposal was passed and the type of ''Rhizoctonia'' is now conserved as ''R. solani'' under the
International Code of Nomenclature for algae, fungi, and plants The ''International Code of Nomenclature for algae, fungi, and plants'' (ICN) is the set of rules and recommendations dealing with the formal botanical names that are given to plants, fungi and a few other groups of organisms, all those "trad ...
. R.T. Moore retained species having teleomorphs in the genus ''Thanatephorus'' within ''Rhizoctonia'', but moved those with teleomorphs in the genus ''Ceratobasidium'' to the new anamorphic genus ''Ceratorhiza''.


Teleomorphs

In 1956, Dutch mycologist M.A. Donk published the new teleomorphic genera ''Thanatephorus'' and ''Uthatobasidium'' simultaneously, reserving the former for plant-pathogenic species producing sclerotia-bearing ''Rhizoctonia'' anamorphs (with ''T. cucumeris'' as the type) and the latter for saprotrophic species not producing anamorphs (with ''U. fusisporum'' as the type). In 1996, on the basis of their similar morphology, the two genera were considered to be synonymous by K. Hauerslev and P. Roberts. in 1970 Svrček & Pouzar introduced the genus ''Cejpomyces'' for a species resembling ''Thanatephorus'', but having septate
basidiospores A basidiospore is a reproductive spore produced by Basidiomycete fungi, a grouping that includes mushrooms, shelf fungi, rusts, and smuts. Basidiospores typically each contain one haploid nucleus that is the product of meiosis, and they are pro ...
. Based on their similar morphology, the genera were considered synonymous by Langer (1994). In 1971 Talbot & Keane introduced the genus ''Oncobasidium'' for a plant pathogenic species resembling ''Thanatephorus'' but lacking sclerotia and in 1972 M.A. Donk introduced the genus ''Ypsilondium'' for a species resembling ''Uthatobasidium'' but having bisterigmate (two-spored) basidia. Both genera were considered synonyms of ''Thanatephorus'' by Roberts (1999). In 1978 Tu & Kimbrough introduced the genus ''Aquathanatephorus'' for an isolate from
water hyacinth ''Pontederia crassipes'' (formerly ''Eichhornia crassipes''), commonly known as common water hyacinth is an aquatic plant native to South America, naturalized throughout the world, and often invasive outside its native range.sterigmata In biology, a sterigma (pl. sterigmata) is a small supporting structure. It commonly refers to an extension of the basidium (the spore-bearing cells) consisting of a basal filamentous part and a slender projection which carries a spore at the ti ...
. This was redetermined as ''Thanatephorus cucumeris'' by Andersen (1996). '' Ceratobasidium'' was introduced in 1935 by American mycologist D.P. Rogers to accommodate species of the old form genus '' Corticium'' that showed affinities with the
heterobasidiomycetes Heterobasidiomycetes, including jelly fungi, smuts and rusts, are basidiomycetes with Septum, septate Basidium, basidia. This contrasts them to homobasidiomycetes (alternatively called holobasidiomycetes), including most mushrooms and other Agari ...
. These affinities were the possession of large sterigmata ("cerato-basidium" means "horned
basidium A basidium () is a microscopic sporangium (a spore-producing structure) found on the hymenophore of fruiting bodies of basidiomycete fungi which are also called tertiary mycelium, developed from secondary mycelium. Tertiary mycelium is highly-c ...
") and the production of basidiospores that produce secondary spores. The genus ''Koleroga'' was proposed by Donk (1958) to accommodate ''K. noxia'', a plant pathogen morphologically similar to ''Ceratobasidium'' but not known to produce secondary spores. Talbot (1965) demonstrated that such spores were present in some collections and suggested that ''Koleroga'' be synonymized with ''Ceratobasidium''.


Current status

Molecular A molecule is a group of two or more atoms held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions which satisfy this criterion. In quantum physics, organic chemistry, and bioche ...
research, based on
cladistic Cladistics (; ) is an approach to biological classification in which organisms are categorized in groups (" clades") based on hypotheses of most recent common ancestry. The evidence for hypothesized relationships is typically shared derived char ...
analysis of
DNA sequences A nucleic acid sequence is a succession of bases signified by a series of a set of five different letters that indicate the order of nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule. By convention, sequences are usua ...
, places ''Rhizoctonia'' within the
family Family (from la, familia) is a Social group, group of people related either by consanguinity (by recognized birth) or Affinity (law), affinity (by marriage or other relationship). The purpose of the family is to maintain the well-being of its ...
Ceratobasidiaceae The Ceratobasidiaceae are a family of fungi in the order Cantharellales. All species within the family have basidiocarps (fruit bodies) that are thin and effused. They have sometimes been included within the corticioid fungi or alternatively wit ...
. The genus is only
monophyletic In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic gro ...
, however, if species of ''Ceratobasidium'' (excluding the type) and ''Ceratorhiza'' are included as synonyms, since there is no apparent distinction between these species and species of ''Rhizoctonia''. DNA sequencing has also confirmed the synonymy of ''Uthatobasidium'', ''Oncobasidium'', and ''Koleroga''. Following changes to the
International Code of Nomenclature for algae, fungi, and plants The ''International Code of Nomenclature for algae, fungi, and plants'' (ICN) is the set of rules and recommendations dealing with the formal botanical names that are given to plants, fungi and a few other groups of organisms, all those "trad ...
, the practice of giving different names to teleomorph and anamorph forms of the same fungus was discontinued, meaning that ''Thanatephorus'' became a synonym of the earlier name ''Rhizoctonia''. In its current sense, therefore, the genus ''Rhizoctonia'' includes both anamorphic and teleomorphic fungi.


Redisposition of former species

A comprehensive survey and redisposition of old species names in ''Rhizoctonia'' was published in 1994 by Andersen & Stalpers. Only a few frequently used names are listed below. Many older names are of uncertain application or were never validly published, or both. *''Rhizoctonia bataticola'' = ''
Macrophomina phaseolina ''Macrophomina phaseolina'' is a Botryosphaeriaceae plant pathogen fungus that causes damping off, seedling blight, collar rot, stem rot, charcoal rot, basal stem rot, and root rot on many plant species. Hosts, symptoms, and signs One of the ...
'' (
Botryosphaeriaceae The Botryosphaeriaceae are a family of sac fungi (Ascomycetes), which is the type representative of the order Botryosphaeriales. According to a 2008 estimate, the family contains 26 genera and over 1500 species. Members of this order include no ...
) *''Rhizoctonia carotae'' = '' Athelia arachnoidea'' ( Atheliaceae) *''Rhizoctonia crocorum'' = ''
Helicobasidium purpureum ''Helicobasidium purpureum'' is a fungal plant pathogen which causes violet root rot in a number of susceptible plant hosts. It is synonymous with ''Helicobasidium brebissonii'' (Desm.) Donk. It is the teleomorph of ''Tuberculina persicina'' ...
'' ( Helicobasidiaceae) *''Rhizoctonia leguminicola'' = ''
Botrytis fabae ''Botrytis fabae'' is a plant pathogen, a fungus that causes chocolate spot disease of broad or fava bean plants, ''Vicia faba''. It was described scientifically by Mexican-born Galician microbiologist Juan Rodríguez Sardiña in 1929. Sympto ...
'' (
Sclerotiniaceae The Sclerotiniaceae are a family of fungi in the order Helotiales. Many species in this family are plant pathogens. Genera * '' Asterocalyx'' * ''Botryotinia'' * ''Botrytis'' * '' Ciboria'' * '' Ciborinia'' * '' Coprotinia'' * '' Cudoniopsis'' ...
) *''Rhizoctonia oryzae'' = not a validly published name but now validated as '' Waitea oryzae'' (
Corticiaceae The Corticiaceae are a family of fungi in the order Corticiales. The family formerly included almost all the corticioid (patch- or crust-forming) fungi, whether they were related or not, and as such was highly artificial. In its current sense, ...
) *''Rhizoctonia rubi'' = not a validly published name and of uncertain application (probably
Ascomycota Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The def ...
) *''Rhizoctonia zeae'' = '' Waitea zeae'' (
Corticiaceae The Corticiaceae are a family of fungi in the order Corticiales. The family formerly included almost all the corticioid (patch- or crust-forming) fungi, whether they were related or not, and as such was highly artificial. In its current sense, ...
)


Habitat and distribution

Species are
saprotrophic Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi (f ...
, often occurring in soil and producing basidiocarps (fruit bodies) on dead stems and plant detritus. They are also opportunistic plant pathogens, with an almost unlimited host range, and have been isolated from
orchid mycorrhiza Orchid mycorrhizae are endomycorrhizal fungi which develop symbiotic relationships with the roots and seeds of plants of the family Orchidaceae. Nearly all orchids are myco-heterotrophic at some point in their Biological life cycle, life cycle. Orch ...
. Distribution appears to be
cosmopolitan Cosmopolitan may refer to: Food and drink * Cosmopolitan (cocktail), also known as a "Cosmo" History * Rootless cosmopolitan, a Soviet derogatory epithet during Joseph Stalin's anti-Semitic campaign of 1949–1953 Hotels and resorts * Cosmopoli ...
.


Economic importance

'' Rhizoctonia solani'' causes a wide range of commercially significant plant diseases. It is one of the fungi responsible for Brown patch (a
turfgrass A lawn is an area of soil-covered land planted with grasses and other durable plants such as clover which are maintained at a short height with a lawnmower (or sometimes grazing animals) and used for aesthetic and recreational purposes. ...
disease),
damping off Damping off (or damping-off) is a horticultural disease or condition, caused by several different pathogens that kill or weaken seeds or seedlings before or after they germinate. It is most prevalent in wet and cool conditions. Symptoms There ar ...
in seedlings, as well as black scurf of
potatoes The potato is a starchy food, a tuber of the plant ''Solanum tuberosum'' and is a root vegetable native to the Americas. The plant is a perennial in the nightshade family Solanaceae. Wild potato species can be found from the southern United ...
, bare patch of
cereals A cereal is any grass cultivated for the edible components of its grain (botanically, a type of fruit called a caryopsis), composed of the endosperm, germ, and bran. Cereal grain crops are grown in greater quantities and provide more food en ...
,
root rot Root rot is a condition in which anoxic conditions in the soil or potting media around the roots of a plant cause them to rot. This occurs due to excessive standing water around the roots. It is found in both indoor and outdoor plants, although ...
of
sugar beet A sugar beet is a plant whose root contains a high concentration of sucrose and which is grown commercially for sugar production. In plant breeding, it is known as the Altissima cultivar group of the common beet (''Beta vulgaris''). Together wi ...
, belly rot of
cucumber Cucumber (''Cucumis sativus'') is a widely-cultivated Vine#Horticultural climbing plants, creeping vine plant in the Cucurbitaceae family that bears usually cylindrical Fruit, fruits, which are used as culinary vegetables.
, sheath blight of
rice Rice is the seed of the grass species ''Oryza sativa'' (Asian rice) or less commonly ''Oryza glaberrima ''Oryza glaberrima'', commonly known as African rice, is one of the two domesticated rice species. It was first domesticated and grown i ...
, and many other pathogenic conditions. '' Rhizoctonia oryzae-sativae'' causes 'aggregate sheath spot' and 'sclerotium' disease of rice. The subtropical '' Rhizoctonia noxia'' causes 'black rot' of coffee and other foliar blights, whilst '' Rhizoctonia theobromae'' causes 'vascular-streak dieback' of ''
Theobroma cacao ''Theobroma cacao'', also called the cacao tree and the cocoa tree, is a small ( tall) evergreen tree in the family Malvaceae. Its seeds, cocoa beans, are used to make chocolate liquor, cocoa solids, cocoa butter and chocolate. The largest pro ...
'' (cocoa tree). In Europe, '' Rhizoctonia butinii'' causes web blight of spruce. An efficient conversion of
tryptophan Tryptophan (symbol Trp or W) is an α-amino acid that is used in the biosynthesis of proteins. Tryptophan contains an α-amino group, an α- carboxylic acid group, and a side chain indole, making it a polar molecule with a non-polar aromatic ...
to
indole-3-acetic acid Indole-3-acetic acid (IAA, 3-IAA) is the most common naturally occurring plant hormone of the auxin class. It is the best known of the auxins, and has been the subject of extensive studies by plant physiologists. IAA is a derivative of indole, con ...
(IAA) and/or
tryptophol Tryptophol is an aromatic alcohol that induces sleep in humans. It is found in wine as a secondary product of ethanol fermentation. It was first described by Felix Ehrlich in 1912. It is also produced by the trypanosomal parasite in sleeping si ...
can be achieved by some species in the genus ''Rhizoctonia''.Efficient Conversion of L-Tryptophan to Indole-3-Acetic Acid and/or Tryptophol by Some Species of Rhizoctonia. Toshiko Furukawa, Jinichiro Koga, Takashi Adachi, Kunihei Kishi and Kunihiko Syono, Plant Cell Physiol., 1996, volume 37, issue 7, pages 899-905
abstract


References


External links


Index Fungorum
* {{Taxonbar, from=Q2716477 Cantharellales Fungal plant pathogens and diseases Agaricomycetes genera