HOME

TheInfoList



OR:

''Myxococcus xanthus'' is a
gram-negative Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall ...
, rod-shaped species of
myxobacteria The myxobacteria ("slime bacteria") are a group of bacteria that predominantly live in the soil and feed on insoluble organic substances. The myxobacteria have very large genomes relative to other bacteria, e.g. 9–10 million nucleotides except ...
that exhibits various forms of self-organizing behavior in response to environmental cues. Under normal conditions with abundant food, it exists as a
predatory Predation is a biological interaction where one organism, the predator, kills and eats another organism, its prey. It is one of a family of common feeding behaviours that includes parasitism and micropredation (which usually do not kill th ...
,
saprophytic Saprotrophic nutrition or lysotrophic nutrition is a process of chemoheterotrophic extracellular digestion involved in the processing of decayed (dead or waste) organic matter. It occurs in saprotrophs, and is most often associated with fungi ( ...
single-species
biofilm A biofilm comprises any syntrophic consortium of microorganisms in which cells stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular ...
called a
swarm Swarm behaviour, or swarming, is a collective behaviour exhibited by entities, particularly animals, of similar size which aggregate together, perhaps milling about the same spot or perhaps moving ''en masse'' or migrating in some direction. ...
. Under starvation conditions, it undergoes a multicellular development cycle.


Colony growth

A
swarm Swarm behaviour, or swarming, is a collective behaviour exhibited by entities, particularly animals, of similar size which aggregate together, perhaps milling about the same spot or perhaps moving ''en masse'' or migrating in some direction. ...
of ''M. xanthus'' is a distributed system, containing millions of bacteria that communicate among themselves in a non-centralized fashion. Simple patterns of cooperative behavior among the members of the colony combine to generate complex group behaviors in a process known as "
stigmergy Stigmergy ( ) is a mechanism of indirect coordination, through the environment, between agents or actions. The principle is that the trace left in the environment by an individual action stimulates the performance of a succeeding action by the sam ...
". For example, the tendency for one cell to
glide Glide may refer to: * Gliding flight, to fly without thrust Computing *Glide API, a 3D graphics interface *Glide OS, a web desktop *Glide (software), an instant video messenger *Glide, a molecular docking software by Schrödinger (company), Schr� ...
only when in direct contact with another results in the colony forming swarms called "wolf-packs" that may measure up to several inches wide. This behavior is advantageous to the members of the swarm, as it increases the concentration of extracellular digestive
enzymes Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecule ...
secreted by the bacteria, thus facilitating predatory feeding. ''M. xanthus'' feeds on dead biomass of a broad range of bacteria and some fungi, discriminating live from dead cells, and causing cell death and
lysis Lysis ( ) is the breaking down of the membrane of a cell, often by viral, enzymic, or osmotic (that is, "lytic" ) mechanisms that compromise its integrity. A fluid containing the contents of lysed cells is called a ''lysate''. In molecular bio ...
when required. During stressful conditions, the bacteria undergo a process in which about 100,000 individual cells aggregate to form a structure called the ''fruiting body'' over the course of several hours. On the interior of the fruiting body, the rod-shaped cells differentiate into spherical, thick-walled
spores In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, f ...
. They undergo changes in the synthesis of new
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s, as well as alterations in the
cell wall A cell wall is a structural layer surrounding some types of cells, just outside the cell membrane. It can be tough, flexible, and sometimes rigid. It provides the cell with both structural support and protection, and also acts as a filtering mech ...
, which parallel the morphological changes. During these aggregations, dense ridges of cells move in ripples, which wax and wane over 5 hours.


Motility

An important part of ''M. xanthus'' behavior is its ability to move on a solid surface by a mechanism called "gliding".
Gliding Motility Gliding motility is a type of translocation used by microorganisms that is independent of propulsive structures such as flagella, pili, and fimbriae. Gliding allows microorganisms to travel along the surface of low aqueous films. The mechanisms of ...
is a method of locomotion that allows for movement, without the help of flagella, on a solid surface. Gliding Motility is also called A-motility (adventurous). In A motility, single cells move, resulting in a distribution with many single cells. M. xanthus have the ability to use a second type of motility. This motility is called Social motility, single cells do not move, but cells that are close to one another move. This leads to a spatial distribution of cells with many clusters and few isolated single cells. This motility depend on the presence of the Type IV pili and diverse polysaccharides. More than 37 genes are involved in the A-motility system, which comprises multiple motor elements that are arrayed along the entire cell body. Each motor element appears to be localized to the periplasmic space and is bound to the peptidoglycan layer. The motors are hypothesized to move on helical cytoskeletal filaments. Gliding force generated by these motors is coupled to adhesion sites that move freely in the outer membrane, and which provide a specific contact with the substratum, possibly aided by extracellular polysaccharide slime. S-motility may represent a variation of
twitching motility Twitching motility is a form of crawling bacterial motility used to move over surfaces. Twitching is mediated by the activity of hair-like filaments called type IV pili which extend from the cell's exterior, bind to surrounding solid substrates a ...
, since it is mediated by the extension and retraction of
type IV pili A pilus (Latin for 'hair'; plural: ''pili'') is a hair-like appendage found on the surface of many bacteria and archaea. The terms ''pilus'' and '' fimbria'' (Latin for 'fringe'; plural: ''fimbriae'') can be used interchangeably, although some r ...
that extend through the leading cell pole. The genes of the S-motility system appear to be homologs of genes involved in the biosynthesis, assembly, and function of twitching motility in other bacteria.


Cell differentiation, fruiting and sporulation

In response to starvation, myxobacteria develop species-specific multicellular fruiting bodies. Starting from a uniform swarm of cells, some aggregate into fruiting bodies, while other cells remain in a vegetative state. Those cells that participate in formation of the fruiting body transform from rods into spherical, heat-resistant myxospores, while the peripheral cells remain rod-shaped. Although not as tolerant to environmental extremes as ''Bacillus''
endospore An endospore is a dormant, tough, and non-reproductive structure produced by some bacteria in the phylum Bacillota. The name "endospore" is suggestive of a spore or seed-like form (''endo'' means 'within'), but it is not a true spore (i.e., no ...
s, the relative resistance of myxospores to
desiccation Desiccation () is the state of extreme dryness, or the process of extreme drying. A desiccant is a hygroscopic (attracts and holds water) substance that induces or sustains such a state in its local vicinity in a moderately sealed container. ...
and freezing enables myxobacteria to survive seasonally harsh environments. When a nutrient source becomes once again available, the myxospores germinate, shedding their spore coats to emerge into rod-shaped vegetative cells. The synchronized germination of thousands of myxospores from a single fruiting body enables the members of the new colony of myxobacteria to immediately engage in cooperative feeding. ''M. xanthus'' cells can also differentiate into environmentally-resistant spores in a starvation-independent manner. This process, known as chemically-induced sporulation, is triggered by the presence of glycerol and other chemical compounds at high concentrations. The biological implications of this sporulation process have been controversial for decades due to the unlikeliness to find such high concentrations of chemical inducers in their natural environment. However, the finding that the antifungal compound ambruticin acts as a potent natural inducer at concentrations expected to be present in soil, suggests that chemically induced sporulation is the result of competition and communication with the ambruticin-producing myxobacterium ''Sorangium cellulosum''.


Intercellular communication

It is very likely that cells communicate during the process of fruiting and sporulation, because a group of cells that starved together form myxospores inside fruiting bodies. Intercellular signal appears to be necessary to ensure that sporulation happens in the proper place and at the proper time. Research supports the existence of an extracellular signal, A-factor, which is necessary for developmental gene expression and for the development of a complete fruiting body.


Ability to eavesdrop

It has been shown that an ''M. xanthus'' swarm is capable of eavesdropping on the extracellular signals that are produced by the bacteria it preys upon, leading to changes in swarm behaviour increasing its efficiency as a predator. This allows for a highly adaptive physiology that will have likely contributed to the near ubiquitous distribution of the myxobacteria.


Importance in research

The complex life cycles of the myxobacteria make them very attractive
models A model is an informative representation of an object, person or system. The term originally denoted the plans of a building in late 16th-century English, and derived via French and Italian ultimately from Latin ''modulus'', a measure. Models c ...
for the study of
gene regulation Regulation of gene expression, or gene regulation, includes a wide range of mechanisms that are used by cells to increase or decrease the production of specific gene products (protein or RNA). Sophisticated programs of gene expression are wide ...
as well as cell to cell interactions. The traits of ''M. xanthus'' make it very easy to study, and therefore important to research. Laboratory strains of ''M. xanthus'' are available that are capable of planktonic growth in shaker culture, so that they are easy to grow in large numbers. The tools of classical and molecular genetics are relatively well-developed in ''M. xanthus''. Although the fruiting bodies of ''M. xanthus'' are relatively primitive compared with, say, the elaborate structures produced by ''Stigmatella aurantiaca'' and other myxobacteria, the great majority of genes known to be involved in development are conserved across species. In order to make agar cultures of ''M. xanthus'' grow into fruiting bodies, one simply can plate the bacteria on starvation media. Furthermore, it is possible to artificially induce the production of myxospores without the intervening formation of fruiting bodies, by adding compounds such as glycerol or various metabolites to the medium. In this way, different stages in the developmental cycle can be experimentally isolated. The genome of ''M. xanthus'' has been completely sequenced. The size of its genome may reflect the complexity of its life cycle. At 9.14 
megabase A base pair (bp) is a fundamental unit of double-stranded nucleic acids consisting of two nucleobases bound to each other by hydrogen bonds. They form the building blocks of the DNA double helix and contribute to the folded structure of both DNA ...
, it had the largest known prokaryotic genome until the sequencing of ''
Sorangium cellulosum ''Sorangium cellulosum'' is a soil-dwelling Gram-negative bacterium of the group myxobacteria. It is motile and shows gliding motility. Under stressful conditions this motility, as in other myxobacteria, the cells congregate to form fruiting bodi ...
'' (12.3 Mb), which is also a myxobacterium.


Developmental cheating

Social cheating exists among ''M. xanthus'' commonly. As long as mutants are not too common, if they are unable to perform the group beneficial function of producing spores, they will still reap the benefit of the population as a whole. Research has shown that 4 different types of ''M. xanthus'' mutants showed forms of cheating during development, by being over-represented among spores relative to their initial frequency in the mixture.


Evolution

In 2003, two scientists, Velicer and Yu, deleted certain parts of the ''M. xanthus'' genome, making it unable to swarm effectively on soft
agar Agar ( or ), or agar-agar, is a jelly-like substance consisting of polysaccharides obtained from the cell walls of some species of red algae, primarily from ogonori (''Gracilaria'') and "tengusa" (''Gelidiaceae''). As found in nature, agar is ...
. Individuals were cloned, and allowed to evolve. After a period of 64 weeks, two of the evolving populations had started to swarm outward almost as effectively as normal
wild-type The wild type (WT) is the phenotype of the typical form of a species as it occurs in nature. Originally, the wild type was conceptualized as a product of the standard "normal" allele at a locus, in contrast to that produced by a non-standard, "m ...
colonies. However, the patterns of the swarm were very different from those of the wild-type bacteria. This suggested that they had developed a new way of moving, and Velicer and Yu confirmed this by showing that the new populations had not regained the ability to make pili, which allows wild-type bacteria to swarm. This study addressed questions about the
evolution Evolution is change in the heritable characteristics of biological populations over successive generations. These characteristics are the expressions of genes, which are passed on from parent to offspring during reproduction. Variation ...
of cooperation between individuals that had plagued scientists for years. Very little is known about the evolutionary mechanisms present in ''M. xanthus''. However, it has been discovered that it can establish a generalist
predator Predation is a biological interaction where one organism, the predator, kills and eats another organism, its prey. It is one of a family of common feeding behaviours that includes parasitism and micropredation (which usually do not kill th ...
relationship with different prey, among which is ''
Escherichia coli ''Escherichia coli'' (),Wells, J. C. (2000) Longman Pronunciation Dictionary. Harlow ngland Pearson Education Ltd. also known as ''E. coli'' (), is a Gram-negative, facultative anaerobic, rod-shaped, coliform bacterium of the genus ''Escher ...
''. In this predator-prey relationship, a parallel evolution of both species is observed through genomic and phenotypic modifications, producing in subsequent generations a better adaptation of one of the species that is counteracted by the evolution of the other, following a co-evolutionary model known
Red Queen hypothesis The Red Queen hypothesis is a hypothesis in evolutionary biology proposed in 1973, that species must constantly adapt, evolve, and proliferate in order to survive while pitted against ever-evolving opposing species. The hypothesis was intended t ...
. However, the evolutionary mechanisms present in ''M. xanthus'' that produce this parallel evolution are still unknown.Nair, Ramith R.; Vasse, Marie; Wielgoss, Sébastien; Sun, Lei; Yu, Yuen-Tsu N.; Velicer, Gregory J. "Bacterial predator-prey coevolution accelerates genome evolution and selects on virulence-associated prey defences", Nature Communications, 2019, 10:4301.


Strains

* Myxococcus xanthus DK 1622 * Myxococcus xanthus DZ2 * Myxococcus xanthus DZF1 * Myxococcus xanthus NewJersey2 * Myxococcus xanthus DSM16526T Whole genome comparisons have indicated that ''M. virescens'' is the same species as ''M. xanthus''. ''M. virescens'' was first described in 1892, so has precedence.


References


External links


Model Organism Database

John Kirby at the University of Iowa

Dale Kaiser Lab at Stanford University

Watching social behaviour evolve

Taxonomic Information for Myxococcus xanthusType strain of ''Myxococcus xanthus'' at Bac''Dive'' - the Bacterial Diversity Metadatabase


Videos


''Myxococcus xanthus'' preying on an E. coli colony

''Myxococcus xanthus'' fruiting body formation

''Myxococcus xanthus'' ripples – Predation

Predatory bacterial crowdsourcing
{{Taxonbar, from=Q142803 Myxococcota Articles containing video clips Bacteria described in 1941