The list of
bioinformatics
Bioinformatics () is an interdisciplinary field that develops methods and software tools for understanding biological data, in particular when the data sets are large and complex. As an interdisciplinary field of science, bioinformatics combi ...
software tools can be split up according to the license used:
*
List of proprietary bioinformatics software
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List of open-source bioinformatics software
Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on:
*Sequence analysis software
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List of sequence alignment software
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List of alignment visualization software
This page is a subsection of the list of sequence alignment software.
Multiple alignment visualization tools typically serve four purposes:
* Aid general understanding of large-scale DNA or protein alignments
* Visualize alignments for figures and ...
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Alignment-free sequence analysis In bioinformatics, alignment-free sequence analysis approaches to molecular sequence and structure data provide alternatives over alignment-based approaches.
The emergence and need for the analysis of different types of data generated through biolo ...
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De novo sequence assemblers
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List of gene prediction software
This is a list of software tools and web portals used for gene prediction.
See also
* Gene prediction
* List of RNA structure prediction software
* Comparison of software for molecular mechanics modeling
References
{{Reflist, 2
Predicti ...
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List of disorder prediction software Computational methods exploit the sequence signatures of disorder to predict whether a protein is disordered, given its amino acid sequence
Protein primary structure is the linear sequence of amino acids in a peptide or protein. By convention, t ...
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List of Protein subcellular localization prediction tools
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List of phylogenetics software
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List of phylogenetic tree visualization software
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:Metagenomics_software
*Structural biology software
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List of molecular graphics systems
This is a list of notable software systems that are used for visualizing macromolecules.
Key
The tables below indicate which types of data can be visualized in each system:
See also
* Biological data visualization
* Comparison of nucleic ...
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List of protein-ligand docking software
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List of RNA structure prediction software
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List of software for protein model error verification
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List of protein secondary structure prediction programs
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List of protein structure prediction software
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:Molecular dynamics software
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Structural alignment software
*Other
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Bioinformatics workflow management system
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List of genetic engineering software
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List of systems biology visualization software
Online software
Applications
References
{{Reflist
Systems
A system is a group of interacting or interrelated elements that act according to a set of rules to form a unified whole. A system, surrounded and influenced by its environment, ...
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List of systems biology modelling software
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2D gel analysis software
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List of mass spectrometry software