Ubiquitin-protein ligase E3A (UBE3A) also known as E6AP ubiquitin-protein ligase (E6AP) is an
enzyme
An enzyme () is a protein that acts as a biological catalyst by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different mol ...
that in humans is encoded by the ''UBE3A''
gene
In biology, the word gene has two meanings. The Mendelian gene is a basic unit of heredity. The molecular gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protei ...
. This enzyme is involved in targeting
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
s for degradation within
cells
Cell most often refers to:
* Cell (biology), the functional basic unit of life
* Cellphone, a phone connected to a cellular network
* Clandestine cell, a penetration-resistant form of a secret or outlawed organization
* Electrochemical cell, a d ...
.
Gene
The ''UBE3A'' gene is located on the long (q) arm of
chromosome 15
Chromosome 15 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 15 spans about 99.7 million base pairs (the building material of DNA) and represents between 3% and 3.5% of the total DNA ...
between positions 11 and 13, from
base pair
A base pair (bp) is a fundamental unit of double-stranded nucleic acids consisting of two nucleobases bound to each other by hydrogen bonds. They form the building blocks of the DNA double helix and contribute to the folded structure of both DNA ...
23,133,488 to base pair 23,235,220.
Silencing of ''Ube3a'' on the paternal allele is thought to occur through the
Ube3a-ATS part of a
lincRNA called "LNCAT"
(Large Non-Coding Antisense Transcript).
Tissue distribution
Both copies of the ''UBE3A'' gene are active in most of the body's tissues. In most
neuron
A neuron (American English), neurone (British English), or nerve cell, is an membrane potential#Cell excitability, excitable cell (biology), cell that fires electric signals called action potentials across a neural network (biology), neural net ...
s, however, only the copy inherited from a person's mother (the maternal copy) is normally active; this is known as paternal
imprinting. Recent evidence shows that at least some
glial
Glia, also called glial cells (gliocytes) or neuroglia, are non-neuronal cell (biology), cells in the central nervous system (the brain and the spinal cord) and in the peripheral nervous system that do not produce Action potential, electrical ...
cells and neurons may exhibit biallelic expression of ''UBE3A''. Further work is thus needed to delineate a complete map of ''UBE3A'' imprinting in humans and model organisms such as mice.
Function
The UBE3A gene encodes ubiquitin protein ligase E3A (also known as E6AP), a multifunctional enzyme that plays a crucial role in cellular protein homeostasis and neural development. Its primary function is to act as an
E3 ubiquitin ligase
A ubiquitin ligase (also called an E3 ubiquitin ligase) is a protein that recruits an E2 ubiquitin-conjugating enzyme that has been loaded with ubiquitin, recognizes a protein substrate, and assists or directly catalyzes the transfer of ubiquitin ...
, attaching
ubiquitin
Ubiquitin is a small (8.6 kDa) regulatory protein found in most tissues of eukaryotic organisms, i.e., it is found ''ubiquitously''. It was discovered in 1975 by Gideon Goldstein and further characterized throughout the late 1970s and 19 ...
molecules to specific substrate proteins, thereby marking them for degradation by the
proteasome
Proteasomes are essential protein complexes responsible for the degradation of proteins by proteolysis, a chemical reaction that breaks peptide bonds. Enzymes that help such reactions are called proteases. Proteasomes are found inside all e ...
system.
This process is essential for removing damaged or unnecessary proteins, maintaining cellular health, and regulating the balance of protein synthesis and degradation (proteostasis) at synapses, which is vital for synaptic plasticity, learning, and memory.
In addition to its ligase activity, UBE3A also serves as a
transcriptional co-activator, influencing the expression of genes involved in hormone signaling and neural function.
Notably, in neurons, only the maternal copy of the UBE3A gene is typically active due to genomic imprinting, and disruptions in its expression are linked to neurodevelopmental disorders such as Angelman syndrome and autism spectrum disorders.
UBE3A's precise regulation is therefore critical for normal brain development and function, as both loss and overexpression can lead to significant neurological and behavioral abnormalities.
Clinical significance
Mutation
In biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, ...
s within the ''UBE3A'' gene are responsible for some cases of
Angelman syndrome
Angelman syndrome (AS) is a genetic disorder that affects approximately 1 in 15,000 individuals. AS impairs the function of the nervous system, producing symptoms, such as severe intellectual disability, developmental disability, limited to no ...
and
Prader-Willi syndrome. Most of these mutations result in an abnormally short, nonfunctional version of ubiquitin protein ligase E3A. Because the copy of the gene inherited from a person's father (the paternal copy) is normally inactive in the brain, a mutation in the remaining maternal copy prevents any of the enzyme from being produced in the brain. This loss of enzyme function likely causes the characteristic features of these two conditions.
The ''UBE3A'' gene lies within the human chromosomal region 15q11-13. Other abnormalities in this region of
chromosome 15
Chromosome 15 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 15 spans about 99.7 million base pairs (the building material of DNA) and represents between 3% and 3.5% of the total DNA ...
can also cause Angelman syndrome. These chromosomal changes include deletions, rearrangements (
translocations
In genetics, chromosome translocation is a phenomenon that results in unusual rearrangement of chromosomes. This includes "balanced" and "unbalanced" translocation, with three main types: "reciprocal", "nonreciprocal" and "Robertsonian" transloc ...
) of genetic material, and other abnormalities. Like mutations within the gene, these chromosomal changes prevent any functional ubiquitin protein ligase E3A from being produced in the brain.
UBE3A associates with the E6 protein of certain strains of
HPV
Human papillomavirus infection (HPV infection) is caused by a DNA virus from the ''Papillomaviridae'' family. Many HPV infections cause no symptoms and 90% resolve spontaneously within two years. In some cases, an HPV infection persists and ...
. This interaction promotes the polyubiquitination and subsequent degradation of the tumor suppressor gene
p53
p53, also known as tumor protein p53, cellular tumor antigen p53 (UniProt name), or transformation-related protein 53 (TRP53) is a regulatory transcription factor protein that is often mutated in human cancers. The p53 proteins (originally thou ...
, thereby enabling the immortalization of infected cells.
Strains of HPV with this ability have a higher risk of causing
HPV-associated cancers. UBE3A is also known as E6AP or ''E6-associated protein'' in reference to this mechanism.
Interactions
UBE3A has been shown to
interact with:
*
BLK,
*
Lck,
*
MCM7
DNA replication licensing factor MCM7 is a protein that in humans is encoded by the ''MCM7'' gene.
Function
The protein encoded by this gene is one of the highly conserved mini-chromosome maintenance proteins (MCM) that are essential for the i ...
,
*
MECP2,
*
Progesterone receptor
The progesterone receptor (PR), also known as NR3C3 or nuclear receptor subfamily 3, group C, member 3, is a protein found inside cells. It is activated by the steroid hormone progesterone.
In humans, PR is encoded by a single ''PGR'' gene resi ...
,
*
TSC2
Tuberous sclerosis complex 2 (TSC2), also known as tuberin, is a protein that in humans is encoded by the ''TSC2'' gene.
Function
Mutations in this gene lead to tuberous sclerosis. Its gene product is believed to be a tumor suppressor and is ...
,
*
UBE2D1,
*
UBE2D2
Ubiquitin-conjugating enzyme E2 D2 is a protein that in humans is encoded by the ''UBE2D2'' gene.
Function
Modifying proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ub ...
,
*
UBE2L3,
*
UBQLN1
Ubiquilin-1 is a protein that in humans is encoded by the ''UBQLN1'' gene.
Ubiquilins contain two domains, an N-terminal ubiquitin-like domain and a C-terminal ubiquitin-associated domain. They physically associate with both proteasomes and u ...
,
and
*
UBQLN2
Ubiquilin-2 is a protein that in humans is encoded by the ''UBQLN2'' gene.
Function
This gene encodes a ubiquitin-like protein (ubiquilin) that shares high degree of similarity with related products in yeast, rat and frog. Ubiquilins contain ...
.
References
Further reading
*
*
*
*
*
*
External links
GeneReviews/NCBI/NIH/UW entry on Angelman syndrome OMIM entries on Angelman syndromeGeneCard
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