Darwin Core (often abbreviated to DwC) is an extension of
Dublin Core
140px, Logo of DCMI, maintenance agency for Dublin Core Terms
The Dublin Core vocabulary, also known as the Dublin Core Metadata Terms (DCMT), is a general purpose metadata vocabulary for describing resources of any type. It was first developed ...
for
biodiversity informatics Biodiversity informatics is the application of informatics (academic field), informatics techniques to biodiversity information, such as Taxonomy (biology), taxonomy, biogeography or ecology. It is defined as the application of information technolog ...
. It is meant to provide a stable standard reference for sharing information on biological diversity (
biodiversity
Biodiversity is the variability of life, life on Earth. It can be measured on various levels. There is for example genetic variability, species diversity, ecosystem diversity and Phylogenetics, phylogenetic diversity. Diversity is not distribut ...
). The terms described in this standard are a part of a larger set of vocabularies and technical specifications under development and maintained by
Biodiversity Information Standards (TDWG) (formerly the Taxonomic Databases Working Group).
Description
The Darwin Core is a body of standards intended to facilitate the sharing of information about biological diversity. The DwC includes a glossary of terms, and documentation providing reference definitions, examples, and commentary. An overview of the currently adopted terms and concepts can be found in th
Darwin Core quick reference guidemaintained by
TDWG.
The DwC operational unit is primarily based on
taxa
In biology, a taxon (back-formation from ''taxonomy''; : taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular name and ...
, their occurrence in nature as documented by observations, specimens, and samples, and related information. Included in the standard are documents describing how these terms are managed, how the set of terms can be extended for new purposes, and how the terms can be used.
Each DwC term includes a definition and discussions meant to promote the consistent use of the terms across applications and disciplines. In other contexts, such terms might be called properties, elements, fields, columns, attributes, or concepts. Though the data types and constraints are not provided in the term definitions, recommendations are made about how to restrict the values where appropriate, for instance by suggesting the use of
controlled vocabularies
A controlled vocabulary provides a way to organize knowledge for subsequent retrieval. Controlled vocabularies are used in subject indexing schemes, subject headings, thesauri, taxonomies and other knowledge organization systems. Controlled vo ...
.
DwC standards are versioned and are constantly evolving, and working groups frequently add to the documentation practical examples that discuss, refine, and expand the normative definitions of each term. This approach to documentation allows the standard to adapt to new purposes without disrupting existing applications.
In practice, Darwin Core decouples the definition and semantics of individual terms from application of these terms in different technologies. Darwin Core provides separate guidelines on how to encode the terms as RDF,
[Darwin Core XML Guide](_blank)
/ref> XML
/ref> or text files.
/ref>
The Simple Darwin Core
/ref> is a specification for one particular way to use the terms and to share data about taxa and their occurrences in a simply-structured way. It is likely what is meant if someone were to suggest "formatting your data according to the Darwin Core".
History
Darwin Core was originally created as a Z39.50 profile by the Z39.50 Biology Implementers Group (ZBIG), supported by funding from a USA National Science Foundation award.[An Experimental Z39.50 Information Retrieval Protocol Test Bed for Biological Collection and Taxonomic Data, #981144]
/ref> The name "Darwin Core" was first coined by Allen Allison at the first meeting of the ZBIG held at the University of Kansas in 1998 while commenting on the profile's conceptual similarity with Dublin Core. The Darwin Core profile was later expressed as an XML Schema document for use by the Distributed Generic Information Retrieval (DiGIR) protocol. A TDWG task group was created to revise the Darwin Core, and a ratified metadata standard was officially released on 9 October 2009.
Though ratified as a standard by Biodiversity Information Standards (TDWG) since then, Darwin Core has had numerous previous versions in production usage. The published standard contains a normative term list[Darwin Core Normative Term List](_blank)
/ref> with the complete history of the versions of terms leading to the current standard.
Key projects using Darwin Core
* The Global Biodiversity Information Facility
The Global Biodiversity Information Facility (GBIF) is an international organisation that focuses on making scientific data on biodiversity available via the Internet using web services. The data are provided by many institutions from around th ...
(GBIF)
* The Ocean Biogeographic Information System (OBIS)
The Atlas of Living Australia (ALA)
Online Zoological Collections of Australian Museums (OZCAM)
Mammal Networked Information System (MaNIS)
Ornithological Information System (ORNIS)
VertNet
Canadensys
Sistema Nature 3.0
Encyclopedia of Life
Integrated Digitized Biocollections (iDigBio)
See also
* Darwin Core Archive
Data Curation Network Simple Darwin Core for Non-Biologists Primer
References
External links
Darwin Core Development Site
Official Darwin Core Website
Executive Summary of Darwin Core
Darwin Core Standard Specifications
- GitHub
GitHub () is a Proprietary software, proprietary developer platform that allows developers to create, store, manage, and share their code. It uses Git to provide distributed version control and GitHub itself provides access control, bug trackin ...
repository where DwC is actively maintained
{{DEFAULTSORT:Darwin Core
Computational biology
Bioinformatics
Knowledge representation
Interoperability
Metadata standards