Chordin (from Greek χορδή, string, catgut) is a protein with a prominent role in dorsal–ventral patterning during early embryonic development. In humans it is encoded for by the ''CHRD'' gene.
History
Chordin was originally identified in the
African clawed frog
The African clawed frog (''Xenopus laevis''), also known as simply xenopus, African clawed toad, African claw-toed frog or the ''platanna'') is a species of African Aquatic animal, aquatic frog of the family Pipidae. Its name is derived from the ...
(''Xenopus laevis'') in the laboratory of
Edward M. De Robertis as a key developmental
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
that dorsalizes early
vertebrate
Vertebrates () are animals with a vertebral column (backbone or spine), and a cranium, or skull. The vertebral column surrounds and protects the spinal cord, while the cranium protects the brain.
The vertebrates make up the subphylum Vertebra ...
embryonic tissues.
It was first hypothesized that chordin plays a role in the dorsal homeobox genes in
Spemann's organizer. The chordin gene was discovered through its activation following use of gsc (
goosecoid) and Xnot
mRNA
In molecular biology, messenger ribonucleic acid (mRNA) is a single-stranded molecule of RNA that corresponds to the genetic sequence of a gene, and is read by a ribosome in the process of Protein biosynthesis, synthesizing a protein.
mRNA is ...
injections. The discoverers of chordin concluded that it is expressed in embryo regions where
gsc and Xnot were also expressed, which included the
prechordal plate, the
notochord
The notochord is an elastic, rod-like structure found in chordates. In vertebrates the notochord is an embryonic structure that disintegrates, as the vertebrae develop, to become the nucleus pulposus in the intervertebral discs of the verteb ...
, and the
chordoneural hinge. The expression of the gene in these regions led to the name chordin. Initial functions of chordin were thought to include recruitment of neighboring cells to assist in the forming of the axis along with mediating cell interactions for organization of tail, head, and body regions.
Protein Structure
Chordin is a 941 amino-acids long protein, whose three-dimensional
transmission electron microscopy
Transmission electron microscopy (TEM) is a microscopy technique in which a beam of electrons is transmitted through a specimen to form an image. The specimen is most often an ultrathin section less than 100 nm thick or a suspension on a g ...
structure resembles a horseshoe.
A characteristic structural feature of chordin is the presence of four
cysteine
Cysteine (; symbol Cys or C) is a semiessential proteinogenic amino acid with the chemical formula, formula . The thiol side chain in cysteine enables the formation of Disulfide, disulfide bonds, and often participates in enzymatic reactions as ...
-rich repeats, which are 58–75 residues long, each containing 10 cysteines with characteristic spacings. These repeats are homologous with domains in a number of
extracellular matrix proteins
In biology, the extracellular matrix (ECM), also called intercellular matrix (ICM), is a network consisting of extracellular macromolecules and minerals, such as collagen, enzymes, glycoproteins and hydroxyapatite that provide structural and bi ...
, including
von Willebrand factor.
There are five named
isoforms of this protein that are produced by
alternative splicing
Alternative splicing, alternative RNA splicing, or differential splicing, is an alternative RNA splicing, splicing process during gene expression that allows a single gene to produce different splice variants. For example, some exons of a gene ma ...
.
Gene structure
''CHRD'' is 23 exons long and has a length of 11.5 kb and is localized at 3q27.
The ''THPO'' (
thrombopoietin) gene is located in the same single cosmid clone along with the eukaryotic translation initiation factor-4-gamma gene (EIF4G1).
Function
Chordin
dorsalizes the developing
embryo
An embryo ( ) is the initial stage of development for a multicellular organism. In organisms that reproduce sexually, embryonic development is the part of the life cycle that begins just after fertilization of the female egg cell by the male sp ...
by binding ventralizing
TGFβ proteins such as
bone morphogenetic proteins (BMP) through its four cytosine rich regions.
Chordin blocks BMP signaling by preventing BMP from interacting with cell surface receptors, which inhibits the formation of epidermis and promoting the formation of neural tissue. Chordin specifically inhibits BMP-2,-4,-7.
Chordin function is improved by a few
co-factors that include the
Twisted Gastrulation gene (Tsg) and the zinc metalloprotease. Tsg improves the ability of Chordin to become a BMP antagonist. Zinc metalloprotease functions by cleaving chordin allows for improved signaling with BMP in complexes that were inactive. This occurs by improving Chordin's substrate ability in cleavage reactions and by releasing BMP from chordin products.
Experiments with zebrafish showed that a chordin gene mutation can lead to less neural and dorsal tissue. Target gene deletions of chordin,
follistatin
Follistatin, also known as activin-bindings protein, is a protein that in humans is encoded by the ''FST'' gene. Follistatin is an autocrine glycoprotein that is expressed in nearly all tissues of higher animals.
Its primary function is the b ...
, and
noggin in mice were shown to also have effects on neural induction, while deletion of both chordin and noggin showed more severe effects on neural development. The phenotype for this type of deletion showed almost full headlessness.
This is significant because when only noggin is deficient there are mild defects but the head still forms.
Noggin has been shown to have overlap at the midgastrula in its expression with chordin.
Further experiments testing the role of both noggin and chordin showed that these two proteins are essential for
mesoderm
The mesoderm is the middle layer of the three germ layers that develops during gastrulation in the very early development of the embryo of most animals. The outer layer is the ectoderm, and the inner layer is the endoderm.Langman's Medical ...
al development and anterior pattern elaboration. However, noggin and chordin were not shown to play a significant role in the development of the
anterior visceral endoderm.
Chordin mRNA in mice are expressed early on during the anterior primitive streak. In the chick embryo it is expressed in the anterior cells of
Koller's sickle, which form the anterior cells of the
primitive streak, a key structure through which gastrulation occurs.
As the streak evolves to a node and axial mesoderm, the chordin mRNA is still expressed. This evidence suggests a patterning role of chordin during the early embryo stages.
When chordin was inactivated, animals may initially appear to have normal development, but later on issues manifest in the inner and outer ear along with pharyngeal and cardiovascular abnormalities. Experiments with Xenopus embryos showed that overexpression of BMP1 and TLL1 can be used to counteract chordin's dorsalization functions. This finding suggests that the major chordin antagonist is BMP1.
In mice, chordin is expressed in the node but not in the anterior visceral endoderm. It has been found to be required for
forebrain
In the anatomy of the brain of vertebrates, the forebrain or prosencephalon is the rostral (forward-most) portion of the brain. The forebrain controls body temperature, reproductive functions, eating, sleeping, and the display of emotions.
Ve ...
development.
In developing mice that are deficient in both chordin and
noggin, the head is nearly absent. Chordin is also involved in avian
gastrulation
Gastrulation is the stage in the early embryonic development of most animals, during which the blastula (a single-layered hollow sphere of cells), or in mammals, the blastocyst, is reorganized into a two-layered or three-layered embryo known as ...
and may also play a role in
organogenesis.
References
{{TGFβ receptor superfamily modulators
Proteins
Vertebrate developmental biology
Von Willebrand factor type C domain
CHRD domain