
A chlorosome is a photosynthetic
antenna complex found in
green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
(GSB) and many
green non-sulfur bacteria
Chloroflexales is an order of bacteria in the class Chloroflexia. The clade is also known as filamentous anoxygenic phototrophic bacteria (FAP), as the order contains phototrophs that do not produce oxygen. These bacteria are facultative aerobi ...
(GNsB), together known as green bacteria. They differ from other antenna complexes by their large size and lack of
protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residue (biochemistry), residues. Proteins perform a vast array of functions within organisms, including Enzyme catalysis, catalysing metab ...
matrix supporting the photosynthetic pigments.
Green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
are a group of organisms that generally live in extremely low-light environments, such as at depths of 100 metres in the
Black Sea
The Black Sea is a marginal sea, marginal Mediterranean sea (oceanography), mediterranean sea lying between Europe and Asia, east of the Balkans, south of the East European Plain, west of the Caucasus, and north of Anatolia. It is bound ...
. The ability to capture light energy and rapidly deliver it to where it needs to go is essential to these bacteria, some of which see only a few
photons
A photon () is an elementary particle that is a quantum of the electromagnetic field, including electromagnetic radiation such as light and radio waves, and the force carrier for the electromagnetic force. Photons are massless particles that ...
of light per
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
per day. To achieve this, the bacteria contain chlorosome structures, which contain up to 250,000
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
molecules. Chlorosomes are ellipsoidal bodies, in GSB their length varies from 100 to 200 nm, width of 50-100 nm and height of 15 β 30 nm,
in GNsB the chlorosomes are somewhat smaller.
Chlorosomes are a type of
chromatophores
Chromatophores are cells that produce color, of which many types are Biological pigment, pigment-containing cells, or groups of cells, found in a wide range of animals including amphibians, fish, reptiles, crustaceans and cephalopods. Mammals an ...
that are found in photosynthetic bacteria (e.g.
purple bacteria
Purple bacteria or purple photosynthetic bacteria are Gram-negative proteobacteria that are phototrophic, capable of producing their own food via photosynthesis. They are pigmented with bacteriochlorophyll ''a'' or ''b'', together with various ...
).
Structure
Chlorosome shape can vary between species, with some species containing ellipsoidal shaped chlorosomes and others containing conical or irregular shaped chlorosomes.
Inside green sulfur bacteria, the chlorosomes are attached to type-I
reaction center
A photosynthetic reaction center is a complex of several proteins, biological pigments, and other co-factors that together execute the primary energy conversion reactions of photosynthesis. Molecular excitations, either originating directly from ...
s in the
cell membrane
The cell membrane (also known as the plasma membrane or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of a cell from the outside environment (the extr ...
via
FMO-proteins and a chlorosome baseplate composed of CsmA proteins.
Filamentous anoxygenic phototrophs of the phylum Chloroflexota lack the FMO complex, but instead use a protein complex called B808-866. Unlike the FMO proteins in green sulfur bacteria, B808-866 proteins are embedded in the cytoplasmic membrane and surround type-II reaction centers, providing the link between the reaction centers and the baseplate.
The composition of the chlorosomes is mostly
bacteriochlorophyll
Bacteriochlorophylls (BChl) are photosynthetic pigments that occur in various phototrophic bacteria. They were discovered by C. B. van Niel in 1932. They are related to chlorophylls, which are the primary pigments in plants, algae, and cyanobacte ...
(BChl) with small amounts of
carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, cana ...
s and
quinone
The quinones are a class of organic compounds that are formally "derived from aromatic compounds benzene.html" ;"title="uch as benzene">uch as benzene or naphthalene] by conversion of an even number of βCH= groups into βC(=O)β groups with ...
s surrounded by a
galactolipid
Galactolipids are a type of glycolipid whose sugar group is galactose. They differ from glycosphingolipids in that they do not have nitrogen in their composition.
They are the main part of plant membrane lipids where they substitute phospholipids ...
monolayer.
In ''Chlorobi'', chlorosome monolayers can contain up to eleven different proteins. The proteins of Chlorobi are the ones currently best understood in terms of structure and function. These proteins are named CsmA through CsmF, CsmH through CsmK, and CsmX. Other Csm proteins with different letter suffixes can be found in Chloroflexota and ''Ca.'' "Chloracidobacterium".
Within the chlorosome, the thousands of
BChl
The British Columbia Hockey League (BCHL) is an independent Canadian Junior ice hockey league with 21 teams in British Columbia and Alberta. It was classified as a Junior "A" league within the Hockey Canada framework, until it became independe ...
pigment molecules have the ability to self assemble with each other, meaning they do not interact with protein scaffolding complexes for assembly.
These pigments self assemble in lamellar structures about 10-30 nm wide.
Organization of the light harvesting pigments
Bacteriochlorophyll
Bacteriochlorophylls (BChl) are photosynthetic pigments that occur in various phototrophic bacteria. They were discovered by C. B. van Niel in 1932. They are related to chlorophylls, which are the primary pigments in plants, algae, and cyanobacte ...
and
carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, cana ...
s are two molecules responsible for harvesting light energy. Current models of the organization of
bacteriochlorophyll
Bacteriochlorophylls (BChl) are photosynthetic pigments that occur in various phototrophic bacteria. They were discovered by C. B. van Niel in 1932. They are related to chlorophylls, which are the primary pigments in plants, algae, and cyanobacte ...
and
carotenoid
Carotenoids () are yellow, orange, and red organic pigments that are produced by plants and algae, as well as several bacteria, archaea, and fungi. Carotenoids give the characteristic color to pumpkins, carrots, parsnips, corn, tomatoes, cana ...
s (the main constituents) inside the chlorosomes have put them in a
lamellar
A lamella (: lamellae) is a small plate or flake, from the Latin, and may also refer to collections of fine sheets of material held adjacent to one another in a gill-shaped structure, often with fluid in between though sometimes simply a set of ...
organization, where the long
farnesol
Farnesol is a natural 15-carbon organic compound which is an acyclic sesquiterpene alcohol. Under standard conditions, it is a colorless liquid. It is hydrophobic, and thus insoluble in water, but miscible with oils. As the pyrophosphate ester, ...
tails of the bacteriochlorophyll intermix with carotenoids and each other, forming a structure resembling a
lipid multilayer.
Recently, another study has determined the organization of the
bacteriochlorophyll
Bacteriochlorophylls (BChl) are photosynthetic pigments that occur in various phototrophic bacteria. They were discovered by C. B. van Niel in 1932. They are related to chlorophylls, which are the primary pigments in plants, algae, and cyanobacte ...
molecules in
green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
.
Because they have been so difficult to study, the chlorosomes in
green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
are the last class of
light-harvesting complex
In biology, a light-harvesting complex or LHC is an aggregate consisting of proteins bound with chromophores (chlorophylls and carotenoids) that play a key role in photosynthesis. LHCs are arrayed around photosynthetic reaction centers in both pl ...
es to be characterized structurally by scientists. Each individual chlorosome has a unique organization and this variability in composition had prevented scientists from using
X-ray crystallography
X-ray crystallography is the experimental science of determining the atomic and molecular structure of a crystal, in which the crystalline structure causes a beam of incident X-rays to Diffraction, diffract in specific directions. By measuring th ...
to characterize the internal structure. To get around this problem, the team used a combination of different experimental approaches. Genetic techniques to create a
mutant
In biology, and especially in genetics, a mutant is an organism or a new genetic character arising or resulting from an instance of mutation, which is generally an alteration of the DNA sequence of the genome or chromosome of an organism. It i ...
bacterium with a more regular internal structure,
cryo-electron microscopy
Cryogenic electron microscopy (cryo-EM) is a transmission electron microscopy technique applied to samples cooled to cryogenic temperatures. For biological specimens, the structure is preserved by embedding in an environment of vitreous ice. An ...
to identify the larger distance constraints for the chlorosome,
solid-state nuclear magnetic resonance
Solid-state nuclear magnetic resonance (ssNMR) is a spectroscopy technique used to characterize atomic-level structure and dynamics in solid materials. ssNMR spectra are broader due to nuclear spin interactions which can be categorized as dipolar ...
(NMR) spectroscopy to determine the structure of the chlorosome's component
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
molecules, and
modeling
A model is an informative representation of an object, person, or system. The term originally denoted the Plan_(drawing), plans of a building in late 16th-century English, and derived via French language, French and Italian language, Italian ult ...
to bring together all of the pieces and create a final picture of the chlorosome.
To create the mutant, three genes were inactivated that
green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
acquired late in their
evolution
Evolution is the change in the heritable Phenotypic trait, characteristics of biological populations over successive generations. It occurs when evolutionary processes such as natural selection and genetic drift act on genetic variation, re ...
. In this way it was possible to go backward in
evolutionary time to an intermediate state with much less variable and better ordered chlorosome organelles than the
wild-type
The wild type (WT) is the phenotype of the typical form of a species as it occurs in nature. Originally, the wild type was conceptualized as a product of the standard "normal" allele at a locus, in contrast to that produced by a non-standard, " ...
. The chlorosomes were isolated from the
mutant
In biology, and especially in genetics, a mutant is an organism or a new genetic character arising or resulting from an instance of mutation, which is generally an alteration of the DNA sequence of the genome or chromosome of an organism. It i ...
and the
wild-type
The wild type (WT) is the phenotype of the typical form of a species as it occurs in nature. Originally, the wild type was conceptualized as a product of the standard "normal" allele at a locus, in contrast to that produced by a non-standard, " ...
forms of the bacteria.
Cryo-electron microscopy
Cryogenic electron microscopy (cryo-EM) is a transmission electron microscopy technique applied to samples cooled to cryogenic temperatures. For biological specimens, the structure is preserved by embedding in an environment of vitreous ice. An ...
was used to take pictures of the chlorosomes. The images reveal that the
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
molecules inside chlorosomes have a
nanotube
A nanotube is a nanoscale cylindrical structure with a hollow core, typically composed of carbon atoms, though other materials can also form nanotubes. Carbon nanotubes (CNTs) are the most well-known and widely studied type, consisting of rolled- ...
shape. The team then used MAS
NMR spectroscopy
Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy or magnetic resonance spectroscopy (MRS), is a spectroscopic technique based on re-orientation of atomic nuclei with non-zero nuclear spins in an external magnetic f ...
to resolve the microscopic arrangement of
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
inside the chlorosome. With distance constraints and
DFT
The Department for Transport (DfT) is a ministerial department of the Government of the United Kingdom. It is responsible for the English transport network and a limited number of transport matters in Scotland, Wales, and Northern Ireland t ...
ring current analyses, the organization was found to consist of unique syn-anti monomer stacking. The combination of
NMR
Nuclear magnetic resonance (NMR) is a physical phenomenon in which atomic nucleus, nuclei in a strong constant magnetic field are disturbed by a weak oscillating magnetic field (in the near and far field, near field) and respond by producing ...
,
cryo-electron microscopy
Cryogenic electron microscopy (cryo-EM) is a transmission electron microscopy technique applied to samples cooled to cryogenic temperatures. For biological specimens, the structure is preserved by embedding in an environment of vitreous ice. An ...
and
modeling
A model is an informative representation of an object, person, or system. The term originally denoted the Plan_(drawing), plans of a building in late 16th-century English, and derived via French language, French and Italian language, Italian ult ...
enabled the scientists to determine that the
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
molecules in
green sulfur bacteria
The green sulfur bacteria are a phylum, Chlorobiota, of obligately anaerobic photoautotrophic bacteria that metabolize sulfur.
Green sulfur bacteria are nonmotile (except ''Chloroherpeton thalassium'', which may glide) and capable of anoxyg ...
are arranged in
helices
A helix (; ) is a shape like a cylindrical coil spring or the thread of a machine screw. It is a type of smoothness (mathematics), smooth space curve with tangent lines at a constant angle to a fixed axis. Helices are important in biology, as ...
. In the
mutant
In biology, and especially in genetics, a mutant is an organism or a new genetic character arising or resulting from an instance of mutation, which is generally an alteration of the DNA sequence of the genome or chromosome of an organism. It i ...
bacteria, the
chlorophyll
Chlorophyll is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words (, "pale green") and (, "leaf"). Chlorophyll allows plants to absorb energy ...
molecules are positioned at a nearly 90-degree angle in relation to the long axis of the nanotubes, whereas the angle is less steep in the
wild-type
The wild type (WT) is the phenotype of the typical form of a species as it occurs in nature. Originally, the wild type was conceptualized as a product of the standard "normal" allele at a locus, in contrast to that produced by a non-standard, " ...
organism. The structural framework can accommodate disorder to improve the biological light harvesting function, which implies that a less ordered structure has a better performance.
An alternative energy source
The interactions that lead to the assembly of the chlorophylls in chlorosomes are rather simple and the results may one day be used to build
artificial photosynthetic systems that convert
solar energy
Solar energy is the radiant energy from the Sun's sunlight, light and heat, which can be harnessed using a range of technologies such as solar electricity, solar thermal energy (including solar water heating) and solar architecture. It is a ...
to
electricity
Electricity is the set of physical phenomena associated with the presence and motion of matter possessing an electric charge. Electricity is related to magnetism, both being part of the phenomenon of electromagnetism, as described by Maxwel ...
or
biofuel
Biofuel is a fuel that is produced over a short time span from Biomass (energy), biomass, rather than by the very slow natural processes involved in the formation of fossil fuels such as oil. Biofuel can be produced from plants or from agricu ...
.
List of bacterial taxa containing chlorosomes
List adapted from, Figure 1.
*Phylum
Chlorobiota ("green sulfur bacteria"), in full. Example genera:
** ''
Chlorobium
''Chlorobium'' is a genus of green sulfur bacteria. They are photolithotrophic oxidizers of sulfur and most notably utilise a noncyclic electron transport chain to reduce NAD+. Photosynthesis is achieved using a Type 1 Reaction Centre using b ...
''
** ''
Pelodictyon''
** ''
Prostecochloris''
*Phylum
Chloroflexota
The Chloroflexota are a phylum of bacteria containing isolates with a diversity of phenotypes, including members that are aerobic thermophiles, which use oxygen and grow well in high temperatures; anoxygenic phototrophs, which use light for ph ...
, class
Chloroflexia
The Chloroflexia are a class of bacteria in the phylum Chloroflexota. Chloroflexia are typically filamentous, and can move about through bacterial gliding. It is named after the order Chloroflexales.
Etymology
The name "Chloroflexi" is a Neo ...
("green non-sulfur bacteria"), suborder
Chloroflexineae
Chloroflexales is an order of bacteria in the class Chloroflexia. The clade is also known as filamentous anoxygenic phototrophic bacteria (FAP), as the order contains phototrophs that do not produce oxygen. These bacteria are facultative aerobic. ...
, in full.
** Family
Chloroflexineae
Chloroflexales is an order of bacteria in the class Chloroflexia. The clade is also known as filamentous anoxygenic phototrophic bacteria (FAP), as the order contains phototrophs that do not produce oxygen. These bacteria are facultative aerobic. ...
. Example genera:
*** ''
Chloroflexus
Chloroflexales is an order of bacteria in the class Chloroflexia. The clade is also known as filamentous anoxygenic phototrophic bacteria (FAP), as the order contains phototrophs that do not produce oxygen. These bacteria are facultative aerobic. ...
''
*** ''
Chloronema''
** Family
Oscillochloridaceae. Example genera:
*** ''
Oscillochloris''
* Species ''
Chloracidobacterium thermophilum''. This is the only
Acidobacterium
''Acidobacterium'' is a bacterial genus from the family of Acidobacteriaceae
The Acidobacteriaceae are a family of Acidobacteriota.
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclat ...
known to make a chlorosome. (Proposed in 2021 to be split into three species of different temperature preference by sequence similarity.)
References
{{Reflist
Photosynthesis
Prokaryotic cell anatomy