
The brainstem (or brain stem) is the posterior stalk-like part of the
brain
The brain is an organ (biology), organ that serves as the center of the nervous system in all vertebrate and most invertebrate animals. It consists of nervous tissue and is typically located in the head (cephalization), usually near organs for ...
that connects the
cerebrum
The cerebrum (: cerebra), telencephalon or endbrain is the largest part of the brain, containing the cerebral cortex (of the two cerebral hemispheres) as well as several subcortical structures, including the hippocampus, basal ganglia, and olfac ...
with the
spinal cord
The spinal cord is a long, thin, tubular structure made up of nervous tissue that extends from the medulla oblongata in the lower brainstem to the lumbar region of the vertebral column (backbone) of vertebrate animals. The center of the spinal c ...
.
In the
human brain
The human brain is the central organ (anatomy), organ of the nervous system, and with the spinal cord, comprises the central nervous system. It consists of the cerebrum, the brainstem and the cerebellum. The brain controls most of the activi ...
the brainstem is composed of the
midbrain, the
pons, and the
medulla oblongata.
The midbrain is continuous with the
thalamus
The thalamus (: thalami; from Greek language, Greek Wikt:θάλαμος, θάλαμος, "chamber") is a large mass of gray matter on the lateral wall of the third ventricle forming the wikt:dorsal, dorsal part of the diencephalon (a division of ...
of the
diencephalon through the
tentorial notch, and sometimes the diencephalon is included in the brainstem.
The brainstem is very small, making up around only 2.6 percent of the brain's total weight.
It has the critical roles of regulating
heart
The heart is a muscular Organ (biology), organ found in humans and other animals. This organ pumps blood through the blood vessels. The heart and blood vessels together make the circulatory system. The pumped blood carries oxygen and nutrie ...
and
respiratory function, helping to control
heart rate and
breathing rate.
It also provides the main motor and sensory nerve supply to the
face and
neck via the
cranial nerves
Cranial nerves are the nerves that emerge directly from the brain (including the brainstem), of which there are conventionally considered twelve pairs. Cranial nerves relay information between the brain and parts of the body, primarily to and f ...
. Ten pairs of cranial nerves come from the brainstem. Other roles include the regulation of the
central nervous system
The central nervous system (CNS) is the part of the nervous system consisting primarily of the brain, spinal cord and retina. The CNS is so named because the brain integrates the received information and coordinates and influences the activity o ...
and the body's
sleep cycle.
It is also of prime importance in the conveyance of motor and sensory pathways from the rest of the brain to the body, and from the body back to the brain.
These pathways include the
corticospinal tract
The corticospinal tract is a white matter motor pathway starting at the cerebral cortex that terminates on lower motor neurons and interneurons in the spinal cord, controlling movements of the limbs and trunk. There are more than one million neu ...
(motor function), the
dorsal column-medial lemniscus pathway (
fine touch,
vibration sensation, and
proprioception
Proprioception ( ) is the sense of self-movement, force, and body position.
Proprioception is mediated by proprioceptors, a type of sensory receptor, located within muscles, tendons, and joints. Most animals possess multiple subtypes of propri ...
), and the
spinothalamic tract (
pain
Pain is a distressing feeling often caused by intense or damaging Stimulus (physiology), stimuli. The International Association for the Study of Pain defines pain as "an unpleasant sense, sensory and emotional experience associated with, or res ...
, temperature, itch, and
crude touch).
Structure
The parts of the brainstem are the midbrain, the pons, and the medulla oblongata; the diencephalon is sometimes considered part of the brainstem.
The brainstem extends from just above the
tentorial notch superiorly to the
first cervical vertebra below the
foramen magnum inferiorly.
Midbrain

The
midbrain is further subdivided into three parts:
tectum,
tegmentum, and the
ventral tegmental area. The
tectum forms the ceiling. The tectum comprises the paired structure of the
superior and
inferior colliculi and is the dorsal covering of the
cerebral aqueduct. The
inferior colliculus
The inferior colliculus (IC) (Latin for ''lower hill'') is the principal midbrain nucleus of the Auditory system, auditory pathway and receives input from several peripheral brainstem nuclei in the auditory pathway, as well as inputs from the aud ...
is the principal midbrain nucleus of the auditory pathway and receives input from several peripheral brainstem nuclei, as well as inputs from the auditory cortex. Its inferior brachium (arm-like process) reaches to the
medial geniculate nucleus of the
diencephalon. The
superior colliculus
In neuroanatomy, the superior colliculus () is a structure lying on the tectum, roof of the mammalian midbrain. In non-mammalian vertebrates, the Homology (biology), homologous structure is known as the optic tectum or optic lobe. The adjective f ...
is positioned above the inferior colliculus, and marks the rostral midbrain. It is involved in the special sense of vision and sends its superior brachium to the
lateral geniculate body of the diencephalon.
The
tegmentum which forms the floor of the midbrain, is ventral to the
cerebral aqueduct. Several
nuclei,
tracts, and the
reticular formation are contained here.
The
ventral tegmental area (VTA) is composed of paired
cerebral peduncles. These transmit axons of
upper motor neurons.
Midbrain nuclei
The midbrain consists of:
*
Periaqueductal gray: The
gray matter around the
cerebral aqueduct contains neurons involved in the
pain
Pain is a distressing feeling often caused by intense or damaging Stimulus (physiology), stimuli. The International Association for the Study of Pain defines pain as "an unpleasant sense, sensory and emotional experience associated with, or res ...
desensitization pathway. Neurons synapse here. When stimulated by a signal, the synaptic connections activate neurons in the
nucleus raphe magnus. The pathway then projects down into the
posterior grey column of the spinal cord, inhibiting pain sensation transmission.
*
Oculomotor nerve nucleus: This is the third
cranial nerve nucleus.
*
Trochlear nerve nucleus: This is the fourth cranial nerve.
*
Red nucleus: This is a motor nucleus that sends a descending tract to the
lower motor neurons.
*
Substantia nigra pars compacta: This is a concentration of neurons in the ventral portion of the midbrain that uses
dopamine
Dopamine (DA, a contraction of 3,4-dihydroxyphenethylamine) is a neuromodulatory molecule that plays several important roles in cells. It is an organic chemical of the catecholamine and phenethylamine families. It is an amine synthesized ...
as its
neurotransmitter
A neurotransmitter is a signaling molecule secreted by a neuron to affect another cell across a Chemical synapse, synapse. The cell receiving the signal, or target cell, may be another neuron, but could also be a gland or muscle cell.
Neurotra ...
and is involved in both motor function and emotion. Its dysfunction is implicated in
Parkinson's disease
Parkinson's disease (PD), or simply Parkinson's, is a neurodegenerative disease primarily of the central nervous system, affecting both motor system, motor and non-motor systems. Symptoms typically develop gradually and non-motor issues become ...
.
*
Reticular formation: This is a large area in the
midbrain that is involved in various important functions of the midbrain. In particular, it contains lower motor neurons, is involved in the pain desensitization pathway, is involved in the arousal and consciousness systems, and contains the
locus coeruleus, which is involved in intensive
alertness modulation and in
autonomic reflexes.
*
Central tegmental tract: Directly anterior to the floor of the
fourth ventricle, this is a pathway by which many tracts project up to the cortex and down to the spinal cord.
*
Ventral tegmental area: A
dopaminergic
Dopaminergic means "related to dopamine" (literally, "working on dopamine"), a common neurotransmitter. Dopaminergic substances or actions increase dopamine-related activity in the brain.
Dopaminergic pathways, Dopaminergic brain pathways facil ...
nucleus, known as
group A10 cells is located close to the midline on the floor of the midbrain.
*
Rostromedial tegmental nucleus: A
GABAergic nucleus located adjacent to the ventral tegmental area.
Midbrain - superior colliculus.svg, Cross-section of the midbrain at the level of the superior colliculus
Midbrain - inferior colliculus.svg, Cross-section of the midbrain at the level of the inferior colliculus
Pons
The pons lies between the midbrain and the
medulla oblongata. It is separated from the midbrain by the
superior pontine sulcus, and from the medulla by the
inferior pontine sulcus
The pons (from Latin , "bridge") is part of the brainstem that in humans and other Mammal, mammals, lies inferior to the midbrain, superior to the medulla oblongata and anterior to the cerebellum.
The pons is also called the pons Varolii ("bri ...
.
It contains tracts that carry signals from the
cerebrum
The cerebrum (: cerebra), telencephalon or endbrain is the largest part of the brain, containing the cerebral cortex (of the two cerebral hemispheres) as well as several subcortical structures, including the hippocampus, basal ganglia, and olfac ...
to the medulla and to the
cerebellum
The cerebellum (: cerebella or cerebellums; Latin for 'little brain') is a major feature of the hindbrain of all vertebrates. Although usually smaller than the cerebrum, in some animals such as the mormyrid fishes it may be as large as it or eve ...
and also tracts that carry sensory signals to the
thalamus
The thalamus (: thalami; from Greek language, Greek Wikt:θάλαμος, θάλαμος, "chamber") is a large mass of gray matter on the lateral wall of the third ventricle forming the wikt:dorsal, dorsal part of the diencephalon (a division of ...
. The pons is connected to the cerebellum by the
cerebellar peduncles. The pons houses the respiratory
pneumotaxic center and
apneustic center that make up the pontine respiratory group in the
respiratory center
The respiratory center is located in the medulla oblongata and pons, in the brainstem. The respiratory center is made up of three major respiratory groups of neurons, two in the medulla and one in the pons. In the medulla they are the dorsal ...
. The pons co-ordinates activities of the
cerebellar hemispheres
The cerebellum consists of three parts, a median and two lateral, which are continuous with each other, and are substantially the same in structure. The median portion is constricted, and is called the vermis, from its annulated appearance which ...
.
The
pons and
medulla oblongata are parts of the
hindbrain that form much of the brainstem.
Pons - Middle.svg, Cross-section of the middle pons (at the level of cranial nerve V)
Pons - Inferior.svg, Cross-section of the inferior pons (at the level of the facial genu)
Medulla oblongata
The
medulla oblongata, often just referred to as the medulla, is the lower half of the brainstem continuous with the spinal cord. Its upper part is continuous with the pons.
The medulla contains the
cardiac, dorsal and ventral
respiratory groups, and
vasomotor centres, dealing with
heart rate,
breathing and
blood pressure
Blood pressure (BP) is the pressure of Circulatory system, circulating blood against the walls of blood vessels. Most of this pressure results from the heart pumping blood through the circulatory system. When used without qualification, the term ...
. Another important medullary structure is the
area postrema whose functions include the control of
vomiting
Vomiting (also known as emesis, puking and throwing up) is the forceful expulsion of the contents of one's stomach through the mouth and sometimes the nose.
Vomiting can be the result of ailments like food poisoning, gastroenteritis, pre ...
.
Medulla - Rostral level cross section.svg, Cross-section of the rostral (superior) medulla
Medulla - Middle level cross section.svg, Cross-section of the middle medulla
Medulla - Inferior level cross section.svg, Cross-section of the inferior medulla
Pontomedullary junction
The pons meets the medulla at the pontomedullary junction.
This region is supplied by the joining of the
basilar,
vertebral arteries. The
posterior inferior cerebellar artery also joins from which a large number of perforating arteries arise. Lateral spinal arteries also emerge to supply the posterior surface of the medulla oblongata.
Appearance
;From the front

In the medial part of the
medulla is the
anterior median fissure. Moving laterally on each side are the
medullary pyramids. The pyramids contain the fibers of the
corticospinal tract (also called the pyramidal tract), or the upper motor neuronal axons as they head inferiorly to synapse on lower motor neuronal cell bodies within the
anterior grey column of the
spinal cord
The spinal cord is a long, thin, tubular structure made up of nervous tissue that extends from the medulla oblongata in the lower brainstem to the lumbar region of the vertebral column (backbone) of vertebrate animals. The center of the spinal c ...
.
The
anterolateral sulcus is lateral to the pyramids. Emerging from the anterolateral sulci are the CN XII (
hypoglossal nerve) rootlets. Lateral to these rootlets and the anterolateral sulci are the
olives. The olives are swellings in the medulla containing underlying inferior nucleary nuclei (containing various nuclei and afferent fibers). Lateral (and dorsal) to the olives are the rootlets for
CN IX (
glossopharyngeal), CN X (
vagus) and CN XI (
accessory nerve). The pyramids end at the
pontine medulla junction, noted most obviously by the large
basal pons. From this junction, CN VI (
abducens nerve), CN VII (
facial nerve
The facial nerve, also known as the seventh cranial nerve, cranial nerve VII, or simply CN VII, is a cranial nerve that emerges from the pons of the brainstem, controls the muscles of facial expression, and functions in the conveyance of ta ...
) and CN VIII (
vestibulocochlear nerve) emerge. At the level of the midpons, CN V (the
trigeminal nerve
In neuroanatomy, the trigeminal nerve (literal translation, lit. ''triplet'' nerve), also known as the fifth cranial nerve, cranial nerve V, or simply CN V, is a cranial nerve responsible for Sense, sensation in the face and motor functions ...
) emerges. Cranial nerve III (the
oculomotor nerve) emerges ventrally from the midbrain, while the CN IV (the
trochlear nerve) emerges out from the dorsal aspect of the midbrain.
Between the two pyramids can be seen a
decussation of fibers which marks the transition from the medulla to the spinal cord. The medulla is above the decussation and the spinal cord below.
;From behind

The most medial part of the
medulla is the
posterior median sulcus. Moving laterally on each side is the
gracile fasciculus, and lateral to that is the
cuneate fasciculus. Superior to each of these, and directly inferior to the
obex, are the gracile and cuneate tubercles, respectively. Underlying these are their respective nuclei. The obex marks the end of the
fourth ventricle and the beginning of the
central canal. The posterior intermediate sulcus separates the gracile fasciculus from the cuneate fasciculus. Lateral to the cuneate fasciculus is the
lateral funiculus.
Superior to the obex is the floor of the
fourth ventricle. In the floor of the fourth ventricle, various nuclei can be visualized by the small bumps that they make in the overlying tissue. In the midline and directly superior to the obex is the
vagal trigone and superior to that it the
hypoglossal trigone. Underlying each of these are motor nuclei for the respective cranial nerves. Superior to these trigones are fibers running laterally in both directions. These fibers are known collectively as the
striae medullares. Continuing in a
rostral direction, the large bumps are called the facial colliculi. Each
facial colliculus, contrary to their names, do not contain the facial nerve nuclei. Instead, they have facial nerve axons traversing superficial to underlying abducens (CN VI) nuclei. Lateral to all these bumps previously discussed is an indented line, or
sulcus that runs rostrally, and is known as the
sulcus limitans. This separates the medial motor neurons from the lateral sensory neurons. Lateral to the sulcus limitans is the area of the
vestibular system, which is involved in special sensation. Moving rostrally, the inferior, middle, and superior cerebellar peduncles are found connecting the midbrain to the cerebellum. Directly rostral to the superior cerebellar peduncle, there is the superior medullary velum and then the two trochlear nerves. This marks the end of the pons as the
inferior colliculus
The inferior colliculus (IC) (Latin for ''lower hill'') is the principal midbrain nucleus of the Auditory system, auditory pathway and receives input from several peripheral brainstem nuclei in the auditory pathway, as well as inputs from the aud ...
is directly rostral and marks the caudal midbrain. Middle cerebellar peduncle is located inferior and lateral to the superior cerebellar peduncle, connecting pons to the cerebellum. Likewise, inferior cerebellar peduncle is found connecting the medulla oblongata to the cerebellum.
Blood supply

The main supply of blood to the brainstem is provided by the
basilar arteries and the
vertebral arteries.
It is important to note that there is a bit of variability in how these arteries connect and supply blood to the brain, such as where the arteries fuse or are reinforced. The variability that exists allows for syndromes to be introduced if certain vessels are excluded from where they should normally be. Syndromes can be in fragments or combinations depending on how the vessels are arranged and if the brain is getting adequate blood supply.
Development
The human brainstem emerges from two of the three
primary brain vesicles formed of the
neural tube
In the developing chordate (including vertebrates), the neural tube is the embryonic precursor to the central nervous system, which is made up of the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, ...
. The
mesencephalon is the second of the three primary vesicles, and does not further differentiate into a
secondary brain vesicle. This will become the midbrain. The third primary vesicle, the
rhombencephalon (hindbrain) will further differentiate into two secondary vesicles, the
metencephalon
The metencephalon is the embryonic part of the hindbrain that differentiates into the pons and the cerebellum. It contains a portion of the fourth ventricle and the trigeminal nerve (CN V), abducens nerve (CN VI), facial nerve (CN VII), an ...
and the
myelencephalon. The metencephalon will become the
cerebellum
The cerebellum (: cerebella or cerebellums; Latin for 'little brain') is a major feature of the hindbrain of all vertebrates. Although usually smaller than the cerebrum, in some animals such as the mormyrid fishes it may be as large as it or eve ...
and the pons. The more caudal myelencephalon will become the
medulla.
Function
The brainstem plays important functions in
breathing,
heart rate,
arousal /
consciousness
Consciousness, at its simplest, is awareness of a state or object, either internal to oneself or in one's external environment. However, its nature has led to millennia of analyses, explanations, and debate among philosophers, scientists, an ...
,
sleep
Sleep is a state of reduced mental and physical activity in which consciousness is altered and certain Sensory nervous system, sensory activity is inhibited. During sleep, there is a marked decrease in muscle activity and interactions with th ...
/
wake functions and
attention
Attention or focus, is the concentration of awareness on some phenomenon to the exclusion of other stimuli. It is the selective concentration on discrete information, either subjectively or objectively. William James (1890) wrote that "Atte ...
/ concentration.
There are three main functions of the brainstem:
# The brainstem plays a role in conduction. That is, all information relayed from the body to the cerebrum and cerebellum and vice versa must traverse the brainstem. The ascending pathways coming from the body to the brain are the sensory pathways and include the
spinothalamic tract for pain and temperature sensation and the
dorsal column-medial lemniscus pathway (DCML) including the
gracile fasciculus and the
cuneate fasciculus for touch,
proprioception
Proprioception ( ) is the sense of self-movement, force, and body position.
Proprioception is mediated by proprioceptors, a type of sensory receptor, located within muscles, tendons, and joints. Most animals possess multiple subtypes of propri ...
, and pressure sensation. The facial sensations have similar pathways and will travel in the spinothalamic tract and the DCML. Descending tracts are the axons of upper motor neurons destined to synapse on lower motor neurons in the
ventral horn and
posterior horn. In addition, there are upper motor neurons that originate in the brainstem's vestibular, red, tectal, and reticular nuclei, which also descend and synapse in the spinal cord.
# The cranial nerves III-XII emerge from the brainstem. These cranial nerves supply the face, head, and viscera. (The first two pairs of cranial nerves arise from the cerebrum).
# The brainstem has integrative functions being involved in cardiovascular system control, respiratory control, pain sensitivity control, alertness, awareness, and consciousness. Thus, brainstem damage is a very serious and often life-threatening problem.
Cranial nerves

Ten of the twelve pairs of cranial nerves either target or are sourced from the brainstem nuclei.
The nuclei of the oculomotor nerve (III) and trochlear nerve (IV) are located in the midbrain. The nuclei of the trigeminal nerve (V), abducens nerve (VI), facial nerve (VII) and vestibulocochlear nerve (VIII) are located in the pons. The nuclei of the glossopharyngeal nerve (IX), vagus nerve (X), accessory nerve (XI) and hypoglossal nerve (XII) are located in the medulla. The fibers of these cranial nerves exit the brainstem from these nuclei.
Clinical significance
Diseases of the brainstem can result in abnormalities in the function of cranial nerves that may lead to visual disturbances, pupil abnormalities, changes in sensation, muscle weakness, hearing problems, vertigo, swallowing and speech difficulty, voice change, and co-ordination problems. Localizing neurological lesions in the brainstem may be very precise, although it relies on a clear understanding on the functions of brainstem anatomical structures and how to test them.
Brainstem stroke syndrome can cause a range of impairments including
locked-in syndrome.
Duret haemorrhages are areas of bleeding in the midbrain and upper pons due to a downward traumatic displacement of the brainstem.
Cysts known as
syrinxes can affect the brainstem, in a condition, called
syringobulbia. These fluid-filled cavities can be congenital, acquired or the result of a tumor.
Criteria for claiming
brainstem death in the UK have developed in order to make the decision of when to stop ventilation of somebody who could not otherwise sustain life. These determining factors are that the patient is irreversibly unconscious and incapable of breathing unaided. All other possible causes must be ruled out that might otherwise indicate a temporary condition. The state of irreversible brain damage has to be unequivocal. There are brainstem reflexes that are checked for by two senior doctors so that
imaging technology is unnecessary. The absence of the
cough
A cough is a sudden expulsion of air through the large breathing passages which can help clear them of fluids, irritants, foreign particles and Microorganism, microbes. As a protective reflex, coughing can be repetitive with the cough reflex fol ...
and
gag reflexes, of the
corneal reflex and the
vestibulo-ocular reflex
The vestibulo-ocular reflex (VOR) is a reflex that acts to stabilize Gaze (physiology), gaze during head movement, with eye movement due to activation of the vestibular system, it is also known as the cervico-ocular reflex. The reflex acts to im ...
need to be established; the pupils of the eyes must be fixed and dilated; there must be an absence of motor response to stimulation and an absence of breathing marked by concentrations of carbon dioxide in the arterial blood. All of these tests must be repeated after a certain time before death can be declared.
[Black's Medical Dictionary 39th edition 1999]
Additional images
File:Human brain frontal (coronal) section description.JPG, The midbrain, pons, and medulla oblongata are labelled on this coronal section of the human brain.
File:Human brainstem.gif, 3D visualization of the brainstem in an average human brain
See also
*
Triune brain – reptilian brain
References
External links
*
Comparative Neuroscience at
Wikiversity
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Neurophysiology