Magnetic resonance imaging of the brain uses
magnetic resonance imaging
Magnetic resonance imaging (MRI) is a medical imaging technique used in radiology to generate pictures of the anatomy and the physiological processes inside the body. MRI scanners use strong magnetic fields, magnetic field gradients, and ...
(MRI) to produce high-quality two- or three-dimensional images of the
brain
The brain is an organ (biology), organ that serves as the center of the nervous system in all vertebrate and most invertebrate animals. It consists of nervous tissue and is typically located in the head (cephalization), usually near organs for ...
,
brainstem
The brainstem (or brain stem) is the posterior stalk-like part of the brain that connects the cerebrum with the spinal cord. In the human brain the brainstem is composed of the midbrain, the pons, and the medulla oblongata. The midbrain is conti ...
, and
cerebellum
The cerebellum (: cerebella or cerebellums; Latin for 'little brain') is a major feature of the hindbrain of all vertebrates. Although usually smaller than the cerebrum, in some animals such as the mormyrid fishes it may be as large as it or eve ...
without
ionizing radiation
Ionizing (ionising) radiation, including Radioactive decay, nuclear radiation, consists of subatomic particles or electromagnetic waves that have enough energy per individual photon or particle to ionization, ionize atoms or molecules by detaching ...
(
X-rays
An X-ray (also known in many languages as Röntgen radiation) is a form of high-energy electromagnetic radiation with a wavelength shorter than those of ultraviolet rays and longer than those of gamma rays. Roughly, X-rays have a wavelength ran ...
) or
radioactive tracer
A radioactive tracer, radiotracer, or radioactive label is a synthetic derivative of a natural compound in which one or more atoms have been replaced by a radionuclide (a radioactive atom). By virtue of its radioactive decay, it can be used to ...
s.
History
The first MR images of a human brain were obtained in 1978 by two groups of researchers at
EMI Laboratories led by
Ian Robert Young and Hugh Clow.
In 1986, Charles L. Dumoulin and Howard R. Hart at
General Electric
General Electric Company (GE) was an American Multinational corporation, multinational Conglomerate (company), conglomerate founded in 1892, incorporated in the New York (state), state of New York and headquartered in Boston.
Over the year ...
developed
MR angiography
Magnetic resonance angiography (MRA) is a group of techniques based on magnetic resonance imaging (MRI) to image blood vessels. Magnetic resonance angiography is used to generate images of arteries (and less commonly veins) in order to evaluate ...
,
and
Denis Le Bihan obtained the first images and later patented
diffusion MRI
Diffusion-weighted magnetic resonance imaging (DWI or DW-MRI) is the use of specific MRI sequences as well as software that generates images from the resulting data that uses the diffusion of water molecules to generate contrast (vision), contrast ...
. In 1988,
Arno Villringer and colleagues demonstrated that susceptibility
contrast agents
A contrast agent (or contrast medium) is a substance used to increase the contrast of structures or fluids within the body in medical imaging. Contrast agents absorb or alter external electromagnetism or ultrasound, which is different from radiop ...
may be employed in
perfusion MRI. In 1990,
Seiji Ogawa
Seiji Ogawa (小川 誠二 ''Ogawa Seiji'', born January 19, 1934) is a Japanese biophysicist and neuroscientist known for discovering the technique that underlies Functional Magnetic Resonance Imaging (fMRI). He is regarded as the father of moder ...
at
AT&T Bell labs recognized that oxygen-depleted blood with dHb was attracted to a magnetic field, and discovered the technique that underlies
Functional Magnetic Resonance Imaging
Functional magnetic resonance imaging or functional MRI (fMRI) measures brain activity by detecting changes associated with blood flow. This technique relies on the fact that cerebral blood flow and neuronal activation are coupled. When an area o ...
(fMRI).
In the early 1980s to the early 1990s, 'Jedi' helmets, inspired by the '
Return of the Jedi
''Return of the Jedi'' (also known as ''Star Wars: Episode VI – Return of the Jedi'' is a 1983 American epic space opera film directed by Richard Marquand from a screenplay by Lawrence Kasdan and George Lucas. The sequel to '' The Empire ...
' Star Wars film, were sometimes worn by children in order to obtain good image quality. The copper coils of the helmet were used as a radio aerial to detect the signals while the 'Jedi' association encouraged children to wear the helmets and not be frightened by the procedure. These helmets were no longer needed as MR scanners improved.
In the early 1990s, Peter Basser and Le Bihan, working at
NIH, and Aaron Filler, Franklyn Howe, and colleagues developed
diffusion tensor imaging
Diffusion-weighted magnetic resonance imaging (DWI or DW-MRI) is the use of specific MRI sequences as well as software that generates images from the resulting data that uses the diffusion of water molecules to generate contrast in MR images. It ...
(DTI). Joseph Hajnal, Young and
Graeme Bydder
Graham or Graeme may refer to:
People
* Graham (given name), an English-language given name
* Graham (surname), an English-language surname
* Graeme (surname), an English-language surname
* Graham (musician) (born 1979), Burmese singer
* Clan ...
described the use of
FLAIR
Fluid-attenuated inversion recovery (FLAIR) is a magnetic resonance imaging sequence with an inversion recovery set to null fluids. For example, it can be used in brain imaging to suppress cerebrospinal fluid (CSF) effects on the image, so as to ...
pulse sequence to demonstrate high signal regions in normal white matter in 1992. In the same year, John Detre, Alan P. Koretsky and coworkers developed
arterial spin labeling
Arterial spin labeling (ASL), also known as arterial spin tagging, is a magnetic resonance imaging technique used to quantify cerebral blood perfusion by labelling blood water as it flows throughout the brain. ASL specifically refers to magnetic la ...
. In 1997, Jürgen R. Reichenbach, E. Mark Haacke and coworkers at
Washington University in St. Louis
Washington University in St. Louis (WashU) is a private research university in St. Louis, Missouri, United States. Founded in 1853 by a group of civic leaders and named for George Washington, the university spans 355 acres across its Danforth ...
developed
Susceptibility weighted imaging.
The first study of the human brain at 3.0
T was published in 1994, and in 1998 at 8 T. Studies of the human brain have been performed at 9.4 T (2006) and up to 10.5 T (2019).
Paul Lauterbur
Paul Christian Lauterbur (May 6, 1929 – March 27, 2007) was an American chemist who shared the Nobel Prize in Physiology or Medicine in 2003 with Peter Mansfield for his work which made the development of magnetic resonance imaging (MRI) possi ...
and Sir
Peter Mansfield
Sir Peter Mansfield (9 October 1933 – 8 February 2017) was an English physicist who was awarded the 2003 Nobel Prize in Physiology or Medicine, shared with Paul Lauterbur, for discoveries concerning Magnetic Resonance Imaging (MRI). Mansfie ...
were awarded the 2003
Nobel Prize in Physiology or Medicine
The Nobel Prize in Physiology or Medicine () is awarded yearly by the Nobel Assembly at the Karolinska Institute for outstanding discoveries in physiology or medicine. The Nobel Prize is not a single prize, but five separate prizes that, acco ...
for their discoveries concerning MRI.

The record for the highest spatial resolution of a whole intact brain (postmortem) is 100 microns, from Massachusetts General Hospital. The data was published in ''Scientific Data'' on 30 October 2019.
Applications
One advantage of MRI of the brain over
computed tomography of the head is better tissue contrast,
and it has fewer artifacts than CT when viewing the
brainstem
The brainstem (or brain stem) is the posterior stalk-like part of the brain that connects the cerebrum with the spinal cord. In the human brain the brainstem is composed of the midbrain, the pons, and the medulla oblongata. The midbrain is conti ...
. MRI is also superior for
pituitary
The pituitary gland or hypophysis is an endocrine gland in vertebrates. In humans, the pituitary gland is located at the base of the brain, protruding off the bottom of the hypothalamus. The pituitary gland and the hypothalamus control much of th ...
imaging.
It may however be less effective at identifying early
cerebritis
Cerebritis is the inflammation of the cerebrum, which performs a number of important functions, such as memory and speech. It is also defined as a purulent nonencapsulated parenchymal infection of the brain which is characterized by nonspecif ...
.
In the case of a
concussion
A concussion, also known as a mild traumatic brain injury (mTBI), is a head injury that temporarily affects brain functioning. Symptoms may include headache, dizziness, difficulty with thinking and concentration, sleep disturbances, a brief ...
, an MRI should be avoided unless there are progressive neurological symptoms, focal neurological findings or concern of skull fracture on exam.
In the analysis of a concussion, measurements of Fractional Anisotropy, Mean Diffusivity, Cerebral Blood Flow, and Global Connectivity can be taken to observe the pathophysiological mechanisms being made while in recovery.
In analysis of the
fetal brain, MRI provides more information about gyration than
ultrasound
Ultrasound is sound with frequency, frequencies greater than 20 Hertz, kilohertz. This frequency is the approximate upper audible hearing range, limit of human hearing in healthy young adults. The physical principles of acoustic waves apply ...
.
MRI is sensitive for the detection of brain abscess.
A number of different imaging modalities or
sequences
In mathematics, a sequence is an enumerated collection of objects in which repetitions are allowed and order matters. Like a set, it contains members (also called ''elements'', or ''terms''). The number of elements (possibly infinite) is call ...
can be used with imaging the nervous system:
*
''T''1-weighted (T1W) images:
Cerebrospinal fluid
Cerebrospinal fluid (CSF) is a clear, colorless Extracellular fluid#Transcellular fluid, transcellular body fluid found within the meninges, meningeal tissue that surrounds the vertebrate brain and spinal cord, and in the ventricular system, ven ...
is dark.
''T''1-weighted images are useful for visualizing normal anatomy.
*
''T''2-weighted (T2W) images: CSF is light, but fat (and thus
white matter
White matter refers to areas of the central nervous system that are mainly made up of myelinated axons, also called Nerve tract, tracts. Long thought to be passive tissue, white matter affects learning and brain functions, modulating the distr ...
) is darker than with ''T''
1.
''T''2-weighted images are useful for visualizing pathology.
*
Diffusion-weighted images (DWI): DWI uses the diffusion of water molecules to generate contrast in MR images.
* Proton density (PD) images: CSF has a relatively high level of
proton
A proton is a stable subatomic particle, symbol , Hydron (chemistry), H+, or 1H+ with a positive electric charge of +1 ''e'' (elementary charge). Its mass is slightly less than the mass of a neutron and approximately times the mass of an e ...
s, making CSF appear bright.
Gray matter
Grey matter, or gray matter in American English, is a major component of the central nervous system, consisting of neuronal cell bodies, neuropil (dendrites and unmyelinated axons), glial cells (astrocytes and oligodendrocytes), synapses, and ...
is brighter than white matter.

*
Fluid attenuation inversion recovery (
FLAIR
Fluid-attenuated inversion recovery (FLAIR) is a magnetic resonance imaging sequence with an inversion recovery set to null fluids. For example, it can be used in brain imaging to suppress cerebrospinal fluid (CSF) effects on the image, so as to ...
): useful for evaluation of
white matter
White matter refers to areas of the central nervous system that are mainly made up of myelinated axons, also called Nerve tract, tracts. Long thought to be passive tissue, white matter affects learning and brain functions, modulating the distr ...
plaques near the ventricles.
It is useful in identifying
demyelination.
Diagnostic Usage
MRI of the brain and head has multiple diagnostic usages, including identifying aneurysms, strokes, tumors and other brain injury. In many diseases, such as
Parkinson's
Parkinson's disease (PD), or simply Parkinson's, is a neurodegenerative disease primarily of the central nervous system, affecting both motor and non-motor systems. Symptoms typically develop gradually and non-motor issues become more prevalen ...
or
Alzheimer's
Alzheimer's disease (AD) is a neurodegenerative disease and the cause of 60–70% of cases of dementia. The most common early symptom is difficulty in remembering recent events. As the disease advances, symptoms can include problems wit ...
, MRI is useful to help
differentially diagnose against other diseases.
On the topic of diagnosis, MRI data has been used with
deep learning networks to identify
brain tumor
A brain tumor (sometimes referred to as brain cancer) occurs when a group of cells within the Human brain, brain turn cancerous and grow out of control, creating a mass. There are two main types of tumors: malignant (cancerous) tumors and benign ...
s.
See also
*
Human Connectome Project
*
History of neuroimaging
Gallery
Image:Brain regions on T1 MRI.png, Brain regions on T1 MRI
Image:Falxmeningeom MRT T1 mit Kontrastmittel.jpg, T1 (note CSF is dark) with contrast (arrow pointing to meningioma of the falx)
Image:Brain-T2-axial.png, Normal axial T2-weighted MR image of the brain
Image:MRI brain surface normal.jpg, MRI image of the surface of the brain.
References
{{Medical imaging
Magnetic resonance imaging
Neuroimaging