Transition, in
genetics and
molecular biology, refers to a
point mutation that changes a
purine nucleotide to another purine (
A ↔
G), or a
pyrimidine
Pyrimidine (; ) is an aromatic, heterocyclic, organic compound similar to pyridine (). One of the three diazines (six-membered heterocyclics with two nitrogen atoms in the ring), it has nitrogen atoms at positions 1 and 3 in the ring. The other ...
nucleotide to another pyrimidine (
C ↔
T). Approximately two out of three
single nucleotide polymorphism
In genetics, a single-nucleotide polymorphism (SNP ; plural SNPs ) is a germline substitution of a single nucleotide at a specific position in the genome. Although certain definitions require the substitution to be present in a sufficiently larg ...
s (SNPs) are transitions.
Transitions can be caused by
oxidative deamination Oxidative deamination is a form of deamination that generates α-keto acids and other oxidized products from amine-containing compounds, and occurs primarily in the liver. Oxidative deamination is stereospecific, meaning it contains different stere ...
and
tautomerization
Tautomers () are structural isomers (constitutional isomers) of chemical compounds that readily interconvert.
The chemical reaction interconverting the two is called tautomerization. This conversion commonly results from the relocation of a hydr ...
. Although there are twice as many possible
transversions
Transversion, in molecular biology, refers to a point mutation in DNA in which a single (two ring) purine ( A or G) is changed for a (one ring) pyrimidine ( T or C), or vice versa. A transversion can be spontaneous, or it can be caused by ioni ...
, transitions appear more often in
genomes, possibly due to the molecular mechanisms that generate them.
5-Methylcytosine is more prone to transition than unmethylated
cytosine, due to spontaneous
deamination. This mechanism is important because it dictates the rarity of
CpG islands
The CpG sites or CG sites are regions of DNA where a cytosine nucleotide is followed by a guanine nucleotide in the linear sequence of bases along its 5' → 3' direction. CpG sites occur with high frequency in genomic regions called CpG isl ...
.
See also
*
Transversion
References
External links
Diagram at mun.ca
Mutation
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