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4,5-Dihydroxy-2,3-pentanedione (DPD) is an
organic compound Some chemical authorities define an organic compound as a chemical compound that contains a carbon–hydrogen or carbon–carbon bond; others consider an organic compound to be any chemical compound that contains carbon. For example, carbon-co ...
that occurs naturally but exists as several related structures. The idealized formula for this species is CH3C(O)C(O)CH(OH)CH2OH, but it is known to exist as several other forms resulting from cyclization. It is not stable at room temperature as a pure material, which has further complicated its analysis. The (''S'')-stereoisomer occurs naturally. It is typically hydrated, i.e., one
keto group In organic chemistry, a ketone is an organic compound with the structure , where R and R' can be a variety of carbon-containing substituents. Ketones contain a carbonyl group (a carbon-oxygen double bond C=O). The simplest ketone is acetone ( ...
has added water to give the
geminal diol A geminal diol (or gem-diol for short) is any organic compound having two hydroxyl functional groups () bound to the same carbon atom. Geminal diols are a subclass of the diols, which in turn are a special class of alcohols. Most of the geminal ...
. DPD is produced by degradation of ''S''-adenosylhomocysteine by the action of the enzyme ''S''-ribosylhomocysteinase. The compound probably does not exist as depicted above, but as an equilibrium mixture of three hydrates. DPD reacts with
boric acid Boric acid, more specifically orthoboric acid, is a compound of boron, oxygen, and hydrogen with formula . It may also be called hydrogen orthoborate, trihydroxidoboron or boracic acid. It is usually encountered as colorless crystals or a white ...
to form a borate diester known as
autoinducer-2 Autoinducer-2 (AI-2) is a furanosyl borate diester or tetrahydroxy furan (species dependent) that—as the name suggests—is an autoinducer, a member of a family of signaling molecules used in quorum sensing. AI-2 is one of only a few known biom ...
(AI-2). AI-2 is a
signaling molecule In biology, cell signaling (cell signalling in British English) is the Biological process, process by which a Cell (biology), cell interacts with itself, other cells, and the environment. Cell signaling is a fundamental property of all Cell (biol ...
used for bacterial
quorum sensing In biology, quorum sensing or quorum signaling (QS) is the process of cell-to-cell communication that allows bacteria to detect and respond to cell population density by gene regulation, typically as a means of acclimating to environmental disadv ...
. It is produced and recognized by many
Gram-negative Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists ...
and
Gram-positive bacteria In bacteriology, gram-positive bacteria are bacteria that give a positive result in the Gram stain test, which is traditionally used to quickly classify bacteria into two broad categories according to their type of cell wall. The Gram stain ...
. AI-2 is synthesized by the reaction of DPD with
boric acid Boric acid, more specifically orthoboric acid, is a compound of boron, oxygen, and hydrogen with formula . It may also be called hydrogen orthoborate, trihydroxidoboron or boracic acid. It is usually encountered as colorless crystals or a white ...
and is recognized by the two-component sensor kinase LuxPQ in
Vibrionaceae The Vibrionaceae are a family of Pseudomonadota given their own order, Vibrionales. Inhabitants of fresh or salt water, several species are pathogenic, including the type species ''Vibrio cholerae'', which is the agent responsible for cholera. Mo ...
.


References

{{DEFAULTSORT:Dihydroxy-2, 3-pentanedione, 4, 5- Diketones Vicinal diols Carbohydrate chemistry Tetrahydrofurans Acyloins Beta-hydroxy ketones Conjugated ketones